Patents by Inventor Michael Koepke

Michael Koepke has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 9297026
    Abstract: The invention relates to methods for the production of chemical compounds, particularly but not exclusively ethanol, by microbial fermentation. Also described are genetically modified micro-organisms capable of using carbon monoxide to produce one or more products, particularly but not exclusively ethanol as a main product, and producing a reduced amount or substantially no 2,3-butanediol and/or a precursor thereof.
    Type: Grant
    Filed: May 4, 2015
    Date of Patent: March 29, 2016
    Assignee: LanzaTech New Zealand Limited
    Inventors: Michael Koepke, Shilpa Nagaraju, Wendy Yiting Chen
  • Patent number: 9284564
    Abstract: A stereospecific enzyme in C. autoethanogenum permits the conversion of racemic propanediol to acetone and/or propionaldehyde. Entantiomeric starting materials lead to different products. If desired, the products may be reduced to form alcohols. The reaction can be performed in various host cells, so that various materials may be used as carbon and/or energy sources.
    Type: Grant
    Filed: August 28, 2013
    Date of Patent: March 15, 2016
    Assignee: LanzaTech New Zealand Limited
    Inventors: Alexander Paul Mueller, Michael Koepke
  • Publication number: 20160040193
    Abstract: The invention provides genetically engineered microorganisms with altered carbon monoxide dehydrogenase (CODH) activity and methods related thereto. In particular, the invention provides a genetically engineered carboxydotrophic acetogenic bacterium having decreased or eliminated activity of CODH1 and/or CODH2. In certain embodiments, the bacterium may also have increased activity of CODH/ACS. The invention further provides a method for producing a product by culturing the bacterium in the presence of a gaseous substrate comprising one or more of carbon monoxide, carbon dioxide, and hydrogen.
    Type: Application
    Filed: June 29, 2015
    Publication date: February 11, 2016
    Applicant: LANZATECH NEW ZEALAND LIMITED
    Inventors: Michael Koepke, Fungmin Liew
  • Publication number: 20160017276
    Abstract: The invention provides a novel bacterium with improved properties, including improved ethanol production, ethanol productivity, CO uptake, specific growth rate, ethanol to acetate ratio, and alcohol tolerance. The bacterium may be derived from Clostridium autoethanogenum and/or may comprise at least one DNA or amino acid sequence selected from SEQ ID NOs: 1, 3, 6, 8, 10, 12, 14, and 16. In one embodiment, the bacterium is Clostridium autoethanogenum deposited under DSMZ accession number DSM23693 or a bacterium derived therefrom.
    Type: Application
    Filed: October 5, 2015
    Publication date: January 21, 2016
    Inventors: Bjorn Daniel Heijstra, Evgenia Kern, Michael Koepke, Simon Segovia, Fungmin Liew
  • Publication number: 20150376654
    Abstract: The invention relates to a recombinant carboxydotrophic acetogenic microorganism capable of producing one or more products by fermentation of a substrate comprising CO, wherein the microorganism has an increased tolerance to ethanol versus a parental carboxydotrophic acetogenic microorganism. The invention also provides, inter alia, methods for the production of ethanol and one or more other products from a substrate comprising CO using the recombinant carboxydotrophic acetogenic microorganism.
    Type: Application
    Filed: August 17, 2015
    Publication date: December 31, 2015
    Inventors: Michael Koepke, FungMin Liew, Sean Dennis Simpson
  • Publication number: 20150353965
    Abstract: The invention relates to methods of capturing carbon by microbial fermentation of a gaseous substrate comprising CO. The methods of the invention include converting CO to one or more products including alcohols and/or acids and optionally capturing CO2 to improve overall carbon capture. In certain aspects, the invention relates to processes for producing alcohols, particularly ethanol, from industrial waste streams, particularly steel mill off-gas.
    Type: Application
    Filed: August 18, 2015
    Publication date: December 10, 2015
    Inventors: Sean Dennis Simpson, Christophe Collet, Michael Cockrem, Simon David Oakley, Michael Koepke
  • Publication number: 20150299737
    Abstract: The invention relates to methods for the production of chemical compounds, particularly but not exclusively ethanol, by microbial fermentation. Also described are genetically modified micro-organisms capable of using carbon monoxide to produce one or more products, particularly but not exclusively ethanol as a main product, and producing a reduced amount or substantially no 2,3-butanediol and/or a precursor thereof.
