Patents by Inventor Mark J. Cooper
Mark J. Cooper has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).
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Publication number: 20200316225Abstract: Targeted non-surgical administration of a nucleic acid formulation to the suprachoroidal space (SCS) of the eye of a human subject permits effective treatment of ocular disorders, including posterior ocular or choroidal maladies. In one embodiment, the method comprises inserting a hollow microneedle into the eye at an insertion site and infusing a nucleic acid formulation through the inserted microneedle and into the suprachoroidal space of the eye. The infused nucleic acid formulation flows within the suprachoroidal space away from the insertion site. In one embodiment, the fluid nucleic acid formulation comprises nucleic acid nanoparticles consisting of one molecule of nucleic acid.Type: ApplicationFiled: November 28, 2018Publication date: October 8, 2020Inventors: Donna Taraborelli, Jesse Yoo, Glenn Noronha, Mark J. Cooper, Robert C. Moen, Daniel White, Rick McElheny
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Patent number: 8389238Abstract: Efficient and prolonged hCFTR expression is one of the major obstacles for cystic fibrosis lung therapy. hCFTR mRNA expression levels depend on eukaryotic expression cassette components, prokaryotic backbone elements, and the gene transfer method may also influence transcriptional silencing mechanisms. A codon-optimized and CpG-reduced human CFTR gene (CO-CFTR) was made. Various vector modifications were tested to facilitate extended duration of CO-CFTR expression. Insertion of an extended 3?BGH transcribed sequence (712 bp) in an inverted orientation produced prolonged expression of CO-CFTR expression at biologically relevant levels. Further studies revealed that prolonged CO-CFTR expression is dependant on the orientation of the extended BGH 3? BGH transcribed sequence and its transcription, is not specific to the UbC promoter, and is less dependent on other vector backbone elements.Type: GrantFiled: September 12, 2008Date of Patent: March 5, 2013Assignee: Copernicus Therapeutics, Inc.Inventors: Mark J. Cooper, Linas Padegimas
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Patent number: 8017577Abstract: Counterions of polycations used to compact nucleic acids profoundly affect shape and stability of particles formed. Shape is associated with differential serum nuclease resistance and colloidal stability. A surrogate for determining such properties that is easy to measure is the turbidity parameter. Shape also affects the suitability and efficacy of compacted nucleic acid complexes for transfecting cells by various routes into a mammalian body. Moreover, counterions such as acetate can protect compacted nucleic acid complexes from adverse effects of lyophilization.Type: GrantFiled: September 8, 2003Date of Patent: September 13, 2011Assignee: Copernicus Therapeutics, Inc.Inventors: Mark J. Cooper, Murali K. Pasumarthy, Tomasz H. Kowalczyk, Maureen Costello
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Publication number: 20110035819Abstract: A synthetic hCFTR DNA sequence has been developed that produces remarkably high levels of hCFTR mRNA and protein in dosed murine lungs and human cells in culture compared to the natural hCFTR cDNA. This synthetic DNA addresses problems inherent in some natural cDNAs, such as premature transcriptional truncation sites introduced during cDNA synthesis. Introns are initially present in mRNA until the mRNA is processed. cDNA made from processed mRNA is devoid of introns. Thus DNA sequences (exon junctions) are present in a cDNA molecule which are not present in cells in nature. These exon junctions may affect transcription. Methods for improving expression of CFTR are based on sequence changes in cDNA molecules. The improvement methods may be applied to other cDNA molecules which are refractory to in vivo expression efforts. Compositions embodying the sequence changes increase the production of both transgenic mRNA and protein from cDNA molecules.Type: ApplicationFiled: October 12, 2007Publication date: February 10, 2011Applicant: COPERNICUS THERAPEUTICS INC.Inventors: Mark J. Cooper, Linas Padegimas
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Publication number: 20100203627Abstract: Efficient and prolonged hCFTR expression is one of the major obstacles for cystic fibrosis lung therapy. hCFTR mRNA expression levels depend on eukaryotic expression cassette components, prokaryotic backbone elements, and the gene transfer method may also influence transcriptional silencing mechanisms. A codon-optimized and CpG-reduced human CFTR gene (CO-CFTR) was made. Various vector modifications were tested to facilitate extended duration of CO-CFTR expression. Insertion of an extended 3?BGH transcribed sequence (712 bp) in an inverted orientation produced prolonged expression of CO-CFTR expression at biologically relevant levels. Further studies revealed that prolonged CO-CFTR expression is dependant on the orientation of the extended BGH 3? BGH transcribed sequence and its transcription, is not specific to the UbC promoter, and is less dependent on other vector backbone elements.Type: ApplicationFiled: September 12, 2008Publication date: August 12, 2010Applicant: COPERNICUS THERAPEUTICS, INC.Inventors: Mark J. Cooper, Linas Padegimas
