Patents by Inventor Michael Koepke

Michael Koepke has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20230129301
    Abstract: The disclosure provides genetically engineered C1-fixing microorganisms capable of producing nanobodies. Additionally, the disclosure provides engineered microorganisms comprising one or more disrupted genes to strategically divert carbon flux away from nonessential or undesirable products towards products and/or co-products of interest. The disclosure enables co-production of useful chemicals from gaseous substrates.
    Type: Application
    Filed: July 18, 2022
    Publication date: April 27, 2023
    Inventors: Nicholas Alexander Fackler, Sean Dennis Simpson, Michael Koepke, Stephanie Rhianon Jones
  • Publication number: 20230092645
    Abstract: The disclosure relates to methods of capturing carbon by microbial fermentation of a gaseous substrate comprising CO into one or more first products which, in turn, may be incorporated into an article of manufacture or one or more second products. Further, the disclosure relates to improving carbon capture and/or efficiency.
    Type: Application
    Filed: April 22, 2022
    Publication date: March 23, 2023
    Inventors: Jennifer Rosa Holmgren, Sean Dennis Simpson, Michael Koepke, Robert John Conrado, Ralph Dwayne Gillespie
  • Publication number: 20230090600
    Abstract: The disclosure provides a method for producing an isoprenoid alcohol, isoprenoid alcohol derivative, or a terpene precursor thereof by microbial fermentation. Typically, the method involves culturing a recombinant bacterium in the presence of a gaseous substrate whereby the bacterium produces an isoprenoid alcohol, isoprenoid alcohol derivative, terpene or a precursor thereof. The microorganism may comprise one or more exogenous enzymes.
    Type: Application
    Filed: August 22, 2022
    Publication date: March 23, 2023
    Inventors: Sean Dennis Simpson, Michael Koepke, Rupert Oliver John Norman, Shivani Garg
  • Publication number: 20230084118
    Abstract: The invention provides genetically engineered microorganisms and methods for the biological production of ethylene glycol and precursors of ethylene glycol. In particular, the microorganism of the invention produces ethylene glycol or a precursor of ethylene glycol through one or more of 5,10-methylenetetrahydrofolate, oxaloacetate, citrate, malate, and glycine. The invention further provides compositions comprising ethylene glycol or polymers of ethylene glycol such as polyethylene terephthalate.
    Type: Application
    Filed: September 14, 2022
    Publication date: March 16, 2023
    Inventors: Michael Koepke, Rasmus Jensen
  • Publication number: 20230065430
    Abstract: The disclosure provides genetically engineered microorganisms and methods for improved biological production of ethylene glycol and precursors of ethylene glycol. The microorganism of the disclosure produces ethylene glycol or a precursor of ethylene glycol through one or more of 5,10-methylenetetrahydrofolate, oxaloacetate, citrate, malate, and glycine. The disclosure further provides compositions comprising ethylene glycol or polymers of ethylene glycol such as polyethylene terephthalate.
    Type: Application
    Filed: August 5, 2022
    Publication date: March 2, 2023
    Inventors: Zachary Robert Cowden, Ching Leang, Michael Koepke, Rasmus Overgaard Jensen, Alexander Paul Mueller
  • Publication number: 20230059296
    Abstract: What is described is an integrated steel mill and a bioreactor configured to produce useful products from the waste stream of the steel mill. A waste gas stack which is connected to the steel mill is connected to a heat exchanger to cool the waste gas from the steel mill. The cooled gas is pressurized using a pressurization apparatus connected to the heat exchanger. The pressurized gas is sent to an oxygen removal apparatus connected to the pressurization apparatus. An oxygen depleted waste stream from the oxygen removal apparatus is passed to a bioreactor (connected to the oxygen removal apparatus) where microorganisms ferment the waste stream to products. Optional apparatus such as scrubbers, valves, buffers, are also disclosed. The products of the fermentation in the bioreactor can be ethanol and or acetate.
    Type: Application
    Filed: September 23, 2022
    Publication date: February 23, 2023
    Inventors: Sean Dennis Simpson, Christophe Collet, Michael Cockrem, Simon David Oakley, Michael Koepke
  • Publication number: 20230050887
    Abstract: The disclosure provides genetically engineered microorganisms capable of producing antigen-binding molecules. Additionally, the disclosure provides engineered microorganisms comprising one or more disrupted genes to strategically divert carbon flux away from undesirable products towards products, and optionally co-products, of interest. Further, the disclosure enables co-production of useful chemicals from gaseous substrates.
