Patents by Inventor Jorg Siebenmorgen
Jorg Siebenmorgen has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).
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Patent number: 10295814Abstract: A microscope including an illumination objective with a first optical axis, embodied to produce a light sheet, and a detection objective with a second optical axis, embodied to detect light coming from the specimen plane. The illumination objective and the detection objective are aligned relative to one another and the specimen plane so that the first and second optical axes intersect in the specimen plane and include a substantially right angle therebetween. The optical axes each include an angle which differs from zero with a reference axis directed orthogonal to the specimen plane. An overview illumination apparatus for wide-field illumination of the specimen plane, includes an illumination optical unit with a third optical axis. The characterizing feature is that the detection objective is provided to detect both light from the light sheet and light from the illumination optical unit. A method is also provided for operating a light sheet microscope.Type: GrantFiled: March 20, 2017Date of Patent: May 21, 2019Assignee: Carl Zeiss Microscopy GmbHInventors: Jörg Siebenmorgen, Helmut Lippert, Thomas Kalkbrenner
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Publication number: 20190101740Abstract: An arrangement and method for supplying immersion media and a method for setting optical parameters of a medium, includes a media supply unit for the controlled supply of a medium or of a mixture into a contact region between an optical lens and a specimen slide, on which a specimen may be arranged. An image capture unit is provided for capturing image data on the basis of detection radiation from the object space along a detection beam path extending through the contact region. An evaluation unit is provided to establish current image parameters on the basis of captured image data, to compare said current image parameters to intended image parameters and to establish a desired mixing ratio of at least two components of the medium depending on the comparison.Type: ApplicationFiled: September 26, 2018Publication date: April 4, 2019Applicant: Carl Zeiss Microscopy GmbHInventors: Thomas KALKBRENNER, Sebastian Borck, Jörg Siebenmorgen
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Publication number: 20190056579Abstract: A method for operating a microscopy arrangement, and a microscopy arrangement, having a first microscope and at least one further microscope, wherein each of the microscopes have a respective optical axis. The respective optical axes do not coincide. The method provides a three-dimensional reference coordinate system being set; a carrier apparatus, that is embodied in the arrangement to receive and hold a specimen carrier is introduced into a specimen plane of the first microscope that is intersected by the optical axis and onto the optical axis of the first microscope; a reference point is set on the optical axis of the first microscope; the carrier apparatus is delivered to the further microscope, wherein the current coordinates of the reference point are continuously captured and compared to the coordinates of the optical axis of the at least one further microscope; and the reference point is brought onto the optical axis of the at least one further microscope.Type: ApplicationFiled: August 14, 2018Publication date: February 21, 2019Inventors: Thomas Kalkbrenner, Saskia Pergande, Jörg Siebenmorgen, Helmut Lippert
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Patent number: 10048478Abstract: An optical transmission system configured to image a selected region of a sample arranged in a first medium in an object plane on or in a sample carrier, which includes plane-parallel plate, from the object plane into an intermediate image plane in a second medium. The plane-parallel plate is located between the optical transmission system and the sample during the imaging. The object plane and the intermediate image plane form an angle between 0° and 90° with an optical axis of the transmission system. The optical transmission system is positioned relative to region of the sample such that the sample is located within the focal length of the lens of the optical transmission system closest to the sample. The intermediate image plane and the object plane are located on the same side of the optical transmission system, and the intermediate image is a virtual image.Type: GrantFiled: November 13, 2014Date of Patent: August 14, 2018Assignee: Carl Zeiss Microscopy GmbHInventors: Artur Degen, Michael Gölles, Jörg Siebenmorgen, Helmut Lippert, Thomas Kalkbrenner, Ingo Kleppe, Matthias Wald, Lars-Christian Wittig, Wolfgang Singer, Ralf Wolleschensky
