Patents by Inventor Michael Koepke

Michael Koepke has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 11965201
    Abstract: The invention provides methods for improving efficiency of fermentation by arginine supplementation, and genetically modified bacterium for use therefor. More particularly the invention provides methods for (i) increasing the production ATP intensive products with arginine supplementation, (ii) increasing utilization of arginine by a C1-fixing bacterium; and (iii) providing C1-fixing bacterium with optimized arginine de-aminase pathways.
    Type: Grant
    Filed: March 16, 2021
    Date of Patent: April 23, 2024
    Assignee: LanzaTech NZ, Inc.
    Inventors: Kaspar Valgepea, Michael Koepke, James Bruce Yarnton Haycock Behrendorff, Esteban Marcellin, Lars K. Nielsen, Renato de S. P. Lemgruber
  • Patent number: 11952607
    Abstract: The disclosure provides genetically engineered microorganisms and methods for improved biological production of ethylene glycol and precursors of ethylene glycol. The microorganism of the disclosure produces ethylene glycol or a precursor of ethylene glycol through one or more of 5,10-methylenetetrahydrofolate, oxaloacetate, citrate, malate, and glycine. The disclosure further provides compositions comprising ethylene glycol or polymers of ethylene glycol such as polyethylene terephthalate.
    Type: Grant
    Filed: August 5, 2022
    Date of Patent: April 9, 2024
    Assignee: LanzaTech, Inc.
    Inventors: Zachary Robert Cowden, Ching Leang, Michael Koepke, Rasmus Overgaard Jensen, Alexander Paul Mueller
  • Publication number: 20240026413
    Abstract: Microorganisms are genetically engineered to continuously co-produce amino acids, high-value, specialized proteins, microbial biomass, chemicals, or any combination thereof by microbial fermentation, particularly by microbial fermentation of a gaseous substrate. The microorganisms are C1-fixing. The production of ethylene, microbial biomass, and heterologous high-value, specialized proteins can be improved. This can be improved by varying promoters or nutrient limiting means.
    Type: Application
    Filed: June 21, 2023
    Publication date: January 25, 2024
    Inventors: Sean Dennis Simpson, Michael Koepke, James MacAllister Clomburg, Juniper Dee Gramling, Stephanie Rhianon Jones, Jaeyoung Jung, Timothy James Politano, Ryan Christopher Tappel
  • Publication number: 20240018527
    Abstract: Microorganisms are genetically engineered to produce 3-hydroxypropionate (3-HP). The microorganisms are carboxydotrophic acetogens. The microorganisms produce acetyl-coA using the Wood-Ljungdahl pathway for fixing CO/CO2. A ?-alanine pyruvate aminotransferase from a microorganism that contains such an enzyme is introduced. Additionally, an acetyl-coA carboxylase may also be introduced. The production of 3-HP can be improved. This can be effected by improved promoters or higher copy number or enzymes that are catalytically more efficient.
    Type: Application
    Filed: August 28, 2023
    Publication date: January 18, 2024
    Inventors: Fungmin Liew, Michael Koepke
  • Publication number: 20230407346
    Abstract: The disclosure relates to the system comprising a combination of a primary bioreactor with a secondary bioreactor to convert a gaseous stream comprising CO and optionally H2, or CO2 and H2 to at least one target product. Bioreactors may be any combination of aerobic and anaerobic, batch and continuous. The bioreactors comprise fermenting microorganisms that may typically be bacterial or fungal.
    Type: Application
    Filed: August 28, 2023
    Publication date: December 21, 2023
    Inventors: Sean Dennis Simpson, Allan Haiming Gao, Robert John Conrado, James Daniel Winkler, Alexander Paul Mueller, Steven Brown, Loan Phuong Tran, Michael Koepke, Christophe Daniel Mihalcea
  • Publication number: 20230407362
    Abstract: Microorganisms are genetically engineered to continuously co-produce amino acids, proteins, microbial biomass, chemicals, or any combination thereof by microbial fermentation, particularly by microbial fermentation of a gaseous substrate. The microorganisms are C1-fixing. The production of ethylene, microbial biomass, and heterologous tandem repeat proteins can be improved. This can be effected by improved promoters or nutrient limiting means.
    Type: Application
    Filed: June 21, 2023
    Publication date: December 21, 2023
    Inventors: Sean Dennis Simpson, Michael Koepke, James MacAllister Clomburg, Juniper Dee Gramling, Stephanie Rhianon Jones, Jaeyoung Jung, Timothy James Politano
  • Publication number: 20230407271
    Abstract: Methods and microorganisms are genetically engineered to continuously produce ethylene by microbial fermentation, particularly by the microbial fermentation of a gaseous substrate. The microorganisms are C1-fixing. Further, the gaseous substrate comprises CO2 and an energy source. The production of ethylene can be improved by varying promoters or nutrient limiting means.
