Patents by Inventor Mark J. Cooper

Mark J. Cooper has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20200316225
    Abstract: Targeted non-surgical administration of a nucleic acid formulation to the suprachoroidal space (SCS) of the eye of a human subject permits effective treatment of ocular disorders, including posterior ocular or choroidal maladies. In one embodiment, the method comprises inserting a hollow microneedle into the eye at an insertion site and infusing a nucleic acid formulation through the inserted microneedle and into the suprachoroidal space of the eye. The infused nucleic acid formulation flows within the suprachoroidal space away from the insertion site. In one embodiment, the fluid nucleic acid formulation comprises nucleic acid nanoparticles consisting of one molecule of nucleic acid.
    Type: Application
    Filed: November 28, 2018
    Publication date: October 8, 2020
    Inventors: Donna Taraborelli, Jesse Yoo, Glenn Noronha, Mark J. Cooper, Robert C. Moen, Daniel White, Rick McElheny
  • Patent number: 8389238
    Abstract: Efficient and prolonged hCFTR expression is one of the major obstacles for cystic fibrosis lung therapy. hCFTR mRNA expression levels depend on eukaryotic expression cassette components, prokaryotic backbone elements, and the gene transfer method may also influence transcriptional silencing mechanisms. A codon-optimized and CpG-reduced human CFTR gene (CO-CFTR) was made. Various vector modifications were tested to facilitate extended duration of CO-CFTR expression. Insertion of an extended 3?BGH transcribed sequence (712 bp) in an inverted orientation produced prolonged expression of CO-CFTR expression at biologically relevant levels. Further studies revealed that prolonged CO-CFTR expression is dependant on the orientation of the extended BGH 3? BGH transcribed sequence and its transcription, is not specific to the UbC promoter, and is less dependent on other vector backbone elements.
    Type: Grant
    Filed: September 12, 2008
    Date of Patent: March 5, 2013
    Assignee: Copernicus Therapeutics, Inc.
    Inventors: Mark J. Cooper, Linas Padegimas
  • Patent number: 8017577
    Abstract: Counterions of polycations used to compact nucleic acids profoundly affect shape and stability of particles formed. Shape is associated with differential serum nuclease resistance and colloidal stability. A surrogate for determining such properties that is easy to measure is the turbidity parameter. Shape also affects the suitability and efficacy of compacted nucleic acid complexes for transfecting cells by various routes into a mammalian body. Moreover, counterions such as acetate can protect compacted nucleic acid complexes from adverse effects of lyophilization.
    Type: Grant
    Filed: September 8, 2003
    Date of Patent: September 13, 2011
    Assignee: Copernicus Therapeutics, Inc.
    Inventors: Mark J. Cooper, Murali K. Pasumarthy, Tomasz H. Kowalczyk, Maureen Costello
  • Publication number: 20110035819
    Abstract: A synthetic hCFTR DNA sequence has been developed that produces remarkably high levels of hCFTR mRNA and protein in dosed murine lungs and human cells in culture compared to the natural hCFTR cDNA. This synthetic DNA addresses problems inherent in some natural cDNAs, such as premature transcriptional truncation sites introduced during cDNA synthesis. Introns are initially present in mRNA until the mRNA is processed. cDNA made from processed mRNA is devoid of introns. Thus DNA sequences (exon junctions) are present in a cDNA molecule which are not present in cells in nature. These exon junctions may affect transcription. Methods for improving expression of CFTR are based on sequence changes in cDNA molecules. The improvement methods may be applied to other cDNA molecules which are refractory to in vivo expression efforts. Compositions embodying the sequence changes increase the production of both transgenic mRNA and protein from cDNA molecules.
    Type: Application
    Filed: October 12, 2007
    Publication date: February 10, 2011
    Applicant: COPERNICUS THERAPEUTICS INC.
    Inventors: Mark J. Cooper, Linas Padegimas
  • Publication number: 20100203627
    Abstract: Efficient and prolonged hCFTR expression is one of the major obstacles for cystic fibrosis lung therapy. hCFTR mRNA expression levels depend on eukaryotic expression cassette components, prokaryotic backbone elements, and the gene transfer method may also influence transcriptional silencing mechanisms. A codon-optimized and CpG-reduced human CFTR gene (CO-CFTR) was made. Various vector modifications were tested to facilitate extended duration of CO-CFTR expression. Insertion of an extended 3?BGH transcribed sequence (712 bp) in an inverted orientation produced prolonged expression of CO-CFTR expression at biologically relevant levels. Further studies revealed that prolonged CO-CFTR expression is dependant on the orientation of the extended BGH 3? BGH transcribed sequence and its transcription, is not specific to the UbC promoter, and is less dependent on other vector backbone elements.