    Type: Application
    Filed: May 4, 2015
    Publication date: October 22, 2015
    Inventors: Michael Koepke, Shilpa Nagaraju, Wendy Yiting Chen
  • Publication number: 20150284692
    Abstract: The invention provides, inter alia, methods for the production of acetone, isopropanol and/or precursors of acetone and/or isopropanol by microbial fermentation of substrates comprising CO, genetically modified microorganisms of use in such methods, nucleic acids suitable for preparation of genetically modified microorganisms, a novel alcohol dehydrogenase and nucleic acids encoding same.
    Type: Application
    Filed: February 23, 2012
    Publication date: October 8, 2015
    Inventors: Michael Koepke, Sean Simpson, FungMin Liew, Wendy Chen
  • Patent number: 9127296
    Abstract: The disclosure relates to methods of capturing carbon by microbial fermentation of a gaseous substrate comprising CO. The methods include converting CO to one or more products including alcohols and/or acids and optionally capturing CO2 to improve overall carbon capture. In certain aspects, the disclosure relates to processes for producing alcohols, particularly ethanol, from industrial waste streams, particularly steel mill off-gas.
    Type: Grant
    Filed: July 28, 2013
    Date of Patent: September 8, 2015
    Assignee: LANZATECH NEW ZEALAND LIMITED
    Inventors: Sean Dennis Simpson, Christophe Collet, Michael Cockrem, Simon David Oakley, Michael Koepke
  • Publication number: 20150210987
    Abstract: The invention provides a carboxydotrophic acetogenic bacterium comprising a disrupting mutation in a lactate biosynthesis pathway enzyme and a method of producing a product by culturing the bacterium in the presence of a substrate comprising carbon monoxide. Preferably, the lactate biosynthesis pathway enzyme is lactate dehydrogenase (LDH) or another enzyme that converts pyruvate to lactate, wherein the disrupting mutation reduces or eliminates the expression or activity of the enzyme such that the bacterium produces a reduced amount of lactate or no lactate.
    Type: Application
    Filed: January 29, 2015
    Publication date: July 30, 2015
    Inventors: Shilpa Nagaraju, Bakir Al-Sinawi, Sashini De Tissera, Michael Koepke
  • Publication number: 20150211022
    Abstract: The invention provides a genetic tool to insert, replace, delete, or otherwise manipulate a nucleic acid sequence in a microorganism to produce a recombinant microorganism. Notably, the invention makes use of homologous recombination, a type of genetic recombination in which nucleotide sequences are exchanged between two similar or identical molecules of DNA. Since the invention involves three homologous recombination events, it is referred to as a “triple cross” method.
    Type: Application
    Filed: January 28, 2015
    Publication date: July 30, 2015
    Inventors: David Jeffrey Fraser Walker, Michael Koepke
  • Publication number: 20150210977
    Abstract: The invention provides a bacterium with an increased tolerance to butyric acids, such as 2-hydroxybutyric acid (2-HIBA). In particular, the invention provides a bacterium that tolerates at least 2.5 g/L of butyric acid. The bacterium may be derived, for example, from genus Clostridium, Moorella, Oxobacter, Peptostreptococcus, Acetobacterium, Eubacterium, or Butyribacterium.
    Type: Application
    Filed: January 28, 2015
    Publication date: July 30, 2015
    Inventors: Bjorn Daniel Heijstra, Bakir Al-Sinawi, Liam Barry Smith, Rasmus Overgaard Jensen, Wayne Pierce Mitchell, Michael Koepke
  • Publication number: 20150191747
    Abstract: The invention provides a method for producing a terpene or a precursor thereof by microbial fermentation. Typically, the method involves culturing a recombinant bacterium in the presence of a gaseous substrate whereby the bacterium produces a terpene or a precursor thereof, such as mevalonic acid, isopentenyl pyrophosphate, dimethylallyl pyrophosphate, isoprene, geranyl pyrophosphate, farnesyl pyrophosphate, and/or farnesene. The bacterium may comprise one or more exogenous enzymes, such as enzymes in mevalonate, DXS, or terpene biosynthesis pathways.
    Type: Application
    Filed: March 13, 2015
    Publication date: July 9, 2015
    Inventors: Wendy Yiting Chen, FungMin Liew, Michael Koepke
  • Patent number: 9057071
    Abstract: The invention relates to methods for the production of chemical compounds, particularly but not exclusively ethanol, by microbial fermentation. Also described are genetically modified micro-organisms capable of using carbon monoxide to produce one or more products, particularly but not exclusively ethanol as a main product, and producing a reduced amount or substantially no 2,3-butanediol and/or a precursor thereof.
