Patents by Inventor Juan Santiago

Juan Santiago has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20250250616
    Abstract: Provided are methods of analyzing target nucleic acids, the methods comprising, using the target nucleic acids as reagents and reporters as substrates, assaying enzyme kinetic parameters of Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) endonucleases comprising guide RNAs (gRNAs) that hybridize with reference nucleic acids. In certain aspects, certain such methods comprise comparing a sequence of a target nucleic acid with a sequence of a reference nucleic acid. In some embodiments, such comparison is based on the rates of cleavage of the reporters at plurality of concentrations of the reporters. The kinetic parameters can also be the Michaelis-Menten constant (KM), the apparent turnover rate (K*cat), and/or the apparent catalytic efficiency (K*cat/KM). Kits for performing the methods of the disclosure are also provided.
    Type: Application
    Filed: April 12, 2023
    Publication date: August 7, 2025
    Applicant: The Board of Trustees of the Leland Stanford Junior University
    Inventors: Juan Santiago, Alexandre Avaro, Ashwin Ramachandran, Diego Huyke, Charles Blanluet
  • Publication number: 20250224280
    Abstract: A thermometer configured to detect a range of temperatures of a cooking surface includes a gauge including a first indicia and a second indicia, a thermometal operably connected to the gauge, and a stationary member defining a first aperture, the gauge configured to rotate relative to the stationary member. In response to the thermometal detecting a first range of temperatures, the gauge is configured to rotate relative to the stationary member to display the first indicia through the first aperture. In response to the thermometal detecting a second range of temperatures, the gauge is configured to rotate relative to the stationary member to display the second indicia through the first aperture.
    Type: Application
    Filed: January 4, 2024
    Publication date: July 10, 2025
    Inventors: Jeremy Michael Miller, Jose Juan Santiago, Craig Stevenson, Terri Zeman, Michael John Brucki, Morad Ghassemian, Ray Hubert, Paola Galindo, Phill Smart, Paulo Moledo, Belinda Long
  • Patent number: 12033727
    Abstract: The present disclosure is directed to managing and accessing experiment data. A data processing system may generate a system identifier for each instance that leads to a generation of experiment data. A first segment may refer to a source entity, and may be used to differentiate identifiers generated by different source entities. This implementation may aim to provide an explicit representation of the data generation process while providing a glimpse on select metadata attributes, such as an individual species, sample class, and experimental technique used to generate the dataset. These constraints may prevent duplicates and may enable system-side associations among subjects, samples, aliquots, and experiments.
    Type: Grant
    Filed: July 23, 2020
    Date of Patent: July 9, 2024
    Assignee: Memorial Sloan Kettering Cancer Center
    Inventors: Juan Santiago Medina-Martinez, Elli Pappaemmanuil, Andrew Kung, Juan Esteban Arango Ossa, Max Fine Levine
  • Publication number: 20230121103
    Abstract: Described embodiments provide systems and methods for performing cancer whole genome and transcriptome sequencing (cWGTS). A plurality of datasets can be generated based on sequencing of a tumor sample and a healthy control germline sample. A plurality of databases, comprising a first, second and third database, can be accessed. An RNA gene expression analysis can be performed to generate a first plurality of outputs. A DNA ploidy and allelic imbalance analysis can be performed to generate a second plurality of outputs. A variant calling analysis can be performed to generate a third plurality of outputs. A workflow may be implemented. Cohort classification scores and disease-specific classification scores for each individual level output in each of the first, second, and third pluralities of outputs can be generated. A report can be generated and provided to one or more users.
    Type: Application
    Filed: July 5, 2022
    Publication date: April 20, 2023
    Inventors: Max Levine, Gunes Gundem, Yangyu Zhou, Juan Esteban Arango Ossa, Juan Santiago Medina-Martinez, Jesus Gutierrez-Abril, Elli Papaemmanuil, Andrew Kung, Neerav Shukla
  • Publication number: 20220246245
    Abstract: The present disclosure is directed to managing and accessing experiment data. A data processing system may generate a system identifier for each instance that leads to a generation of experiment data. A first segment may refer to a source entity, and may be used to differentiate identifiers generated by different source entities. This implementation may aim to provide an explicit representation of the data generation process while providing a glimpse on select metadata attributes, such as an individual species, sample class, and experimental technique used to generate the dataset. These constraints may prevent duplicates and may enable system-side associations among subjects, samples, aliquots, and experiments.
