Abstract: An apparatus for bioprocessing includes a housing, a drawer receivable within the housing, the drawer including a plurality of sidewalls and a bottom defining a processing chamber, and a generally open top, the drawer being movable between a closed position in which the drawer is received within the housing, and an open position in which the drawer extends from the housing enabling access to the processing chamber through the open top, and at least one bed plate positioned within the processing chamber and configured to receive a bioreactor vessel.

Abstract: An apparatus for bioprocessing includes a housing, a drawer receivable within the housing, the drawer including a plurality of sidewalls and a bottom defining a processing chamber, and a generally open top, the drawer being movable between a closed position in which the drawer is received within the housing, and an open position in which the drawer extends from the housing enabling access to the processing chamber through the open top, and at least one bed plate positioned within the processing chamber and configured to receive a bioreactor vessel.

Abstract: A bioprocessing system includes a first module configured for enriching and isolating a population of cells, a second module configured for activating, genetically modifying, and expanding the population of cells, and a third module configured for harvesting the expanded population of cells.

Abstract: Embodiments of the present invention provide one or more hardware-friendly data structures that enable efficient hardware acceleration of database operations. In particular, the present invention employs a column-store format for the database. In the database, column-groups are stored with implicit row ids (RIDs) and a RID-to-primary key column having both column-store and row-store benefits via column hopping and a heap structure for adding new data. Fixed-width column compression allow for easy hardware database processing directly on the compressed data. A global database virtual address space is utilized that allows for arithmetic derivation of any physical address of the data regardless of its location. A word compression dictionary with token compare and sort index is also provided to allow for efficient hardware-based searching of text. A tuple reconstruction process is provided as well that allows hardware to reconstruct a row by stitching together data from multiple column groups.

Abstract: Embodiments of the present invention provide hardware-friendly indexing of databases. In particular, forward and reverse indexing are utilized to allow for easy traversal of primary key to foreign key relationships. A novel structure known as a hit list also allows for easy scanning of various indexes in hardware. Group indexing is provided for flexible support of complex group key definition, such as for date range indexing and text indexing. A Replicated Reordered Column (RRC) may also be added to the group index to convert random I/O pattern into sequential I/O of only needed column elements.

Abstract: Embodiments of the present invention provide a database system that is optimized by using hardware acceleration. The system may be implemented in several variations to accommodate a wide range of queries and database sizes. In some embodiments, the system may comprise a host system that is coupled to one or more hardware accelerator components. The host system may execute software or provide an interface for receiving queries. The host system analyzes and parses these queries into tasks. The host system may then select some of the tasks and translate them into machine code instructions, which are executed by one or more hardware accelerator components. The tasks executed by hardware accelerators are generally those tasks that may be repetitive or processing intensive. Such tasks may include, for example, indexing, searching, sorting, table scanning, record filtering, and the like.

Abstract: Embodiments of the present invention provide a hardware accelerator that assists a host database system in processing its queries. The hardware accelerator comprises special purpose processing elements that are capable of receiving database query/operation tasks in the form of machine code database instructions, execute them in hardware without software, and return the query/operation result back to the host system. For example, table and column descriptors are embedded in the machine code database instructions. For ease of installation, the hardware accelerators employ a standard interconnect, such as a PCle or HT interconnect. The processing elements implement a novel dataflow design and Inter Macro-Op Communication (IMC) data structures to execute the machine code database instructions. The hardware accelerator may also comprise a relatively large memory to enhance the hardware execution of the query/operation tasks requested.

Abstract: Embodiments of the present invention provide a hardware accelerator that assists a host database system in processing its queries. The hardware accelerator comprises special purpose processing elements that are capable of receiving database query/operation tasks in the form of machine code database instructions, execute them in hardware without software, and return the query/operation result back to the host system. For example, table and column descriptors are embedded in the machine code database instructions. For ease of installation, the hardware accelerators employ a standard interconnect, such as a PCle or HT interconnect. The processing elements implement a novel dataflow design and Inter Macro-Op Communication (IMC) data structures to execute the machine code database instructions. The hardware accelerator may also comprise a relatively large memory to enhance the hardware execution of the query/operation tasks requested.

Abstract: Embodiments of the present invention provide a hardware accelerator that assists a host database system in processing its queries. The hardware accelerator comprises special purpose processing elements that are capable of receiving database query/operation tasks in the form of machine code database instructions, execute them in hardware without software, and return the query/operation result back to the host system. For example, table and column descriptors are embedded in the machine code database instructions. For ease of installation, the hardware accelerators employ a standard interconnect, such as a PCle or HT interconnect. The processing elements implement a novel dataflow design and Inter Macro-Op Communication (IMC) data structures to execute the machine code database instructions. The hardware accelerator may also comprise a relatively large memory to enhance the hardware execution of the query/operation tasks requested.

Abstract: Embodiments of the present invention provide one or more hardware-friendly data structures that enable efficient hardware acceleration of database operations. In particular, the present invention employs a column-store format for the database. In the database, column-groups are stored with implicit row ids (RIDs) and a RID-to-primary key column having both column-store and row-store benefits via column hopping and a heap structure for adding new data. Fixed-width column compression allow for easy hardware database processing directly on the compressed data. A global database virtual address space is utilized that allows for arithmetic derivation of any physical address of the data regardless of its location. A word compression dictionary with token compare and sort index is also provided to allow for efficient hardware-based searching of text. A tuple reconstruction process is provided as well that allows hardware to reconstruct a row by stitching together data from multiple column groups.