    Type: Application
    Filed: September 12, 2008
    Publication date: August 12, 2010
    Applicant: COPERNICUS THERAPEUTICS, INC.
    Inventors: Mark J. Cooper, Linas Padegimas
  • Publication number: 20090011040
    Abstract: The present invention is a method of using compacted nucleic acid (such as DNA) nanoparticles for non-viral gene transfer to various tissues of the human eye or eyes of other mammals. These nanoparticles comprise, in one embodiment, a neutrally-charged complex containing a single molecule of plasmid DNA compacted with polyethylene glycol (PEG)-substituted poly lysine peptides.
    Type: Application
    Filed: May 2, 2008
    Publication date: January 8, 2009
    Inventors: Muna I. Naash, Mark J. Cooper
  • Publication number: 20040048787
    Abstract: Counterions of polycations used to compact nucleic acids profoundly affect shape and stability of particles formed. Shape is associated with differential serum nuclease resistance and colloidal stability. A surrogate for determining such properties that is easy to measure is the turbidity parameter. Shape also affects the suitability and efficacy of compacted nucleic acid complexes for transfecting cells by various routes into a mammalian body.
    Type: Application
    Filed: September 8, 2003
    Publication date: March 11, 2004
    Applicant: Copernicus Therapeutics, Inc.
    Inventors: Mark J. Cooper, Murali K. Pasumarthy, Tomasz H. Kowalczyk, Maureen Costello
  • Publication number: 20030171322
    Abstract: Counterions of polycations used to compact nucleic acids profoundly affect shape and stability of particles formed. Shape is associated with differential serum nuclease resistance and colloidal stability. A surrogate for determining such properties that is easy to measure is the turbidity parameter. Shape also affects the suitability and efficacy of compacted nucleic acid complexes for transfecting cells by various routes into a mammalian body.
    Type: Application
    Filed: December 2, 2002
    Publication date: September 11, 2003
    Applicant: Copernicus Therapeutics, Inc.
    Inventors: Mark J. Cooper, Murali K. Pasumarthy, Tomasz H. Kowalczyk, Maureen Costello
  • Publication number: 20030134818
    Abstract: Counterions of polycations used to compact nucleic acids profoundly affect shape and stability of particles formed. Shape is associated with differential serum nuclease resistance and colloidal stability. A surrogate for determining such properties that is easy to measure is the turbidity parameter. Shape also affects the suitability and efficacy of compacted nucleic acid complexes for transfecting cells by various routes into a mammalian body.
    Type: Application
    Filed: December 2, 2002
    Publication date: July 17, 2003
    Applicant: Copernicus Therapeutics, Inc.
    Inventors: Mark J. Cooper, Murali K. Pasumarthy, Tomasz H. Kowalczyk, Maureen Costello
  • Publication number: 20030078229
    Abstract: Counterions of polycations used to compact nucleic acids profoundly affect shape and stability of particles formed. Shape is associated with differential serum nuclease resistance and colloidal stability. A surrogate for determining such properties that is easy to measure is the turbidity parameter. Shape also affects the suitability and efficacy of compacted nucleic acid complexes for transfecting cells by various routes into a mammalian body.
    Type: Application
    Filed: November 27, 2002
    Publication date: April 24, 2003
    Applicant: Copernicus Therapeutics, Inc.
    Inventors: Mark J. Cooper, Murali K. Pasumarthy, Tomasz H. Kowalczyk, Maureen Costello
  • Publication number: 20030078230
    Abstract: Counterions of polycations used to compact nucleic acids profoundly affect shape and stability of particles formed. Shape is associated with differential serum nuclease resistance and colloidal stability. A surrogate for determining such properties that is easy to measure is the turbidity parameter. Shape also affects the suitability and efficacy of compacted nucleic acid complexes for transfecting cells by various routes into a mammalian body.
    Type: Application
    Filed: November 27, 2002
    Publication date: April 24, 2003
    Applicant: Copernicus Therapeutics, Inc.
    Inventors: Mark J. Cooper, Murali K. Pasumarthy, Tomasz H. Kowalczyk, Maureen Costello
  • Patent number: 6506890
    Abstract: An automated nucleic acid compaction device for analyzing and compacting a nucleic acid complex into unimolecular nucleic acid particles. Broadly, the device includes a container support and agitation system; a measuring and testing system; and a dispensing system; all controlled by a control system. The control system controls the support and agitation system and the dispensing system based either on a predetermined formulation or by analysis of feedback data provided by the measuring and testing system. In a preferred embodiment, the device is a real-time measuring and mixing instrument operating in a closed loop system. The preferred embodiment also comprises a monitoring system including a submersible probe which is positioned in the batch solution to provide data to a controller. Once a desired level of nucleic acid compaction is reached, as detected by the monitoring system, the controller stops the dispensing and mixing agitating systems.