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Patent number: 10031325Abstract: An arrangement for light sheet microscopy that includes a means for scanning a sample volume with a light sheet, which includes an angle ??90° with the optical axis of an objective. The light sheet passes through the entire sample volume in the propagation direction, and the depth of field Sobj of the objective is less than the optical-axis depth T of this sample volume. An optical device, disposed downstream of the objective, increases the depth of field Sobj to a depth of field Seff?the depth T of this sample volume. The arrangement also includes a means for positioning the sample volume within the region of the depth of field Seff. A spatially resolving optoelectronic area sensor is disposed downstream of the optical device, and hardware and software are provided to generate sample-volume images from the electronic image signals output by the area sensor.Type: GrantFiled: February 19, 2015Date of Patent: July 24, 2018Assignee: Carl Zeiss Microscopy GmbHInventors: Tiemo Anhut, Thomas Kalkbrenner, Daniel Schwedt, Jörg Siebenmorgen, Helmut Lippert
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Patent number: 10024793Abstract: A three-dimensional high-resolution localization microscopy method including illuminating a sample by excitation radiation to excite fluorescence markers in the sample to luminesce, and imaging the sample in an image frame via imaging optics along an imaging direction, wherein the image frame contains images of the luminescing fluorescence markers, and the imaging optics have a plane of focus and an optical resolution. The excitation step and imaging steps are repeated multiple times to generate a plurality of image frames, wherein the excitation steps are performed to isolate the images of the luminescing fluorescence markers in each image frame for at least some of the luminescing fluorescence markers. The location of the corresponding fluorescence marker is determined in each instance in the generated plurality of image frames from the isolated images of the luminescing fluorescence markers, and a highly resolved total image is generated from the locations determined in this way.Type: GrantFiled: May 13, 2014Date of Patent: July 17, 2018Assignee: Carl Zeiss Microscopy GmbHInventors: Jörg Ritter, Jörg Siebenmorgen, Thomas Kalkbrenner
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Publication number: 20180164564Abstract: A beam shaping assembly has a device for generating a collimated radiation, which contains, in the beam path of the collimated radiation in a space domain a diffraction device for generating a non-diffraction-limited beam, and in a frequency domain a modification device for converting the non-diffraction-limited beam. The present invention furthermore relates to a method for beam shaping and to an assembly for light sheet microscopy. A corresponding method for beam shaping of a modified non-diffraction-limited beam and an assembly for light sheet microscopy which contains a beam shaping assembly.Type: ApplicationFiled: May 25, 2016Publication date: June 14, 2018Inventor: Dr. Jorg SIEBENMORGEN
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Publication number: 20180149854Abstract: An arrangement and method for light sheet microscopy. The arrangement has an illumination apparatus for producing a light sheet for illuminating a stripe of a specimen, and has a detection apparatus for detecting fluorescence radiation emitted by the specimen. The recording speed of the arrangement is increased by an illumination apparatus which is configured to produce at least one further light sheet that is arranged parallel to a first light sheet for illuminating a further stripe of the specimen, and advantageously by a detection apparatus which is configured for the simultaneous detection of the fluorescence radiation excited by the light sheets that are arranged parallel to one another.Type: ApplicationFiled: May 25, 2016Publication date: May 31, 2018Applicant: Carl Zeiss Microscopy GmbHInventors: Jörg Siebenmorgen, Helmut LIPPERT, Thomas KALKBRENNER, Ingo Kleppe, Ralf Wolleschensky
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Patent number: 9804378Abstract: An arrangement for light sheet microscopy including illumination optics with an illumination objective for illuminating a sample, located in a medium on a sample carrier aligned with respect to a plane reference surface, with a light sheet. The arrangement also includes detection optics with a detection objective. The arrangement further includes a separating layer system with at least one layer separating the medium from the illumination and detection objectives. The separating layer system contacts the medium by a base surface aligned parallel to the reference surface. A correction lens system, with at least one correction lens serving to reduce those aberrations which occur as a result of the oblique passage of illumination light and/or of light to be detected through interfaces of the separating layer system, is arranged between illumination objective and separating layer system and/or between detection objective and separating layer system.Type: GrantFiled: November 13, 2014Date of Patent: October 31, 2017Assignee: Carl Zeiss Microscopy GmbHInventors: Wolfgang Singer, David Shafer, Artur Degen, Jörg Siebenmorgen