    Type: Application
    Filed: July 23, 2020
    Publication date: August 4, 2022
    Inventors: Juan Santiago MEDINA-MARTINEZ, Elli PAPPAEMMANUIL, Andrew KUNG, Juan Esteban Arango OSSA, Max Fine LEVINE
  • Patent number: 10416082
    Abstract: Provided are methods, devices and systems that utilize free-surface fluidics and SERS for analyte detection with high sensitivity and specificity. The molecules can be airborne agents, including but not limited to explosives, narcotics, hazardous chemicals, or other chemical species. The free-surface fluidic architecture is created using an open microchannel, and exhibits a large surface to volume ratio. The free-surface fluidic interface can filter interferent molecules, while concentrating airborne analyte molecules. The microchannel flow enables controlled aggregation of SERS-active probe particles in the flow, thereby enhancing the detector's sensitivity.
    Type: Grant
    Filed: July 31, 2017
    Date of Patent: September 17, 2019
    Assignees: The Regents of the University of California, Board of Trustees of the Leland Stanford Junior University
    Inventors: Carl D. Meinhart, Brian Piorek, Seung Joon Lee, Martin Moskovits, Sanjoy Banerjee, Juan Santiago
  • Patent number: 10408827
    Abstract: A combination of surface plasmon field enhanced fluorescence spectroscopy (SPFS) and isotachophoresis (ITP) technologies for detecting biomolecules is disclosed. It uses ITP to preconcentrate the reactants and accelerate the reaction, and then delivers the reacted sample to an SPFS sensor for detection. A microfluidic device with a T-junction is provided, which has two reservoirs respectively containing a low-mobility trailing electrolyte buffer and a high-mobility leading electrolyte buffer, and a main fluid channel between the two reservoirs, where the SPFS sensor is located on a side channel joined to the main channel. A two-step technique is employed, including a step of sample loading and ITP extraction, and a step of delivery of concentrated sample to the detector chamber by pressure-driven flow. In another embodiment, the SPFS sensor is located on the main fluid channel between the two reservoirs. In a particular example, the technique is used in a DNAzyme assay.
    Type: Grant
    Filed: November 21, 2017
    Date of Patent: September 10, 2019
    Assignees: KONICA MINOLTA LABORATORY U.S.A., INC., THE BOARD OF TRUSTEES OF THE LELAND STANFORD JUNIOR UNIVERSITY
    Inventors: Noriaki Yamamoto, Juan Santiago, Denitsa Milanova
  • Patent number: 9939435
    Abstract: A combination of surface plasmon field enhanced fluorescence spectroscopy (SPFS) and isotachophoresis (ITP) technologies for detecting biomolecules is disclosed. It uses ITP to preconcentrate the reactants and accelerate the reaction, and then delivers the reacted sample to an SPFS sensor for detection. A microfluidic device with a T-junction is provided, which has two reservoirs respectively containing a low-mobility trailing electrolyte buffer and a high-mobility leading electrolyte buffer, and a main fluid channel between the two reservoirs, where the SPFS sensor is located on a side channel joined to the main channel. A two-step technique is employed, including a step of sample loading and ITP extraction, and a step of delivery of concentrated sample to the detector chamber by pressure-driven flow. In another embodiment, the SPFS sensor is located on the main fluid channel between the two reservoirs. In a particular example, the technique is used in a DNAzyme assay.
    Type: Grant
    Filed: March 16, 2016
    Date of Patent: April 10, 2018
    Assignees: KONICA MINOLTA LABORATORY U.S.A., INC., THE BOARD OF TRUSTEES OF THE LELAND STANFORD JUNIOR UNIVERSITY
    Inventors: Noriaki Yamamoto, Juan Santiago, Denitsa Milanova
  • Publication number: 20180095080
    Abstract: A combination of surface plasmon field enhanced fluorescence spectroscopy (SPFS) and isotachophoresis (ITP) technologies for detecting biomolecules is disclosed. It uses ITP to preconcentrate the reactants and accelerate the reaction, and then delivers the reacted sample to an SPFS sensor for detection. A microfluidic device with a T-junction is provided, which has two reservoirs respectively containing a low-mobility trailing electrolyte buffer and a high-mobility leading electrolyte buffer, and a main fluid channel between the two reservoirs, where the SPFS sensor is located on a side channel joined to the main channel. A two-step technique is employed, including a step of sample loading and ITP extraction, and a step of delivery of concentrated sample to the detector chamber by pressure-driven flow. In another embodiment, the SPFS sensor is located on the main fluid channel between the two reservoirs. In a particular example, the technique is used in a DNAzyme assay.