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Publication number: 20090011040Abstract: The present invention is a method of using compacted nucleic acid (such as DNA) nanoparticles for non-viral gene transfer to various tissues of the human eye or eyes of other mammals. These nanoparticles comprise, in one embodiment, a neutrally-charged complex containing a single molecule of plasmid DNA compacted with polyethylene glycol (PEG)-substituted poly lysine peptides.Type: ApplicationFiled: May 2, 2008Publication date: January 8, 2009Inventors: Muna I. Naash, Mark J. Cooper
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Publication number: 20040048787Abstract: Counterions of polycations used to compact nucleic acids profoundly affect shape and stability of particles formed. Shape is associated with differential serum nuclease resistance and colloidal stability. A surrogate for determining such properties that is easy to measure is the turbidity parameter. Shape also affects the suitability and efficacy of compacted nucleic acid complexes for transfecting cells by various routes into a mammalian body.Type: ApplicationFiled: September 8, 2003Publication date: March 11, 2004Applicant: Copernicus Therapeutics, Inc.Inventors: Mark J. Cooper, Murali K. Pasumarthy, Tomasz H. Kowalczyk, Maureen Costello
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Publication number: 20030171322Abstract: Counterions of polycations used to compact nucleic acids profoundly affect shape and stability of particles formed. Shape is associated with differential serum nuclease resistance and colloidal stability. A surrogate for determining such properties that is easy to measure is the turbidity parameter. Shape also affects the suitability and efficacy of compacted nucleic acid complexes for transfecting cells by various routes into a mammalian body.Type: ApplicationFiled: December 2, 2002Publication date: September 11, 2003Applicant: Copernicus Therapeutics, Inc.Inventors: Mark J. Cooper, Murali K. Pasumarthy, Tomasz H. Kowalczyk, Maureen Costello
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Publication number: 20030134818Abstract: Counterions of polycations used to compact nucleic acids profoundly affect shape and stability of particles formed. Shape is associated with differential serum nuclease resistance and colloidal stability. A surrogate for determining such properties that is easy to measure is the turbidity parameter. Shape also affects the suitability and efficacy of compacted nucleic acid complexes for transfecting cells by various routes into a mammalian body.Type: ApplicationFiled: December 2, 2002Publication date: July 17, 2003Applicant: Copernicus Therapeutics, Inc.Inventors: Mark J. Cooper, Murali K. Pasumarthy, Tomasz H. Kowalczyk, Maureen Costello
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Publication number: 20030078229Abstract: Counterions of polycations used to compact nucleic acids profoundly affect shape and stability of particles formed. Shape is associated with differential serum nuclease resistance and colloidal stability. A surrogate for determining such properties that is easy to measure is the turbidity parameter. Shape also affects the suitability and efficacy of compacted nucleic acid complexes for transfecting cells by various routes into a mammalian body.Type: ApplicationFiled: November 27, 2002Publication date: April 24, 2003Applicant: Copernicus Therapeutics, Inc.Inventors: Mark J. Cooper, Murali K. Pasumarthy, Tomasz H. Kowalczyk, Maureen Costello
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Publication number: 20030078230Abstract: Counterions of polycations used to compact nucleic acids profoundly affect shape and stability of particles formed. Shape is associated with differential serum nuclease resistance and colloidal stability. A surrogate for determining such properties that is easy to measure is the turbidity parameter. Shape also affects the suitability and efficacy of compacted nucleic acid complexes for transfecting cells by various routes into a mammalian body.Type: ApplicationFiled: November 27, 2002Publication date: April 24, 2003Applicant: Copernicus Therapeutics, Inc.Inventors: Mark J. Cooper, Murali K. Pasumarthy, Tomasz H. Kowalczyk, Maureen Costello
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Patent number: 6506890Abstract: An automated nucleic acid compaction device for analyzing and compacting a nucleic acid complex into unimolecular nucleic acid particles. Broadly, the device includes a container support and agitation system; a measuring and testing system; and a dispensing system; all controlled by a control system. The control system controls the support and agitation system and the dispensing system based either on a predetermined formulation or by analysis of feedback data provided by the measuring and testing system. In a preferred embodiment, the device is a real-time measuring and mixing instrument operating in a closed loop system. The preferred embodiment also comprises a monitoring system including a submersible probe which is positioned in the batch solution to provide data to a controller. Once a desired level of nucleic acid compaction is reached, as detected by the monitoring system, the controller stops the dispensing and mixing agitating systems.Type: GrantFiled: November 28, 2000Date of Patent: January 14, 2003Inventors: Mark J. Cooper, Tomasz H. Kowalczyk, Murali Krishna Pasumarthy
