Patents by Inventor Pierre F. Indermuhle

Pierre F. Indermuhle has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20240001325
    Abstract: Devices for the manufacturing of high-quality building blocks, such as oligonucleotides, are described herein. Nano-scale devices allow for selective control over reaction conditions. Further, methods and devices described herein allow for the rapid construction of large libraries of highly accurate nucleic acids.
    Type: Application
    Filed: June 30, 2023
    Publication date: January 4, 2024
    Inventors: Eugene P. MARSH, Pierre F. INDERMUHLE, Bill James PECK
  • Publication number: 20230331765
    Abstract: Methods and devices are provided herein for surfaces for de novo nucleic acid synthesis which provide for low error rates. In addition, methods and devices are provided herein for increased nucleic acid mass yield resulting from de novo nucleic acid synthesis.
    Type: Application
    Filed: May 17, 2023
    Publication date: October 19, 2023
    Inventors: Pierre F. INDERMUHLE, Eugene P. MARSH, Andres FERNANDEZ, William BANYAI, Bill J. PECK
  • Patent number: 11745159
    Abstract: Defined sequence RNA synthesis by 3??5? direction is now well established and currently in use for synthesis and development of vast variety of therapeutic grade RNA and Si RNA etc. A number of such synthetic RNA requires a modification or labeling of 3?-end of an oligonucleotide. The synthesis of 3?-end modified RNA requiring lipophilic, long chain ligands or chromophores, using 3??5? synthesis methodology is challenging, requires corresponding solid support and generally results in low coupling efficiency and lower purity of the final oligonucleotide in general because of large amount of truncated sequences containing desired hydrophobic modification. We have approached this problem by developing reverse RNA monomer phosphoramidites for RNA synthesis in 5??3?-direction. They lead to very clean oligonucleotide synthesis allowing for introduction of various modifications at the 3?-end.
    Type: Grant
    Filed: December 15, 2020
    Date of Patent: September 5, 2023
    Assignee: Twist Bioscience Corporation
    Inventors: Eugene P. Marsh, Pierre F. Indermuhle, Bill James Peck
  • Patent number: 11697668
    Abstract: Methods and devices are provided herein for surfaces for de novo nucleic acid synthesis which provide for low error rates. In addition, methods and devices are provided herein for increased nucleic acid mass yield resulting from de novo nucleic acid synthesis.
    Type: Grant
    Filed: April 21, 2020
    Date of Patent: July 11, 2023
    Inventors: Pierre F. Indermuhle, Eugene P. Marsh, Andres Fernandez, William Banyai, Bill J. Peck
  • Publication number: 20210129108
    Abstract: Devices for the manufacturing of high-quality building blocks, such as oligonucleotides, are described herein. Nano-scale devices allow for selective control over reaction conditions. Further, methods and devices described herein allow for the rapid construction of large libraries of highly accurate nucleic acids.
    Type: Application
    Filed: December 15, 2020
    Publication date: May 6, 2021
    Inventors: Eugene P. Marsh, Pierre F. Indermuhle, Bill James Peck
  • Patent number: 10894242
    Abstract: Devices for the manufacturing of high-quality building blocks, such as oligonucleotides, are described herein. Nano-scale devices allow for selective control over reaction conditions. Further, methods and devices described herein allow for the rapid construction of large libraries of highly accurate nucleic acids.
    Type: Grant
    Filed: October 19, 2018
    Date of Patent: January 19, 2021
    Assignee: TWIST BIOSCIENCE CORPORATION
    Inventors: Eugene P. Marsh, Pierre F. Indermuhle, Bill James Peck
  • Publication number: 20200299322
    Abstract: Methods and devices are provided herein for surfaces for de novo nucleic acid synthesis which provide for low error rates. In addition, methods and devices are provided herein for increased nucleic acid mass yield resulting from de novo nucleic acid synthesis.
    Type: Application
    Filed: April 21, 2020
    Publication date: September 24, 2020
    Inventors: Pierre F. Indermuhle, Eugene P. Marsh, Andres Fernandez, William Banyai, Bill J. Peck
  • Patent number: 10669304
    Abstract: Methods and devices are provided herein for surfaces for de novo nucleic acid synthesis which provide for low error rates. In addition, methods and devices are provided herein for increased nucleic acid mass yield resulting from de novo nucleic acid synthesis.