    Type: Application
    Filed: July 18, 2022
    Publication date: February 16, 2023
    Inventors: Nicholas Alexander Fackler, Sean Dennis Simpson, Michael Koepke, Stephanie Rhianon Jones
  • Publication number: 20230015505
    Abstract: Disclosed are compositions, methods, and kits for performing cell-free protein synthesis (CFPS) and for expressing proteins in cells. Particularly disclosed are vectors comprising Golden Gate sites for cloning, methods for preparing such vectors, and the use thereof for performing CFPS and for expressing proteins in cells such as in naturally occurring or recombinant species of Clostridia, including Clostridium autoethanogenum.
    Type: Application
    Filed: December 3, 2020
    Publication date: January 19, 2023
    Applicants: Northwestern University, LanzaTech, Inc.
    Inventors: Michael C. JEWETT, Ashty S. KARIM, Michael KOEPKE, Darmawi JUMINAGA, Fungmin LIEW
  • Publication number: 20230013524
    Abstract: The invention provides a method for producing a terpene or a precursor thereof by microbial fermentation. Typically, the method involves culturing a recombinant bacterium in the presence of a gaseous substrate whereby the bacterium produces a terpene or a precursor thereof, such as mevalonic acid, isopentenyl pyrophosphate, dimethylallyl pyrophosphate, isoprene, geranyl pyrophosphate, farnesyl pyrophosphate, and/or farnesene. The bacterium may comprise one or more exogenous enzymes, such as enzymes in mevalonate, DXS, or terpene biosynthesis pathways.
    Type: Application
    Filed: August 30, 2022
    Publication date: January 19, 2023
    Inventor: Michael Koepke
  • Patent number: 11555209
    Abstract: The invention provides genetically engineered microorganisms and methods for the biological production of ethylene glycol and precursors of ethylene glycol. In particular, the microorganism of the invention produces ethylene glycol or a precursor of ethylene glycol through one or more of 5,10-methylenetetrahydrofolate, oxaloacetate, citrate, malate, and glycine. The invention further provides compositions comprising ethylene glycol or polymers of ethylene glycol such as polyethylene terephthalate.
    Type: Grant
    Filed: December 19, 2018
    Date of Patent: January 17, 2023
    Assignee: LanzaTech, Inc.
    Inventors: Michael Koepke, Rasmus Jensen
  • Patent number: 11549103
    Abstract: Provided is a method of producing a product by culturing a carboxydotrophic acetogenic bacterium with a disrupting mutation in a lactate dehydrogenase enzyme in the presence of a substrate comprising CO, CO2, and/or H2. Preferably, the disrupting mutation reduces or eliminates the expression or activity of the enzyme such that the bacterium produces a reduced amount of lactate or no lactate.
    Type: Grant
    Filed: April 23, 2020
    Date of Patent: January 10, 2023
    Assignee: LanzaTech NZ, Inc.
    Inventors: Shilpa Nagaraju, Bakir Al-Sinawi, Sashini De Tissera, Michael Koepke
  • Patent number: 11459589
    Abstract: The invention provides a method for producing a terpene or a precursor thereof by microbial fermentation. Typically, the method involves culturing a recombinant bacterium in the presence of a gaseous substrate whereby the bacterium produces a terpene or a precursor thereof, such as mevalonic acid, isopentenyl pyrophosphate, dimethylallyl pyrophosphate, isoprene, geranyl pyrophosphate, farnesyl pyrophosphate, and/or farnesene. The bacterium may comprise one or more exogenous enzymes, such as enzymes in mevalonate, DXS, or terpene biosynthesis pathways.
    Type: Grant
    Filed: November 11, 2020
    Date of Patent: October 4, 2022
    Assignee: LanzaTech NZ, Inc.
    Inventor: Michael Koepke
  • Patent number: 11441149
    Abstract: The invention provides methods of genetically engineering a C1-fixing bacterium using a Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)/CRISPR-associated (Cas) (CRISPR/Cas) system. Preferably, the Cas protein is under the control of an inducible promoter.
    Type: Grant
    Filed: February 26, 2017
    Date of Patent: September 13, 2022
    Assignee: LanzaTech NZ, Inc.
    Inventors: Shilpa Nagaraju, Michael Koepke
  • Publication number: 20220282289
    Abstract: Microorganisms are genetically engineered to produce various chemicals for industrial use. The microorganisms are carboxydotrophic acetogens. The microorganisms produce acetyl-CoA using the Wood-Ljungdahl Pathway for fixing CO/CO2. A reverse beta-oxidation pathway cycle from a microorganism that contains such a group of enzymes is introduced. Additionally, primers and extenders, and/or genes encoding for enzymes that generate primers and extenders may also be introduced. Product synthesis can be effected by improved promoters or enzyme designs that are catalytically more efficient. Similarly, product synthesis may also be improved by deleting competing reactions.
