Patents by Inventor Jong Shin Yoo

Jong Shin Yoo has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 11215620
    Abstract: The preset invention relates to a high resolution mass spectrometry based novel bioinformatics platform for the identification of glycation proteins and advanced glycation end-product. Particularly, the bioinformatics platform of the present invention facilitates an efficient and accurate investigation of quantitative changes of glycation proteins and advanced glycation end-products which are included in various types of samples but had not been informed yet, and uses a high resolution mass spectrometry, and thereby can be effectively used for the prediction or diagnosis of a disease including cancer by examining a disease marker in a sample.
    Type: Grant
    Filed: March 7, 2019
    Date of Patent: January 4, 2022
    Assignee: KOREA BASIC SCIENCE INSTITUTE
    Inventors: Jin Young Kim, Gun Wook Park, Eun Sun Ji, Jong Shin Yoo
  • Patent number: 11181531
    Abstract: The present invention relates to a bioinformation processing analysis method for the identification and quantification of O-linked glycopeptide using high resolution mass spectrum. Particularly, according to the bioinformation processing analysis method of the present invention, the quantitative changes of O-linked glycopeptide containing non-informed sugar chains included in various samples can be efficiently and accurately analyzed; the prediction or diagnosis of disease including cancer can be made easy by using a high resolution mass spectrometer; or the investigation of O-linked glycopeptide structure of a therapeutic glycoprotein can be efficiently achieved.
    Type: Grant
    Filed: December 15, 2017
    Date of Patent: November 23, 2021
    Assignee: Korea Basic Science Institute
    Inventors: Gun Wook Park, Jong Shin Yoo, Jin Young Kim, Ju Yeon Lee, Hyun Kyoung Lee
  • Publication number: 20200408774
    Abstract: The present invention relates to a bioinformation processing analysis method for the identification and quantification of O-linked glycopeptide using high resolution mass spectrum. Particularly, according to the bioinformation processing analysis method of the present invention, the quantitative changes of O-linked glycopeptide containing non-informed sugar chains included in various samples can be efficiently and accurately analyzed; the prediction or diagnosis of disease including cancer can be made easy by using a high resolution mass spectrometer; or the investigation of O-linked glycopeptide structure of a therapeutic glycoprotein can be efficiently achieved.
    Type: Application
    Filed: December 15, 2017
    Publication date: December 31, 2020
    Applicant: Korea Basic Science Institute
    Inventors: Gun Wook PARK, Jong Shin YOO, Jin Young KIM, Ju Yeon LEE, Hyun Kyoung LEE
  • Patent number: 10697971
    Abstract: The present invention relates to a diagnosis method of liver cancer using mass spectrometry of ?-fetoprotein derived glycopeptide. Particularly, according to the AFP glycopeptide analysis method of the invention, fucosylation rate of the glycopeptide having the sequence composed of Val-Asn-Phe-Thr-Glu-Ile-Gln-Lys is analyzed to diagnose liver cancer in the early developmental grade. In particular, fucosylation rate is higher in the liver cancer patients than in other liver disease patients, so that the comparison of the fucosylation rate can be useful to diagnose or distinguish liver cancer from other liver diseases in the early HCC patients.
    Type: Grant
    Filed: April 27, 2017
    Date of Patent: June 30, 2020
    Assignee: KOREA BASIC SCIENCE INSTITUTE
    Inventors: Jong Shin Yoo, Kwang Hoe Kim, Jin Young Kim, Ju Yeon Lee
  • Publication number: 20200018759
    Abstract: The present invention relates to a diagnosis method of liver cancer using mass spectrometry of ?-fetoprotein derived glycopeptide. Particularly, according to the AFP glycopeptide analysis method of the invention, fucosylation rate of the glycopeptide having the sequence composed of Val-Asn-Phe-Thr-Glu-Ile-Gln-Lys is analyzed to diagnose liver cancer in the early developmental grade. In particular, fucosylation rate is higher in the liver cancer patients than in other liver disease patients, so that the comparison of the fucosylation rate can be useful to diagnose or distinguish liver cancer from other liver diseases in the early HCC patients.