    Type: Application
    Filed: June 21, 2023
    Publication date: December 21, 2023
    Inventors: Sean Dennis Simpson, Jennifer Rosa Holmgren, James MacAllister Clomburg, Jim Jeffrey Daleiden, Audrey Jean Harris, Stephanie Rhianon Jones, Michael Koepke, Timothy James Politano
  • Patent number: 11788103
    Abstract: The disclosure relates to the combination of a primary fermentation that converts gas to acetate with a secondary fermentation that converts acetate to a target product. Preferably, the gas contains carbon dioxide, such that the disclosure enables the fixation of carbon dioxide into useful products. The fermentations may be any combination of aerobic and anaerobic, batch and continuous. The fermenting microorganisms may typically be bacterial or fungal.
    Type: Grant
    Filed: July 24, 2020
    Date of Patent: October 17, 2023
    Assignee: LanzaTech, Inc.
    Inventors: Sean Dennis Simpson, Allan Haiming Gao, Robert John Conrado, James Daniel Winkler, Alexander Paul Mueller, Steven Brown, Loan Phuong Tran, Michael Koepke, Christophe Daniel Mihalcea
  • Patent number: 11788092
    Abstract: Microorganisms are genetically engineered to produce 3-hydroxypropionate (3-HP). The microorganisms are carboxydotrophic acetogens. The microorganisms produce acetyl-coA using the Wood-Ljungdahl pathway for fixing CO/CO2. A ?-alanine pyruvate aminotransferase from a microorganism that contains such an enzyme is introduced. Additionally, an acetyl-coA carboxylase may also be introduced. The production of 3-HP can be improved. This can be effected by improved promoters or higher copy number or enzymes that are catalytically more efficient.
    Type: Grant
    Filed: February 7, 2022
    Date of Patent: October 17, 2023
    Assignee: LanzaTech, Inc.
    Inventors: Fungmin Liew, Michael Koepke
  • Publication number: 20230129301
    Abstract: The disclosure provides genetically engineered C1-fixing microorganisms capable of producing nanobodies. Additionally, the disclosure provides engineered microorganisms comprising one or more disrupted genes to strategically divert carbon flux away from nonessential or undesirable products towards products and/or co-products of interest. The disclosure enables co-production of useful chemicals from gaseous substrates.
    Type: Application
    Filed: July 18, 2022
    Publication date: April 27, 2023
    Inventors: Nicholas Alexander Fackler, Sean Dennis Simpson, Michael Koepke, Stephanie Rhianon Jones
  • Publication number: 20230090600
    Abstract: The disclosure provides a method for producing an isoprenoid alcohol, isoprenoid alcohol derivative, or a terpene precursor thereof by microbial fermentation. Typically, the method involves culturing a recombinant bacterium in the presence of a gaseous substrate whereby the bacterium produces an isoprenoid alcohol, isoprenoid alcohol derivative, terpene or a precursor thereof. The microorganism may comprise one or more exogenous enzymes.
    Type: Application
    Filed: August 22, 2022
    Publication date: March 23, 2023
    Inventors: Sean Dennis Simpson, Michael Koepke, Rupert Oliver John Norman, Shivani Garg
  • Publication number: 20230092645
    Abstract: The disclosure relates to methods of capturing carbon by microbial fermentation of a gaseous substrate comprising CO into one or more first products which, in turn, may be incorporated into an article of manufacture or one or more second products. Further, the disclosure relates to improving carbon capture and/or efficiency.
    Type: Application
    Filed: April 22, 2022
    Publication date: March 23, 2023
    Inventors: Jennifer Rosa Holmgren, Sean Dennis Simpson, Michael Koepke, Robert John Conrado, Ralph Dwayne Gillespie
  • Publication number: 20230084118
    Abstract: The invention provides genetically engineered microorganisms and methods for the biological production of ethylene glycol and precursors of ethylene glycol. In particular, the microorganism of the invention produces ethylene glycol or a precursor of ethylene glycol through one or more of 5,10-methylenetetrahydrofolate, oxaloacetate, citrate, malate, and glycine. The invention further provides compositions comprising ethylene glycol or polymers of ethylene glycol such as polyethylene terephthalate.
    Type: Application
    Filed: September 14, 2022
    Publication date: March 16, 2023
    Inventors: Michael Koepke, Rasmus Jensen
  • Publication number: 20230065430
    Abstract: The disclosure provides genetically engineered microorganisms and methods for improved biological production of ethylene glycol and precursors of ethylene glycol. The microorganism of the disclosure produces ethylene glycol or a precursor of ethylene glycol through one or more of 5,10-methylenetetrahydrofolate, oxaloacetate, citrate, malate, and glycine. The disclosure further provides compositions comprising ethylene glycol or polymers of ethylene glycol such as polyethylene terephthalate.