    Type: Grant
    Filed: February 3, 2016
    Date of Patent: June 2, 2020
    Assignee: TWIST BIOSCIENCE CORPORATION
    Inventors: Pierre F. Indermuhle, Eugene P. Marsh, Andres Fernandez, William Banyai, Bill J. Peck
  • Publication number: 20190118154
    Abstract: Devices for the manufacturing of high-quality building blocks, such as oligonucleotides, are described herein. Nano-scale devices allow for selective control over reaction conditions. Further, methods and devices described herein allow for the rapid construction of large libraries of highly accurate nucleic acids.
    Type: Application
    Filed: October 19, 2018
    Publication date: April 25, 2019
    Inventors: Eugene P. MARSH, Pierre F. INDERMUHLE, Bill James PECK
  • Publication number: 20160229884
    Abstract: Methods and devices are provided herein for surfaces for de novo nucleic acid synthesis which provide for low error rates. In addition, methods and devices are provided herein for increased nucleic acid mass yield resulting from de novo nucleic acid synthesis.
    Type: Application
    Filed: February 3, 2016
    Publication date: August 11, 2016
    Inventors: Pierre F. Indermuhle, Eugene P. Marsh, Andres Fernandez, William Banyai, Bill J. Peck
  • Patent number: 8765359
    Abstract: Methods of preparing organosilane-functionalized regions on a substrate surface and more specifically fabricating patterned functionalized substrates suitable to be optically read, the methods generally comprising employing a vapor deposition process of an organosilane gas onto a lithographically patterned silicon surface followed by removal of the patterning media in a bath of organic solvents and ultrasonic excitation. The inventive methods provide optimized surface density of functional species while avoiding deleterious effects that can occur when lithographically patterned substrates are exposed to various gaseous species during the functionalization process.
    Type: Grant
    Filed: June 5, 2012
    Date of Patent: July 1, 2014
    Assignee: Complete Genomics, Inc.
    Inventors: Andres Fernandez, Shaunak Roy, Jay Shafto, Norman L. Burns, Claudia Richter, Pierre F. Indermuhle
  • Patent number: 8765077
    Abstract: Multiplex binding assay assemblies are disclosed. The assemblies generally include at least one assay bar that includes a top side, a bottom side, and at least one well accessible from the top side of the assay bar. Each well includes a side surface, a bottom surface, an open top end, and at least one secondary container, with each secondary container including a capillary tube that (i) begins at a location within an interior volume of the well and (ii) ends at a location beneath the bottom surface of the assay bar. The assemblies further include a dispenser bar that is adapted to be positioned adjacent to the top side of the assay bar, which includes one or more reservoirs that are configured to provide one or more reagents to the at least one secondary container located in each well of the assay bar.
    Type: Grant
    Filed: August 2, 2011
    Date of Patent: July 1, 2014
    Inventor: Pierre F. Indermuhle
  • Patent number: 8697005
    Abstract: Multiplex binding assay assemblies are disclosed. The assemblies include at least one assay bar that has a top side, a bottom side, and at least one well accessible from the top side of the assay bar, with each well including a side surface, a bottom surface, an open top end. Each well also includes at least one secondary container, with each secondary container including a capillary tube that (i) begins at a location within an interior volume of the well and (ii) ends at a location beneath the bottom side of the assay bar. The assemblies further include a guiding track, which includes a set of two rails, with each rail having its own separate groove. Such grooves are configured to run parallel to each other with a distance between such grooves, with a first groove configured to receive a protruding element (or an end) of a first side of the assay bar, and a second groove configured to receive a protruding element (or an end) of a second side of the assay bar.
    Type: Grant
    Filed: August 2, 2011
    Date of Patent: April 15, 2014
    Inventor: Pierre F. Indermuhle
  • Publication number: 20130323652
    Abstract: Methods of preparing organosilane-functionalized regions on a substrate surface and more specifically fabricating patterned functionalized substrates suitable to be optically read, the methods generally comprising employing a vapor deposition process of an organosilane gas onto a lithographically patterned silicon surface followed by removal of the patterning media in a bath of organic solvents and ultrasonic excitation. The inventive methods provide optimized surface density of functional species while avoiding deleterious effects that can occur when lithographically patterned substrates are exposed to various gaseous species during the functionalization process.