    Type: Application
    Filed: April 27, 2017
    Publication date: January 16, 2020
    Applicant: KOREA BASIC SCIENCE INSTITUTE
    Inventors: Jong Shin Yoo, Kwang Hoe Kim, Jin Young Kim, Ju Yeon Lee
  • Publication number: 20190285645
    Abstract: The preset invention relates to a high resolution mass spectrometry based novel bioinformatics platform for the identification of glycation proteins and advanced glycation end-product. Particularly, the bioinformatics platform of the present invention facilitates an efficient and accurate investigation of quantitative changes of glycation proteins and advanced glycation end-products which are included in various types of samples but had not been informed yet, and uses a high resolution mass spectrometry, and thereby can be effectively used for the prediction or diagnosis of a disease including cancer by examining a disease marker in a sample.
    Type: Application
    Filed: March 7, 2019
    Publication date: September 19, 2019
    Inventors: Jin Young Kim, Gun Wook Park, Eun Sun Ji, Jong Shin Yoo
  • Patent number: 9436797
    Abstract: The present invention relates to a more efficient and accurate method for the identification and quantification of comparatively low abundant glycopeptides, compared with general peptides, using mass spectrum obtained by using high resolution mass spectrometer. Therefore, the method of the present invention can be effectively used for the techniques for identification of biotherapeutics and diagnosis of cancer or disease by screening glycopeptide, the disease marker (Biomarker), from various samples.
    Type: Grant
    Filed: January 22, 2013
    Date of Patent: September 6, 2016
    Assignee: Korea Basic Science Institute
    Inventors: Gun Wook Park, Jong Shin Yoo, Jin Young Kim, Ju Yeon Lee, Hyun Kyoung Lee, Hyun Joo An, Jae-Han Kim
  • Patent number: 9129784
    Abstract: A Fourier transform ion cyclotron resonance mass spectrometer (FT-ICR MS) includes: an ionization source generating ions; a deceleration lens, on which the ions generated by the ionization source and spatially dispersed are incident, selectively decelerating the incident ions so as to decrease the distance between the ions; and an ion cyclotron resonance cell on which the ions passing through the deceleration lens are incident. By preventing dispersing of ions due to mass difference and converging the ions using the deceleration lens, the mass range that can be measured at one time can be extended. Also, measurement sensitivity can be improved since the ions are effectively introduced to the ICR cell.
    Type: Grant
    Filed: November 21, 2011
    Date of Patent: September 8, 2015
    Assignee: KOREA BASIC SCIENCE INSTITUTE
    Inventors: Myoung Choul Choi, A Leum Park, Hyun Sik Kim, Seung Yong Kim, Jong Shin Yoo
  • Publication number: 20150186595
    Abstract: The present invention relates to a more efficient and accurate method for the identification and quantification of comparatively low abundant glycopeptides, compared with general peptides, using mass spectrum obtained by using high resolution mass spectrometer. Therefore, the method of the present invention can be effectively used for the techniques for identification of biotherapeutics and diagnosis of cancer or disease by screening glycopeptide, the disease marker (Biomarker), from various samples.
    Type: Application
    Filed: January 22, 2013
    Publication date: July 2, 2015
    Inventors: Gun Wook Park, Jong Shin Yoo, Jin Young Kim, Ju Yeon Lee, Hyun Kyoung Lee, Hyun Joo An, Jae-Han Kim
  • Publication number: 20150147765
    Abstract: The present invention relates to a method for diagnosing cancer using information on the aberrant glycosylation of a glycoprotein involved in cancer progress. More particularly, the present invention relates to a cancer diagnosis peptide marker which is screened by the steps of: separating a glycoprotein aberrantly glycosylated according to the occurrence and progress of cancer from the blood of a lung cancer patient by using lectin; and selecting a marker peptide produced by the hydrolysis of the glycoprotein isolated by lectin. The marker peptide can be effectively used as a cancer diagnosis marker and for the diagnosis of cancer.