    Type: Grant
    Filed: November 28, 2000
    Date of Patent: January 14, 2003
    Inventors: Mark J. Cooper, Tomasz H. Kowalczyk, Murali Krishna Pasumarthy
  • Publication number: 20020160516
    Abstract: A method is described for expressing biologically functional proteins without host cell toxicity. This method takes advantage of the surprising replication activating ability of the 107/402-T antigen. The invention also provides expression vectors, human cells, and fusion proteins for practicing the method.
    Type: Application
    Filed: January 14, 2002
    Publication date: October 31, 2002
    Inventor: Mark J. Cooper
  • Patent number: 6454369
    Abstract: A pull-out keyboard tray. The pull-out keyboard tray includes an adjustable keyboard platform, removable storage compartments, and keyboard wiring protrusions. The keyboard is slightly mounted on drawer slides having multiple position detents, and is adapted for mounting under a desk top surface and the like. The keyboard further includes a removable palmrest, as well as slide shrouds for shrouding the drawer slides.
    Type: Grant
    Filed: May 4, 1999
    Date of Patent: September 24, 2002
    Assignee: Accuride International, Inc.
    Inventors: Mark J. Cooper, Kristin M. Stewart
  • Publication number: 20020043604
    Abstract: A pull-out keyboard tray. The pull-out keyboard tray includes an adjustable keyboard platform, removable storage compartments, and keyboard wiring protrusions. The keyboard is slightly mounted on drawer slides having multiple position detents, and is adapted for mounting under a desk top surface and the like. The keyboard further includes a removable palmrest, as well as slide shrouds for shrouding the drawer slides.
    Type: Application
    Filed: May 4, 1999
    Publication date: April 18, 2002
    Inventors: MARK J. COOPER, KRISTIN M. STEWART
  • Publication number: 20020042388
    Abstract: Counterions of polycations used to compact nucleic acids profoundly affect shape and stability of particles formed. Shape is associated with differential serum nuclease resistance and colloidal stability. A surrogate for determining such properties that is easy to measure is the turbidity parameter. Shape also affects the suitability and efficacy of compacted nucleic acid complexes for transfecting cells by various routes into a mammalian body.
    Type: Application
    Filed: May 31, 2001
    Publication date: April 11, 2002
    Inventors: Mark J. Cooper, Murali K. Pasumarthy, Tomasz H. Kowalczyk, Maureen Costello
  • Publication number: 20020031803
    Abstract: Novel methods are described for expression of biologically functional therapeutic and other proteins without host cell toxicity. The methods take advantage of the surprising replication activating ability of the 107/402-T antigen. The invention also provides fusion proteins, expression vectors, and mammalian cells, for practicing the methods.
    Type: Application
    Filed: August 24, 2001
    Publication date: March 14, 2002
    Inventor: Mark J. Cooper
  • Patent number: 6339065
    Abstract: Episomal plasmids containing a papovavirus origin of replication and a papovavirus large T antigen mutant form are shown to replicate episomally in human cells, and yield levels of gene expression proportional to their episomal copy number. In conjunction with liposomal or receptor-mediated delivery systems, papovavirus-derived episomal plasmids provide an alternative vector for gene therapy, particularly when utilizing strategies requiring high levels of gene expression.
    Type: Grant
    Filed: January 30, 1996
    Date of Patent: January 15, 2002
    Assignee: Case Western Reserve University
    Inventor: Mark J. Cooper
  • Patent number: 6281005
    Abstract: An automated nucleic acid compaction device for analyzing and compacting a nucleic acid complex into unimolecular nucleic acid particles. Broadly, the device includes a container support and agitation system; a measuring and testing system; and a dispensing system; all controlled by a control system. The control system controls the support and agitation system and the dispensing system based either on a predetermined formulation or by analysis of feedback data provided by the measuring and testing system. In a preferred embodiment, the device is a real-time measuring and mixing instrument operating in a closed loop system. The preferred embodiment also comprises a monitoring system including a submersible probe which is positioned in the batch solution to provide data to a controller. Once a desired level of nucleic acid compaction is reached, as detected by the monitoring system, the controller stops the dispensing and mixing agitating systems.
    Type: Grant
    Filed: May 14, 1999
    Date of Patent: August 28, 2001
    Assignee: Copernicus Therapeutics, Inc.
    Inventors: Hector L. Casal, Mark J. Cooper, Tomasz H. Kowalczyk, Murali Krishna Pasumarthy, Jose C. Perales, Steven J. Torontali
  • Patent number: D447145
    Type: Grant
    Filed: September 15, 2000
    Date of Patent: August 28, 2001
    Assignee: Accuride International Inc.
    Inventors: Mark J. Cooper, Kristin M. Stewart