    Type: Application
    Filed: November 21, 2017
    Publication date: April 5, 2018
    Applicants: Konica Minolta Laboratory U.S.A., Inc., The Board of Trustees of the Leland Stanford Junior University
    Inventors: Noriaki Yamamoto, Juan Santiago, Denitsa Milanova
  • Publication number: 20180024067
    Abstract: Provided are methods, devices and systems that utilize free-surface fluidics and SERS for analyte detection with high sensitivity and specificity. The molecules can be airborne agents, including but not limited to explosives, narcotics, hazardous chemicals, or other chemical species. The free-surface fluidic architecture is created using an open microchannel, and exhibits a large surface to volume ratio. The free-surface fluidic interface can filter interferent molecules, while concentrating airborne analyte molecules. The microchannel flow enables controlled aggregation of SERS-active probe particles in the flow, thereby enhancing the detector's sensitivity.
    Type: Application
    Filed: July 31, 2017
    Publication date: January 25, 2018
    Inventors: Carl D. Meinhart, Brian Piorek, Seung Joon Lee, Martin Moskovits, Sanjoy Banerjee, Juan Santiago
  • Patent number: 9719930
    Abstract: Provided are methods, devices and systems that utilize free-surface fluidics and SERS for analyte detection with high sensitivity and specificity. The molecules can be airborne agents, including but not limited to explosives, narcotics, hazardous chemicals, or other chemical species. The free-surface fluidic architecture is created using an open microchannel, and exhibits a large surface to volume ratio. The free-surface fluidic interface can filter interferent molecules, while concentrating airborne analyte molecules. The microchannel flow enables controlled aggregation of SERS-active probe particles in the flow, thereby enhancing the detector's sensitivity.
    Type: Grant
    Filed: July 31, 2015
    Date of Patent: August 1, 2017
    Assignees: The Regents of the University of California, Board of Trustees of the Leland Stanford Junior University
    Inventors: Carl D. Meinhart, Brian Piorek, Seung Joon Lee, Martin Moskovits, Sanjoy Banerjee, Juan Santiago
  • Publication number: 20160209407
    Abstract: A combination of surface plasmon field enhanced fluorescence spectroscopy (SPFS) and isotachophoresis (ITP) technologies for detecting biomolecules is disclosed. It uses ITP to preconcentrate the reactants and accelerate the reaction, and then delivers the reacted sample to an SPFS sensor for detection. A microfluidic device with a T-junction is provided, which has two reservoirs respectively containing a low-mobility trailing electrolyte buffer and a high-mobility leading electrolyte buffer, and a main fluid channel between the two reservoirs, where the SPFS sensor is located on a side channel joined to the main channel. A two-step technique is employed, including a step of sample loading and ITP extraction, and a step of delivery of concentrated sample to the detector chamber by pressure-driven flow. In another embodiment, the SPFS sensor is located on the main fluid channel between the two reservoirs. In a particular example, the technique is used in a DNAzyme assay.
    Type: Application
    Filed: March 16, 2016
    Publication date: July 21, 2016
    Applicants: KONICA MINOLTA LABORATORY U.S.A., INC., The Board of Trustees of the Leland Stanford Junior University
    Inventors: Noriaki Yamamoto, Juan Santiago, Denitsa Milanova
  • Publication number: 20160033415
    Abstract: Provided are methods, devices and systems that utilize free-surface fluidics and SERS for analyte detection with high sensitivity and specificity. The molecules can be airborne agents, including but not limited to explosives, narcotics, hazardous chemicals, or other chemical species. The free-surface fluidic architecture is created using an open microchannel, and exhibits a large surface to volume ratio. The free-surface fluidic interface can filter interferent molecules, while concentrating airborne analyte molecules. The microchannel flow enables controlled aggregation of SERS-active probe particles in the flow, thereby enhancing the detector's sensitivity.
    Type: Application
    Filed: July 31, 2015
    Publication date: February 4, 2016
    Inventors: Carl D. Meinhart, Brian Piorek, Seung Joon Lee, Martin Moskovits, Sanjoy Banerjee, Juan Santiago
  • Patent number: 9097676
    Abstract: Provided are methods, devices and systems that utilize free-surface fluidics and SERS for analyte detection with high sensitivity and specificity. The molecules can be airborne agents, including but not limited to explosives, narcotics, hazardous chemicals, or other chemical species. The free-surface fluidic architecture is created using an open microchannel, and exhibits a large surface to volume ratio. The free-surface fluidic interface can filter interferent molecules, while concentrating airborne analyte molecules. The microchannel flow enables controlled aggregation of SERS-active probe particles in the flow, thereby enhancing the detector's sensitivity.