    Type: Application
    Filed: August 5, 2022
    Publication date: March 2, 2023
    Inventors: Zachary Robert Cowden, Ching Leang, Michael Koepke, Rasmus Overgaard Jensen, Alexander Paul Mueller
  • Publication number: 20230059296
    Abstract: What is described is an integrated steel mill and a bioreactor configured to produce useful products from the waste stream of the steel mill. A waste gas stack which is connected to the steel mill is connected to a heat exchanger to cool the waste gas from the steel mill. The cooled gas is pressurized using a pressurization apparatus connected to the heat exchanger. The pressurized gas is sent to an oxygen removal apparatus connected to the pressurization apparatus. An oxygen depleted waste stream from the oxygen removal apparatus is passed to a bioreactor (connected to the oxygen removal apparatus) where microorganisms ferment the waste stream to products. Optional apparatus such as scrubbers, valves, buffers, are also disclosed. The products of the fermentation in the bioreactor can be ethanol and or acetate.
    Type: Application
    Filed: September 23, 2022
    Publication date: February 23, 2023
    Inventors: Sean Dennis Simpson, Christophe Collet, Michael Cockrem, Simon David Oakley, Michael Koepke
  • Publication number: 20230050887
    Abstract: The disclosure provides genetically engineered microorganisms capable of producing antigen-binding molecules. Additionally, the disclosure provides engineered microorganisms comprising one or more disrupted genes to strategically divert carbon flux away from undesirable products towards products, and optionally co-products, of interest. Further, the disclosure enables co-production of useful chemicals from gaseous substrates.
    Type: Application
    Filed: July 18, 2022
    Publication date: February 16, 2023
    Inventors: Nicholas Alexander Fackler, Sean Dennis Simpson, Michael Koepke, Stephanie Rhianon Jones
  • Publication number: 20230013524
    Abstract: The invention provides a method for producing a terpene or a precursor thereof by microbial fermentation. Typically, the method involves culturing a recombinant bacterium in the presence of a gaseous substrate whereby the bacterium produces a terpene or a precursor thereof, such as mevalonic acid, isopentenyl pyrophosphate, dimethylallyl pyrophosphate, isoprene, geranyl pyrophosphate, farnesyl pyrophosphate, and/or farnesene. The bacterium may comprise one or more exogenous enzymes, such as enzymes in mevalonate, DXS, or terpene biosynthesis pathways.
    Type: Application
    Filed: August 30, 2022
    Publication date: January 19, 2023
    Inventor: Michael Koepke
  • Publication number: 20230015505
    Abstract: Disclosed are compositions, methods, and kits for performing cell-free protein synthesis (CFPS) and for expressing proteins in cells. Particularly disclosed are vectors comprising Golden Gate sites for cloning, methods for preparing such vectors, and the use thereof for performing CFPS and for expressing proteins in cells such as in naturally occurring or recombinant species of Clostridia, including Clostridium autoethanogenum.
    Type: Application
    Filed: December 3, 2020
    Publication date: January 19, 2023
    Applicants: Northwestern University, LanzaTech, Inc.
    Inventors: Michael C. JEWETT, Ashty S. KARIM, Michael KOEPKE, Darmawi JUMINAGA, Fungmin LIEW
  • Patent number: 11555209
    Abstract: The invention provides genetically engineered microorganisms and methods for the biological production of ethylene glycol and precursors of ethylene glycol. In particular, the microorganism of the invention produces ethylene glycol or a precursor of ethylene glycol through one or more of 5,10-methylenetetrahydrofolate, oxaloacetate, citrate, malate, and glycine. The invention further provides compositions comprising ethylene glycol or polymers of ethylene glycol such as polyethylene terephthalate.
    Type: Grant
    Filed: December 19, 2018
    Date of Patent: January 17, 2023
    Assignee: LanzaTech, Inc.
    Inventors: Michael Koepke, Rasmus Jensen
  • Patent number: 11549103
    Abstract: Provided is a method of producing a product by culturing a carboxydotrophic acetogenic bacterium with a disrupting mutation in a lactate dehydrogenase enzyme in the presence of a substrate comprising CO, CO2, and/or H2. Preferably, the disrupting mutation reduces or eliminates the expression or activity of the enzyme such that the bacterium produces a reduced amount of lactate or no lactate.
    Type: Grant
    Filed: April 23, 2020
    Date of Patent: January 10, 2023
    Assignee: LanzaTech NZ, Inc.
    Inventors: Shilpa Nagaraju, Bakir Al-Sinawi, Sashini De Tissera, Michael Koepke