    Type: Application
    Filed: March 8, 2022
    Publication date: September 8, 2022
    Inventors: Shivani Garg, Michael Koepke
  • Publication number: 20220251573
    Abstract: Microorganisms are genetically engineered to produce 3-hydroxypropionate (3-HP). The microorganisms are carboxydotrophic acetogens. The microorganisms produce acetyl-coA using the Wood-Ljungdahl pathway for fixing CO/CO2. A ?-alanine pyruvate aminotransferase from a microorganism that contains such an enzyme is introduced. Additionally, an acetyl-coA carboxylase may also be introduced. The production of 3-HP can be improved. This can be effected by improved promoters or higher copy number or enzymes that are catalytically more efficient.
    Type: Application
    Filed: February 7, 2022
    Publication date: August 11, 2022
    Inventors: Fungmin Liew, Michael Koepke
  • Publication number: 20220213517
    Abstract: The invention provides microorganisms and methods for the production of polyhydroxybutyrate (PHB) from gaseous substrates. In particular, the invention provides a non-naturally occurring Wood-Ljungdahl microorganism comprising (a) an enzyme that converts acetyl-CoA to acetoacetyl-CoA, (b) an enzyme that converts acetoacetyl-CoA to 3-hydroxybutyryl-CoA, and (c) an enzyme that converts 3-hydroxybutyryl-CoA to polyhydroxybutyrate, and methods related thereto.
    Type: Application
    Filed: March 25, 2022
    Publication date: July 7, 2022
    Inventors: Ryan Christopher Tappel, James Bruce Yarnton Haycock Behrendorff, Michael Koepke, Esteban Marcellin, Renato de Souza Pinto Lemgruber, Kaspar Valgepea, Lars Nielsen
  • Patent number: 11306333
    Abstract: The invention provides microorganisms and methods for the production of polyhydroxybutyrate (PHB) from gaseous substrates. In particular, the invention provides a non-naturally occurring Wood-Ljungdahl microorganism comprising (a) an enzyme that converts acetyl-CoA to acetoacetyl-CoA, (b) an enzyme that converts acetoacetyl-CoA to 3-hydroxybutyryl-CoA, and (c) an enzyme that converts 3-hydroxybutyryl-CoA to polyhydroxybutyrate, and methods related thereto.
    Type: Grant
    Filed: October 4, 2018
    Date of Patent: April 19, 2022
    Assignee: LanzaTech, Inc.
    Inventors: Ryan Christopher Tappel, James Bruce Yarnton Haycock Behrendorff, Michael Koepke, Esteban Marcellin, Renato de Souza Pinto Lemgruber, Kaspar Valgepea, Lars Nielsen
  • Publication number: 20210340579
    Abstract: Provided herein are microorganisms and methods for fermentative production of ß-ketoadipate from gaseous substrates such as carbon dioxide (CO2), carbon monoxide (CO), and/or hydrogen (H2). Additionally, the processes provided herein are methods for producing polymers containing ß-ketoadipate, that can potentially enable a circular economy by diverting waste, e.g., plastic waste.
    Type: Application
    Filed: April 27, 2021
    Publication date: November 4, 2021
    Inventors: James Daniell, Michael Koepke, Rasmus Overgaard Jensen
  • Publication number: 20210292732
    Abstract: Disclosed herein are methods for production of 2-phenylethanol by microbial fermentation of substrates comprising carbon monoxide and/or carbon dioxide and further disclosed are genetically modified microorganisms for use in such methods. Additionally, the processes disclosed herein are improved methods of 2-PE production that alleviate dependence on natural and petrochemical processes.
    Type: Application
    Filed: January 15, 2021
    Publication date: September 23, 2021
    Inventors: Fungmin Liew, Michael Koepke, Shilpa Nagaraju, Audrey Harris
  • Publication number: 20210230648
    Abstract: The invention provides methods for improving efficiency of fermentation by arginine supplementation, and genetically modified bacterium for use therefor. More particularly the invention provides methods for (i) increasing the production ATP intensive products with arginine supplementation, (ii) increasing utilization of arginine by a C1-fixing bacterium; and (iii) providing C1-fixing bacterium with optimized arginine de-aminase pathways.
    Type: Application
    Filed: March 16, 2021
    Publication date: July 29, 2021
    Inventors: Kaspar Valgepea, Michael Koepke, James Bruce Yarnton Haycock Behrendorff, Esteban Marcellin, Lars K. Nielsen, Renato de S.P. Lemgruber