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Publication number: 20020160516Abstract: A method is described for expressing biologically functional proteins without host cell toxicity. This method takes advantage of the surprising replication activating ability of the 107/402-T antigen. The invention also provides expression vectors, human cells, and fusion proteins for practicing the method.Type: ApplicationFiled: January 14, 2002Publication date: October 31, 2002Inventor: Mark J. Cooper
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Patent number: 6454369Abstract: A pull-out keyboard tray. The pull-out keyboard tray includes an adjustable keyboard platform, removable storage compartments, and keyboard wiring protrusions. The keyboard is slightly mounted on drawer slides having multiple position detents, and is adapted for mounting under a desk top surface and the like. The keyboard further includes a removable palmrest, as well as slide shrouds for shrouding the drawer slides.Type: GrantFiled: May 4, 1999Date of Patent: September 24, 2002Assignee: Accuride International, Inc.Inventors: Mark J. Cooper, Kristin M. Stewart
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Publication number: 20020043604Abstract: A pull-out keyboard tray. The pull-out keyboard tray includes an adjustable keyboard platform, removable storage compartments, and keyboard wiring protrusions. The keyboard is slightly mounted on drawer slides having multiple position detents, and is adapted for mounting under a desk top surface and the like. The keyboard further includes a removable palmrest, as well as slide shrouds for shrouding the drawer slides.Type: ApplicationFiled: May 4, 1999Publication date: April 18, 2002Inventors: MARK J. COOPER, KRISTIN M. STEWART
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Publication number: 20020042388Abstract: Counterions of polycations used to compact nucleic acids profoundly affect shape and stability of particles formed. Shape is associated with differential serum nuclease resistance and colloidal stability. A surrogate for determining such properties that is easy to measure is the turbidity parameter. Shape also affects the suitability and efficacy of compacted nucleic acid complexes for transfecting cells by various routes into a mammalian body.Type: ApplicationFiled: May 31, 2001Publication date: April 11, 2002Inventors: Mark J. Cooper, Murali K. Pasumarthy, Tomasz H. Kowalczyk, Maureen Costello
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Publication number: 20020031803Abstract: Novel methods are described for expression of biologically functional therapeutic and other proteins without host cell toxicity. The methods take advantage of the surprising replication activating ability of the 107/402-T antigen. The invention also provides fusion proteins, expression vectors, and mammalian cells, for practicing the methods.Type: ApplicationFiled: August 24, 2001Publication date: March 14, 2002Inventor: Mark J. Cooper
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Patent number: 6339065Abstract: Episomal plasmids containing a papovavirus origin of replication and a papovavirus large T antigen mutant form are shown to replicate episomally in human cells, and yield levels of gene expression proportional to their episomal copy number. In conjunction with liposomal or receptor-mediated delivery systems, papovavirus-derived episomal plasmids provide an alternative vector for gene therapy, particularly when utilizing strategies requiring high levels of gene expression.Type: GrantFiled: January 30, 1996Date of Patent: January 15, 2002Assignee: Case Western Reserve UniversityInventor: Mark J. Cooper
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Patent number: 6281005Abstract: An automated nucleic acid compaction device for analyzing and compacting a nucleic acid complex into unimolecular nucleic acid particles. Broadly, the device includes a container support and agitation system; a measuring and testing system; and a dispensing system; all controlled by a control system. The control system controls the support and agitation system and the dispensing system based either on a predetermined formulation or by analysis of feedback data provided by the measuring and testing system. In a preferred embodiment, the device is a real-time measuring and mixing instrument operating in a closed loop system. The preferred embodiment also comprises a monitoring system including a submersible probe which is positioned in the batch solution to provide data to a controller. Once a desired level of nucleic acid compaction is reached, as detected by the monitoring system, the controller stops the dispensing and mixing agitating systems.Type: GrantFiled: May 14, 1999Date of Patent: August 28, 2001Assignee: Copernicus Therapeutics, Inc.Inventors: Hector L. Casal, Mark J. Cooper, Tomasz H. Kowalczyk, Murali Krishna Pasumarthy, Jose C. Perales, Steven J. Torontali
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Patent number: D447145Type: GrantFiled: September 15, 2000Date of Patent: August 28, 2001Assignee: Accuride International Inc.Inventors: Mark J. Cooper, Kristin M. Stewart