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Publication number: 20170269345Abstract: A microscope including an illumination objective with a first optical axis, embodied to produce a light sheet, and a detection objective with a second optical axis, embodied to detect light coming from the specimen plane. The illumination objective and the detection objective are aligned relative to one another and the specimen plane so that the first and second optical axes intersect in the specimen plane and include a substantially right angle therebetween. The optical axes each include an angle which differs from zero with a reference axis directed orthogonal to the specimen plane. An overview illumination apparatus for wide-field illumination of the specimen plane, includes an illumination optical unit with a third optical axis. The characterizing feature is that the detection objective is provided to detect both light from the light sheet and light from the illumination optical unit. A method is also provided for operating a light sheet microscope.Type: ApplicationFiled: March 20, 2017Publication date: September 21, 2017Applicant: Carl Zeiss Microscopy GmbHInventors: Jörg Siebenmorgen, Helmut Lippert, Thomas Kalkbrenner
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Publication number: 20170160529Abstract: The invention relates to a light microscope for examining microscopic objects with high throughput. The microscope comprises a light source for illuminating a measuring zone, a sample vessel, in which the microscopic objects can be successively moved into the measuring zone, and a detection device for measuring detection light, which originates from a microscopic object located in the measuring zone. According to the invention, the microscope is characterized in that the imaging means comprise a detection lens having a stationary front optics and movable focusing optics, wherein the focusing optics is arranged behind the front optics and in front of an intermediate image plane, and can be adjusted for the height adjustment of a detection plane. The invention further relates to a corresponding microscopy method.Type: ApplicationFiled: October 15, 2014Publication date: June 8, 2017Applicants: Carl Zeiss Microscopy GmbH, Max-Planck-Gesellschaft zur Förderung der Wissenschaften e.V.Inventors: Helmut Lippert, Jörg Siebenmorgen, Jan Huisken, Florian Fahrbach
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Publication number: 20170068080Abstract: An arrangement for light sheet microscopy that includes a means for scanning a sample volume with a light sheet, which includes an angle ??90° with the optical axis of an objective. The light sheet passes through the entire sample volume in the propagation direction, and the depth of field Sobj of the objective is less than the optical-axis depth T of this sample volume. An optical device, disposed downstream of the objective, increases the depth of field Sobj to a depth of field Seff?the depth T of this sample volume. The arrangement also includes a means for positioning the sample volume within the region of the depth of field Seff. A spatially resolving optoelectronic area sensor is disposed downstream of the optical device, and hardware and software are provided to generate sample-volume images from the electronic image signals output by the area sensor.Type: ApplicationFiled: February 19, 2015Publication date: March 9, 2017Applicant: Carl-Zeiss Microscopy GmbHInventors: Tiemo Anhut, Thomas Kalkbrenner, Daniel Schwedt, Jörg SIEBENMORGEN, Helmut Lippert
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Publication number: 20160291304Abstract: An arrangement for light sheet microscopy including illumination optics with an illumination objective for illuminating a sample, located in a medium on a sample carrier aligned with respect to a plane reference surface, with a light sheet. The arrangement also includes detection optics with a detection objective. The arrangement further includes a separating layer system with at least one layer separating the medium from the illumination and detection objectives. The separating layer system contacts the medium by a base surface aligned parallel to the reference surface. A correction lens system, with at least one correction lens serving to reduce those aberrations which occur as a result of the oblique passage of illumination light and/or of light to be detected through interfaces of the separating layer system, is arranged between illumination objective and separating layer system and/or between detection objective and separating layer system.Type: ApplicationFiled: November 13, 2014Publication date: October 6, 2016Applicant: Carl Zeiss Microscopy GMBHInventors: Wolfgang SINGER, David SHAFER, Artur DEGEN, Jörg SIEBENMORGEN
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Publication number: 20160291303Abstract: An optical transmission system configured to image a selected region of a sample arranged in a first medium in an object plane on or in a sample carrier, which includes plane-parallel plate, from the object plane into an intermediate image plane in a second medium. The plane-parallel plate is located between the optical transmission system and the sample during the imaging. The object plane and the intermediate image plane form an angle between 0° and 90° with an optical axis of the transmission system. The optical transmission system is positioned relative to region of the sample such that the sample is located within the focal length of the lens of the optical transmission system closest to the sample. The intermediate image plane and the object plane are located on the same side of the optical transmission system, and the intermediate image is a virtual image.Type: ApplicationFiled: November 13, 2014Publication date: October 6, 2016Applicant: Carl Zeiss Microscopy GmbHInventors: Artur DEGEN, Michael Gölles, Jörg SIEBENMORGEN, Helmut Lippert, Thomas Kalkbrenner, Ingo Kleppe, Matthias Wald, Lars-Christian Wittig, Wolfgang SINGER, Ralf WOLLESCHENSKY