    Type: Grant
    Filed: January 31, 2013
    Date of Patent: June 16, 2015
    Assignee: LanzaTech New Zealand Limited
    Inventors: Michael Koepke, Shilpa Nagaraju, Wendy Yiting Chen
  • Publication number: 20150152445
    Abstract: The invention provides a recombinant, acetogenic, carboxydotrophic bacterium that lacks secondary alcohol dehydrogenase or comprises an inactivated secondary alcohol dehydrogenase. The inactivated secondary alcohol dehydrogenase may be encoded by a secondary alcohol dehydrogenase gene comprising an inactivating mutation that reduces the ability of the bacterium to convert acetone to isopropanol and to convert methyl ethyl ketone to 2-butanol. Since a bacterium that lacks secondary alcohol dehydrogenase or comprises an inactivated secondary alcohol dehydrogenase accumulates carbonyl-containing compounds, the invention also provides a method of producing carbonyl-containing compounds, such as acetone and methyl ethyl ketone.
    Type: Application
    Filed: December 3, 2014
    Publication date: June 4, 2015
    Inventors: Michael Koepke, Bakir Al-Sinawi, Rasmus Overgaard Jensen, Alexander Paul Mueller, Ryan Edward Hill
  • Publication number: 20150079650
    Abstract: The invention provides methods of increasing the production of fermentation products by increasing flux through a fermentation pathway by optimising enzymatic reactions. In particular, the invention relates to identifying enzymes and/or co-factors involved in metabolic bottlenecks in fermentation pathways, and fermenting a CO-comprising substrate with a recombinant carboxydotrophic Clostridia microorganism adapted to exhibit increased activity of the one or more of said enzymes, or increased availability of the one or more of said co-factors, when compared to a parental microorganism.
    Type: Application
    Filed: June 5, 2014
    Publication date: March 19, 2015
    Inventors: Michael Koepke, Alexander Paul Mueller
  • Publication number: 20150072395
    Abstract: The present provides selection markers, methods, nucleic acids, and vectors of use in the preparation of recombinant Clostridium spp.
    Type: Application
    Filed: September 12, 2014
    Publication date: March 12, 2015
    Inventors: David Jeffrey Fraser Walker, Shilpa Nagaraju, Michael Koepke, Alexander Paul Mueller
  • Publication number: 20140273115
    Abstract: A method is provided for controlling a metabolic profile of an anaerobic microbial fermentation culture. In particular, a metabolic profile of a fermentation process is controlled by controlling the amount of dissolved CO2 provided to a culture. Further provided is a method of producing one or more products by microbial fermentation of a gaseous substrate through feeding tail gas CO2 from a reactor to a second reactor, or by recycling tail gas CO2 to the same reactor.
    Type: Application
    Filed: March 12, 2014
    Publication date: September 18, 2014
    Applicant: LanzaTech New Zealand Limited
    Inventors: Sean Dennis Simpson, Michael Koepke, Kathleen Frances Smart, Loan Phuong Tran, Paul Sechrist
  • Publication number: 20140212976
    Abstract: The invention provides a recombinant carboxydotrophic Clostridia microorganism with increased overall utilization of NADPH relative to a parent microorganism. Further, the invention provides a method of producing a recombinant carboxydotrophic Clostridia microorganism which exhibits increased NADPH utilization relative to a parental microorganism. In particular, the invention relates to increasing the overall utilization of NADPH in a recombinant carboxydotrophic Clostridia microorganism in order to increase the production of at least one fermentation product by the microorganism.
    Type: Application
    Filed: January 30, 2014
    Publication date: July 31, 2014
    Applicant: LanzaTech New Zealand Limited
    Inventors: Alexander Paul Mueller, Michael Koepke
  • Publication number: 20140206901
    Abstract: The invention relates to methods for the production of chemical compounds, particularly but not exclusively ethanol, by microbial fermentation. Also described are genetically modified micro-organisms capable of using carbon monoxide to produce one or more products, particularly but not exclusively ethanol as a main product, and producing a reduced amount or substantially no 2,3-butanediol and/or a precursor thereof.
    Type: Application
    Filed: January 31, 2013
    Publication date: July 24, 2014
    Inventors: Michael Koepke, Shilpa Nagaraju, Wendy Yiting Chen