Patents by Inventor Randall Smith

Randall Smith has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20250084477
    Abstract: An example primer set includes first and second nuclease resistant primers. The first nuclease resistant primer includes a first sequence; a first cleavage site attached at a 3? end of the first sequence; and a first nuclease resistant modification incorporated between the first sequence and the first cleavage site. The second nuclease resistant primer includes a second sequence that is different from the first sequence; a second nuclease resistant modification incorporated at a 3? end of the second sequence; and a second cleavage site attached between the second sequence and the second nuclease resistant modification. The second cleavage site is different from the first cleavage site.
    Type: Application
    Filed: November 1, 2022
    Publication date: March 13, 2025
    Inventors: Esteban Armijo, Jonathan Mark Boutell, Jeffrey Brodin, Eli M. Carrami, Maria Candelaria Rogert Bacigalupo, Randall Smith, Mathieu Lessard-Viger, Ludovic Vincent
  • Publication number: 20250044228
    Abstract: There is set forth herein a device comprising structure defining a detector surface configured for supporting biological or chemical substances, and a sensor array comprising light sensors and circuitry to transmit data signals using photons detected by the light sensors. The device can include one or more features for reducing fluorescence range noise in a detection band of the sensor array.
    Type: Application
    Filed: October 18, 2024
    Publication date: February 6, 2025
    Inventors: Tracy H. FUNG, Poorya SABOUNCHI, Bernard HIRSCHBEIN, Joseph PINTO, Tarun KHURANA, Randall SMITH, Wenyi FENG
  • Publication number: 20250010285
    Abstract: An example of a flow cell includes a substrate including a surface and a dendron architecture. The dendron architecture includes a functionalized focal point of attachment that is attached to the substrate surface and a plurality of peripheral functional groups that are orthogonal to the functionalized focal point of attachment. The flow cell further includes a primer set attached to the dendron architecture via the plurality of peripheral functional groups.
    Type: Application
    Filed: June 21, 2024
    Publication date: January 9, 2025
    Inventors: Wayne N. George, Iuliana Petruta Maria, Randall Smith, Andrew A. Brown
  • Publication number: 20240425632
    Abstract: Some examples herein provide a method that includes reacting an unsaturated cyclic dione with an indole or indazole to form a first adduct. One of a substrate and a functional group is coupled to the unsaturated cyclic dione, and the other of the substrate and the functional group is coupled to the indole or indazole. Forming the first adduct couples the functional group to the substrate. Some examples herein provide a composition that includes a substate, a functional group, and an adduct coupling the functional group to the substrate. The adduct may be a product of a reaction between an unsaturated cyclic dione and an indole or indazole.
    Type: Application
    Filed: July 3, 2024
    Publication date: December 26, 2024
    Applicants: ILLUMINA, INC., ILLUMINA CAMBRIDGE LIMITED
    Inventors: Randall Smith, Wayne George, Andrew Brown
  • Publication number: 20240400605
    Abstract: Embodiments of the present disclosure relate to methods of preparation of templates for polynucleotide sequencing. In particular, the disclosure relates to linearization of clustered polynucleotides in preparation for sequencing by cleavage of one or more first strands of double-stranded polynucleotides immobilized on a solid support by a transition metal complex, for example, a palladium complex or a nickel complex. Further disclosure relate to linearization of clustered polynucleotides by cleaving one or more second strands of double double-stranded polynucleotides immobilized on a solid support comprising azobenzene linker by Na2S2O4. Nucleotides and oligonucleotides comprising a 3? phosphate moiety blocking group, and methods of removing the same using a fluoride reagent are also disclosed.