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Publication number: 20160170195Abstract: An arrangement for light sheet microscopy including: a sample vessel, for receiving a medium containing sample, having a covering and being oriented with respect to a planar reference surface; illumination optics with an illumination objective for illuminating the sample with a light sheet; and detection optics with a detection objective. The optical axis of the illumination objective and the light sheet lies in a plane that forms a nonzero illumination angle with the normal of the reference surface. The optical axis of the detection objective forms a nonzero detection angle with the normal of the reference surface. A bulge is formed at the covering for receiving the sample. The bulge has inner and outer interfaces. The optical axes of the illumination objective and detection objective form a minimal angle with the normals of the interfaces at least in the region where the optical axes pass through the interfaces.Type: ApplicationFiled: July 8, 2014Publication date: June 16, 2016Applicant: Carl Zeiss Microscopy GmbHInventors: Jörg SIEBENMORGEN, Thomas KALKBRENNER, Helmut LIPPERT
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Publication number: 20160154236Abstract: An arrangement, for light sheet microscopy, including: a sample vessel, for receiving a medium containing a sample, oriented with respect to a plane reference surface; illumination optics with an illumination objective for illuminating the sample with a light sheet; and detection optics with a detection objective. The optical axis of the illumination objective and the light sheet lies in a plane which forms a nonzero illumination angle with the normal of the reference surface. The detection objective has an optical axis that forms a nonzero detection angle with the normal of the reference surface. The arrangement also includes a separating-layer system for separating the sample-containing medium from the illumination and detection objectives. The separating-layer system contacts the medium with an interface parallel to the reference surface. The illumination angle and detection angle are predetermined based on numerical apertures of the detection objective and of the illumination objective, respectively.Type: ApplicationFiled: July 8, 2014Publication date: June 2, 2016Applicant: Carl Zeiss Microscopy GmbHInventors: Jörg Siebenmorgen, Thomas Kalkbrenner, Helmut Lippert
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Publication number: 20150168732Abstract: A microscope, in particular according to any of the preceding claims, consisting of an illuminating device, comprising an illumination light source and an illumination beam path for illuminating the specimen with a light sheet, a detection device for detecting light emitted by the specimen, and an imaging optical unit, which images the specimen via an imaging objective in an imaging beam path at least partly onto the detection device, wherein the light sheet is essentially planar at the focus of the imaging objective or in a defined plane in proximity of the geometrical focus of the imaging objective, and wherein the imaging objective has an optical axis, which intersects the plane of the light sheet at an angle that is different from zero, preferably perpendicularly, wherein an amplitude and/or phase filter is provided in the illumination beam path, said filter acting as a sine spatial filter in that it limits the illumination light in at least one spatial direction by filtering the spatial frequencies thatType: ApplicationFiled: June 26, 2013Publication date: June 18, 2015Inventors: Wolfgang Singer, Jorg Siebenmorgen, Tiemo Anhut, Ralf Wolleschensky
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Publication number: 20140340483Abstract: A three-dimensional high-resolution localization microscopy method including illuminating a sample by excitation radiation to excite fluorescence markers in the sample to luminesce, and imaging the sample in an image frame via imaging optics along an imaging direction, wherein the image frame contains images of the luminescing fluorescence markers, and the imaging optics have a plane of focus and an optical resolution. The excitation step and imaging steps are repeated multiple times to generate a plurality of image frames, wherein the excitation steps are performed to isolate the images of the luminescing fluorescence markers in each image frame for at least some of the luminescing fluorescence markers. The location of the corresponding fluorescence marker is determined in each instance in the generated plurality of image frames from the isolated images of the luminescing fluorescence markers, and a highly resolved total image is generated from the locations determined in this way.Type: ApplicationFiled: May 13, 2014Publication date: November 20, 2014Applicant: Carl Zeiss Microscopy GmbHInventors: Jörg RITTER, Jörg Siebenmorgen, Thomas Kalkbrenner