    Type: Application
    Filed: June 13, 2014
    Publication date: May 28, 2015
    Inventors: Yeong Hee Ahn, Jong Shin Yoo, Eun Sun Ji
  • Publication number: 20140335535
    Abstract: The present invention relates to a peptide marker for cancer diagnosis and a cancer diagnosis method using the same, more precisely to a peptide marker for cancer diagnosis screened by the following steps: separating and concentrating glycoproteins including a certain glycan chain related to the occurrence of cancer; hydrolyzing the glycoproteins to obtain polypeptides; and quantitatively analyzing the polypeptides to identify certain polypeptides that can track quantitative changes in glycoproteins glycosylated in a specific manner by the occurrence of cancer, and to a cancer diagnosis method using the said peptide marker.
    Type: Application
    Filed: March 12, 2014
    Publication date: November 13, 2014
    Applicant: Korea Basic Science Institute
    Inventors: Yeong Hee AHN, Jong Shin YOO
  • Patent number: 8796618
    Abstract: The present invention relates to an apparatus and method for controlling a pipeline-type ion cyclotron resonance mass spectrometer, in which an ion trap unit of the ion cyclotron resonance mass spectrometer is capable of using two digitizers at the same time, thus enabling a measurement process for detecting an electrical signal which indicates the mass of ions corresponding to a specific purpose, and another measurement process for detecting another electrical signal which indicates the mass of ions corresponding to another specific purpose, to be simultaneously performed. Accordingly, it is an aim of the present invention to provide an apparatus and method for controlling a pipeline-type ion cyclotron resonance mass spectrometer, which can overcome the problems of time delay among control procedures, and can present a signal detection step wherein an excitation electrode is utilized to improve the sensitivity and speed of signal detection.
    Type: Grant
    Filed: November 16, 2010
    Date of Patent: August 5, 2014
    Assignee: Korea Basic Science Institute
    Inventors: Seung Yong Kim, Hyun Sik Kim, Jong Shin Yoo
  • Patent number: 8723112
    Abstract: Provided are a controller and a control method for improving signal performance of an ion cyclotron resonance mass spectrometer. The controller and control method apply electric signals for causing ions injected into an ion trap of the ion cyclotron resonance mass spectrometer to be injected to the center of the trap as close as possible to trap electrodes, and adjust biased ion motion by appropriately adjusting signals of trap electrodes for causing the injected ions to make ion motion, thereby improving the fidelity of ion signals. The control method for improving signal performance of an ion cyclotron resonance mass spectrometer includes an ion position adjustment process and an ion signal detection process.
    Type: Grant
    Filed: October 31, 2011
    Date of Patent: May 13, 2014
    Assignee: Korea Basic Science Institute
    Inventors: Seung Yong Kim, Hyun Sik Kim, Myoung Choul Choi, Jong Shin Yoo
  • Patent number: 8623667
    Abstract: The present invention relates to a method for diagnosing cancer using information on aberrant glycosylation of glycoproteins, which is related with cancer progression. More particularly, the present invention relates to a peptide marker for cancer diagnosis and a method for diagnosing cancer using the peptide marker, wherein glycoproteins aberrantly glycosylated due to cancer incidence and progression is isolated using lectin; and marker peptides generated by hydrolysis of the glycoproteins isolated by the lectin is selected and quantified.
    Type: Grant
    Filed: May 3, 2012
    Date of Patent: January 7, 2014
    Assignee: Korea Basic Science Institute
    Inventors: Yeong Hee Ahn, Jong Shin Yoo, Park Min Shin, Eun Sun Ji
  • Patent number: 8580491
    Abstract: The present invention relates to a method for diagnosing cancer using information on the aberrant glycosylation of a glycoprotein. More precisely, the present invention relates to a cancer diagnosis peptide marker, which is screened by: a step of separating, using a lectin, a glycoprotein which is aberrantly glycosylated in accordance with the occurrence of cancer; and a step of selecting a hydrolyzed peptide marker derived from the aberrantly glycosylated glycoprotein by observing the quantitative changes in the separated glycoprotein. The present invention also relates to a method for diagnosing cancer using the peptide marker as an agent.