Abstract: Embodiments of the present invention provide a hardware accelerator that assists a host database system in processing its queries. The hardware accelerator comprises special purpose processing elements that are capable of receiving database query/operation tasks in the form of machine code database instructions, execute them in hardware without software, and return the query/operation result back to the host system. For example, table and column descriptors are embedded in the machine code database instructions. For ease of installation, the hardware accelerators employ a standard interconnect, such as a PCle or HT interconnect. The processing elements implement a novel dataflow design and Inter Macro-Op Communication (IMC) data structures to execute the machine code database instructions. The hardware accelerator may also comprise a relatively large memory to enhance the hardware execution of the query/operation tasks requested.

Abstract: Embodiments of the present invention provide a hardware accelerator that assists a host database system in processing its queries. The hardware accelerator comprises special purpose processing elements that are capable of receiving database query/operation tasks in the form of machine code database instructions, execute them in hardware without software, and return the query/operation result back to the host system. For example, table and column descriptors are embedded in the machine code database instructions. For ease of installation, the hardware accelerators employ a standard interconnect, such as a PCle or HT interconnect. The processing elements implement a novel dataflow design and Inter Macro-Op Communication (IMC) data structures to execute the machine code database instructions. The hardware accelerator may also comprise a relatively large memory to enhance the hardware execution of the query/operation tasks requested.

Abstract: Embodiments of the present invention provide a hardware accelerator that assists a host database system in processing its queries. The hardware accelerator comprises special purpose processing elements that are capable of receiving database query/operation tasks in the form of machine code database instructions, execute them in hardware without software, and return the query/operation result back to the host system. For example, table and column descriptors are embedded in the machine code database instructions. For ease of installation, the hardware accelerators employ a standard interconnect, such as a PCle or HT interconnect. The processing elements implement a novel dataflow design and Inter Macro-Op Communication (IMC) data structures to execute the machine code database instructions. The hardware accelerator may also comprise a relatively large memory to enhance the hardware execution of the query/operation tasks requested.

Abstract: Embodiments of the present invention provide one or more hardware-friendly data structures that enable efficient hardware acceleration of database operations. In particular, the present invention employs a column-store format for the database. In the database, column-groups are stored with implicit row ids (RIDs) and a RID-to-primary key column having both column-store and row-store benefits via column hopping and a heap structure for adding new data. Fixed-width column compression allow for easy hardware database processing directly on the compressed data. A global database virtual address space is utilized that allows for arithmetic derivation of any physical address of the data regardless of its location. A word compression dictionary with token compare and sort index is also provided to allow for efficient hardware-based searching of text. A tuple reconstruction process is provided as well that allows hardware to reconstruct a row by stitching together data from multiple column groups.

Abstract: A scalable solution to managing congestion in a network is disclosed. In one implementation, such a solution comprises a means for managing traffic including at least one flow monitor and a plurality of flow control regulators that together manage congestion within a network. Each of the flow control regulators monitor traffic at a corresponding ingress point and determine a state of the ingress point corresponding to the traffic monitored at the ingress point. Each flow control regulators forward the state (or information representative of the state) to the flow monitor. The flow monitor detects congestion based upon the states of the flow control regulators and, in the event of congestion, determines a target bandwidth for the ingress points. The flow monitor provides a control signal to at least one of the flow control regulators, and at least one of the flow control regulators control flows at its corresponding ingress point based upon the control signal received from the flow monitor.

Abstract: Embodiments of the present invention provide a hardware accelerator that assists a host database system in processing its queries. The hardware accelerator comprises special purpose processing elements that are capable of receiving database query/operation tasks in the form of machine code database instructions, execute them in hardware without software, and return the query/operation result back to the host system. For example, table and column descriptors are embedded in the machine code database instructions. For ease of installation, the hardware accelerators employ a standard interconnect, such as a PCIe or HT interconnect. The processing elements implement a novel dataflow design and Inter Macro-Op Communication (IMC) data structures to execute the machine code database instructions. The hardware accelerator may also comprise a relatively large memory to enhance the hardware execution of the query/operation tasks requested.

Abstract: A multi-level content addressable memory (CAM) architecture compresses out much of the redundancy encountered in the search space of a single CAM, particularly for flow-based lookups in a network. Destination and source address may be associated with internal equivalence classes independently in one level of the multi-level CAM architecture, while flow-specific properties linking arbitrary classes of the destination and source addresses may be applied in a later level of the multi-level CAM.

Abstract: Embodiments of the present invention generate and optimize query plans that are at least partially executable in hardware. Upon receiving a query, the query is rewritten and optimized with a bias for hardware execution of fragments of the query. A template-based algorithm may be employed for transforming a query into fragments and then into query tasks. The various query tasks can then be routed to either a hardware accelerator, a software module, or sent back to a database management system for execution. For those tasks routed to the hardware accelerator, the query tasks are compiled into machine code database instructions.

Abstract: A multi-level content addressable memory (CAM) architecture compresses out much of the redundancy encountered in the search space of a single CAM, particularly for flow-based lookups in a network. Destination and source address may be associated with internal equivalence classes independently in one level of the multi-level CAM architecture, while flow-specific properties linking arbitrary classes of the destination and source addresses may be applied in a later level of the multi-level CAM.

Abstract: Embodiments of the present invention provide hardware-friendly indexing of databases. In particular, forward and reverse indexing are utilized to allow for easy traversal of primary key to foreign key relationships. A novel structure known as a hit list also allows for easy scanning of various indexes in hardware. Group indexing is provided for flexible support of complex group key definition, such as for date range indexing and text indexing. A Replicated Reordered Column (RRC) may also be added to the group index to convert random I/O pattern into sequential I/O of only needed column elements.