    Type: Application
    Filed: June 5, 2012
    Publication date: December 5, 2013
    Applicant: Complete Genomics, Inc.
    Inventors: Andres Fernandez, Shaunak Roy, Jay Shafto, Norman L. Burns, Claudia Richter, Pierre F. Indermuhle
  • Publication number: 20130303408
    Abstract: Assay plate assemblies are disclosed. The assemblies include an assay plate that has a top side, a bottom side, and at least one well accessible from the top side of the plate. The well includes a side surface and a bottom surface, with at least one secondary container protruding through the bottom surface and into an interior volume of the well. The assemblies further include a dispenser plate that is adapted to be positioned adjacent to the top side of the assay plate. The dispenser is further configured to provide one or more reagents to one or more secondary containers of at least one well of the assay plate.
    Type: Application
    Filed: March 27, 2013
    Publication date: November 14, 2013
    Inventor: Pierre F. Indermuhle
  • Publication number: 20120028847
    Abstract: Multiplex binding assay assemblies are disclosed. The assemblies include at least one assay bar that has a top side, a bottom side, and at least one well accessible from the top side of the assay bar, with each well including a side surface, a bottom surface, an open top end. Each well also includes at least one secondary container, with each secondary container including a capillary tube that (i) begins at a location within an interior volume of the well and (ii) ends at a location beneath the bottom side of the assay bar. The assemblies further include a guiding track, which includes a set of two rails, with each rail having its own separate groove. Such grooves are configured to run parallel to each other with a distance between such grooves, with a first groove configured to receive a protruding element (or an end) of a first side of the assay bar, and a second groove configured to receive a protruding element (or an end) of a second side of the assay bar.
    Type: Application
    Filed: August 2, 2011
    Publication date: February 2, 2012
    Inventor: Pierre F. Indermuhle
  • Publication number: 20120028844
    Abstract: Multiplex binding assay assemblies are disclosed. The assemblies generally include at least one assay bar that includes a top side, a bottom side, and at least one well accessible from the top side of the assay bar. Each well includes a side surface, a bottom surface, an open top end, and at least one secondary container, with each secondary container including a capillary tube that (i) begins at a location within an interior volume of the well and (ii) ends at a location beneath the bottom surface of the assay bar. The assemblies further include a dispenser bar that is adapted to be positioned adjacent to the top side of the assay bar, which includes one or more reservoirs that are configured to provide one or more reagents to the at least one secondary container located in each well of the assay bar.
    Type: Application
    Filed: August 2, 2011
    Publication date: February 2, 2012
    Inventor: Pierre F. Indermuhle
  • Publication number: 20110218124
    Abstract: Assay plate assemblies are disclosed. The assemblies include an assay plate that has a top side, a bottom side, and at least one well accessible from the top side of the plate. The well includes a side surface and a bottom surface, with at least one secondary container protruding through the bottom surface and into an interior volume of the well. The assemblies further include a dispenser plate that is adapted to be positioned adjacent to the top side of the assay plate. The dispenser is further configured to provide one or more reagents to one or more secondary containers of at least one well of the assay plate.
    Type: Application
    Filed: March 4, 2011
    Publication date: September 8, 2011
    Inventor: Pierre F. Indermuhle
  • Patent number: 7615190
    Abstract: A microdevice for supporting a flowing fluid is disclosed. In one embodiment, the microdevice includes a substrate and a pair of generally parallel, spaced wall members on the substrate. At least one of the wall members includes a pair of structures defining an opening.
    Type: Grant
    Filed: April 20, 2004
    Date of Patent: November 10, 2009
    Assignee: Zyomyx, Inc.
    Inventors: Pierre F. Indermuhle, Peter Wagner
  • Publication number: 20040197931
    Abstract: A microdevice for supporting a flowing fluid is disclosed. In one embodiment, the microdevice includes a substrate and a pair of generally parallel, spaced wall members on the substrate. At least one of the wall members includes a pair of structures defining an opening.
    Type: Application
    Filed: April 20, 2004
    Publication date: October 7, 2004
    Applicant: Zyomyx, Inc.
    Inventors: Pierre F. Indermuhle, Peter Wagner