    Type: Grant
    Filed: December 24, 2010
    Date of Patent: November 12, 2013
    Assignee: Korea Basic Science Institute
    Inventors: Yeong Hee Ahn, Jong Shin Yoo
  • Publication number: 20130261015
    Abstract: A method for diagnosing cancer using information on aberrant glycosylation of glycoproteins, which is related with cancer progression. More particularly, the present invention relates to a peptide marker for cancer diagnosis and a method for diagnosing cancer using the peptide marker, wherein glycoproteins aberrantly glycosylated due to cancer incidence and progression is isolated using lectin; and marker peptides generated by hydrolysis or the glycoproteins isolated by the lectin is selected and quantified.
    Type: Application
    Filed: March 26, 2013
    Publication date: October 3, 2013
    Applicant: Korea Basic Science Institute
    Inventors: Yeong Hee AHN, Jong Shin YOO, Park Min SHIN
  • Publication number: 20130228681
    Abstract: A Fourier transform ion cyclotron resonance mass spectrometer (FT-ICR MS) includes: an ionization source generating ions; a deceleration lens, on which the ions generated by the ionization source and spatially dispersed are incident, selectively decelerating the incident ions so as to decrease the distance between the ions; and an ion cyclotron resonance cell on which the ions passing through the deceleration lens are incident. By preventing dispersing of ions due to mass difference and converging the ions using the deceleration lens, the mass range that can be measured at one time can be extended. Also, measurement sensitivity can be improved since the ions are effectively introduced to the ICR cell.
    Type: Application
    Filed: November 21, 2011
    Publication date: September 5, 2013
    Applicant: KOREA BASIC SCIENCE INSTITUTE
    Inventors: Myoung Choul Choi, A Leum Park, Hyun Sik Kim, Seung Yong Kim, Jong Shin Yoo
  • Patent number: 8518712
    Abstract: A method for discovering pharmacologically active substances from natural products at high speed, including: obtaining an activity profile by testing pharmacological activity of a plurality of samples; obtaining mass profiles based on mass spectra resulting from analysis of the samples by mass spectrometry; and determining molecular weight of pharmacologically active substances by comparing and analyzing the activity profile and the mass profile. The method allows fast discovery of pharmacologically active substances by performing high resolution mass spectrometry for numerous components included in an extract sample of natural products and comparing with the activity test data. The information about the intensity of the activity of the pharmacologically active substances of the natural products allows effective utilization of the natural products.
    Type: Grant
    Filed: June 29, 2012
    Date of Patent: August 27, 2013
    Assignee: Korea Basic Science Institute
    Inventors: Kyu Hwan Park, Hyun Sik Kim, Kyung Hoon Kwon, Jong Shin Yoo
  • Patent number: 8513596
    Abstract: An apparatus for electrospray ionization may include: a platform including an inlet port, a first channel connected to the inlet port, a second channel connected to the first channel, and an outlet port connected to the second channel; a nebulizer provided in the first channel and configured to spray inert gas to a sample sprayed into the first channel through the inlet port; and a focusing lens provided in the second channel and configured to focus ions produced from the sprayed sample toward the outlet port.
    Type: Grant
    Filed: December 23, 2010
    Date of Patent: August 20, 2013
    Assignee: Korea Basic Science Institute
    Inventors: Duk Jin Kang, Myoung Choul Choi, Jong Shin Yoo, Hyun Sik Kim
  • Patent number: 8440966
    Abstract: A Fourier transform ion cyclotron resonance mass spectrometer (FT-ICR MS) is provided. A preamplifier is installed as nearest to an ion cyclotron resonance (ICR) trap as possible at a detector part in the mass spectrometer, and thermal noise generated at the preamplifier is minimized by means of a cryo-cooling system to increase a signal-to-noise ratio of ion detection signals such that an ultra-low amount of specimen can be detected, which was impossible in the related art.
    Type: Grant
    Filed: December 29, 2008
    Date of Patent: May 14, 2013
    Assignee: Korea Basic Science Institute
    Inventors: Myoung Choul Choi, Yeon Suk Choi, Jeong Min Lee, Seung Yong Kim, Dong Lak Kim, Hyun Sik Kim, Jong Shin Yoo, Stefan Karl-Heinz Stahl