    Type: Grant
    Filed: April 29, 2013
    Date of Patent: August 4, 2015
    Assignees: The Regents of the University of California, Board of Trustees of the Leland Stanford Junior University
    Inventors: Carl D. Meinhart, Brian Piorek, Seung Joon Lee, Martin Moskovits, Sanjoy Banerjee, Juan Santiago
  • Patent number: 8999129
    Abstract: The present invention provides a mechanism for separating or isolating charged particles under the influence of an electric field without metal electrodes being in direct contact with the sample solution. The metal electrodes normally in contact with the sample are replaced with high conductivity fluid electrodes situated parallel and adjacent to the sample. When the fluid electrodes transmit the electric field across the sample, particles within the sample migrate according to their electrophoretic mobility.
    Type: Grant
    Filed: March 6, 2012
    Date of Patent: April 7, 2015
    Assignees: Lawrence Livermore National Security, LLC, The Board of Trustees of the Leland Stanford Junior University
    Inventors: Byoungsok Jung, Klint A. Rose, Maxim Shusteff, Alexandre Persat, Juan Santiago
  • Patent number: 8618694
    Abstract: System, method, and computer program product for dampening oscillations of the electrical power on a power grid. The system includes a wind park with multiple wind turbines. Each wind turbine includes a rotor, a generator operatively coupled with the rotor for generating electrical power, and an inverter coupling the generator with the power grid to output the electrical power to the power grid. A controller is configured to generate a first control signal to cause the inverter of the first wind turbine to modulate the electrical power output by the first wind turbine for dampening oscillations of one frequency in electrical power on the power grid and to generate a second control signal to cause the inverter of the second wind turbine to modulate the electrical power output by the second wind turbine for dampening oscillations of a different frequency in the electrical power on the power grid.
    Type: Grant
    Filed: June 30, 2010
    Date of Patent: December 31, 2013
    Assignee: Vestas Wind Systems A/S
    Inventors: Juan Santiago Santos, Brett D. Rollow, Jason Hoffman
  • Publication number: 20130121884
    Abstract: Provided are methods, devices and systems that utilize free-surface fluidics and SERS for analyte detection with high sensitivity and specificity. The molecules can be airborne agents, including but not limited to explosives, narcotics, hazardous chemicals, or other chemical species. The free-surface fluidic architecture is created using an open microchannel, and exhibits a large surface to volume ratio. The free-surface fluidic interface can filter interferent molecules, while concentrating airborne analyte molecules. The microchannel flow enables controlled aggregation of SERS-active probe particles in the flow, thereby enhancing the detector's sensitivity.
    Type: Application
    Filed: August 1, 2012
    Publication date: May 16, 2013
    Applicant: THE REGENTS OF THE UNIVERSITY OF CALIFORNIA
    Inventors: Carl Meinhart, Brian Piorek, Seung Joon Lee, Martin Moskovits, Sanjoy Banerjee, Juan Santiago
  • Patent number: 8431409
    Abstract: Provided are methods, devices and systems that utilize free-surface fluidics and SERS for analyte detection with high sensitivity and specificity. The molecules can be airborne agents, including but not limited to explosives, narcotics, hazardous chemicals, or other chemical species. The free-surface fluidic architecture is created using an open microchannel, and exhibits a large surface to volume ratio. The free-surface fluidic interface can filter interferent molecules, while concentrating airborne analyte molecules. The microchannel flow enables controlled aggregation of SERS-active probe particles in the flow, thereby enhancing the detector's sensitivity.
    Type: Grant
    Filed: August 1, 2012
    Date of Patent: April 30, 2013
    Assignees: The Regents of the University of California, The Board of Trustees of the Leland Stanford Junior University
    Inventors: Carl D. Meinhart, Brian Piorek, Seung Joon Lee, Martin Moskovits, Sanjoy Banerjee, Juan Santiago
  • Patent number: D1070481
    Type: Grant
    Filed: January 13, 2023
    Date of Patent: April 15, 2025
    Assignee: Hy Cite Enterprises, LLC
    Inventors: Aric Dichraff, Jose Juan Santiago, Craig Stevenson, Terri Zeman, Morad Ghassemian, Jose Shi Chun Yu
  • Patent number: D1082404
    Type: Grant
    Filed: January 17, 2023
    Date of Patent: July 8, 2025
    Assignee: Hy Cite Enterprises, LLC
    Inventors: Jeremy Michael Miller, Jose Juan Santiago, Craig Stevenson, Terri Zeman, Michael John Brucki, Morad Ghassemian, Alexandre De Oliveira Campos, Chor Leung Ko, Paola Galindo, Chi Wai Chan