    Type: Application
    Filed: August 15, 2024
    Publication date: December 5, 2024
    Inventors: Xiaolin Wu, Randall Smith, Peyton Shieh, John M. Beierle, Wayne N. George, Elliot John Lawrence, Jie Mao, Xiaohai Liu
  • Publication number: 20240390896
    Abstract: An interposer for a flow cell comprises a base layer having a first surface and a second surface opposite the first surface. The base layer comprises black polyethylene terephthalate (PET). A first adhesive layer is disposed on the first surface of the base layer. The first adhesive layer comprises methyl acrylic adhesive. A second adhesive layer is disposed on the second surface of the base layer. The second adhesive layer comprises methyl acrylic adhesive. A plurality of microfluidic channels extends through each of the base layer, the first adhesive layer, and the second adhesive layer.
    Type: Application
    Filed: July 31, 2024
    Publication date: November 28, 2024
    Applicant: ILLUMINA, Inc.
    Inventors: Maxwell Zimmerley, LiangLiang Qiang, M. Shane Bowen, Steven H. Modiano, Dajun Yuan, Randall Smith, Arthur J. Pitera, Hai Quang Tran, Gerald Kreindl
  • Patent number: 12123833
    Abstract: There is set forth herein a device comprising structure defining a detector surface configured for supporting biological or chemical substances, and a sensor array comprising light sensors and circuitry to transmit data signals using photons detected by the light sensors. The device can include one or more features for reducing fluorescence range noise in a detection band of the sensor array.
    Type: Grant
    Filed: November 17, 2023
    Date of Patent: October 22, 2024
    Assignee: ILLUMINA, INC.
    Inventors: Tracy H. Fung, Poorya Sabounchi, Bernard Hirschbein, Joseph Pinto, Tarun Khurana, Randall Smith, Wenyi Feng
  • Patent number: 12084474
    Abstract: Embodiments of the present disclosure relate to methods of preparation of templates for polynucleotide sequencing. In particular, the disclosure relates to linearization of clustered polynucleotides in preparation for sequencing by cleavage of one or more first strands of double-stranded polynucleotides immobilized on a solid support by a transition metal complex, for example, a palladium complex or a nickel complex. Further disclosure relate to linearization of clustered polynucleotides by cleaving one or more second strands of double double-stranded polynucleotides immobilized on a solid support comprising azobenzene linker by Na2S2O4. Nucleotides and oligonucleotides comprising a 3? phosphate moiety blocking group, and methods of removing the same using a fluoride reagent are also disclosed.
    Type: Grant
    Filed: May 14, 2019
    Date of Patent: September 10, 2024
    Assignee: Illumina, Inc.
    Inventors: Xiaolin Wu, Randall Smith, Peyton Shieh, John M. Beierle, Wayne N. George, Elliot John Lawrence, Jie Mao, Xiaohai Liu
  • Patent number: 12083514
    Abstract: An interposer for a flow cell comprises a base layer having a first surface and a second surface opposite the first surface. The base layer comprises black polyethylene terephthalate (PET). A first adhesive layer is disposed on the first surface of the base layer. The first adhesive layer comprises methyl acrylic adhesive. A second adhesive layer is disposed on the second surface of the base layer. The second adhesive layer comprises methyl acrylic adhesive. A plurality of microfluidic channels extends through each of the base layer, the first adhesive layer, and the second adhesive layer.
    Type: Grant
    Filed: April 22, 2022
    Date of Patent: September 10, 2024
    Assignee: ILLUMINA, Inc.
    Inventors: Maxwell Zimmerley, LiangLiang Qiang, M. Shane Bowen, Steven H. Modiano, Dajun Yuan, Randall Smith, Arthur J. Pitera, Hai Quang Tran, Gerald Kreindl
  • Publication number: 20240271191
    Abstract: An array includes a support including a plurality of discrete wells, a gel material positioned in each of the plurality of discrete wells, and a quality control tracer grafted to the gel material in each of the plurality of discrete wells. The quality control tracer comprises (a) a cleavable nucleotide sequence comprising a cleavage site and (b) a detectable label; and in some aspects, is a cleavable nucleotide sequence with a detectable label and a non-reactive nucleotide sequence or a primer nucleotide sequence.
    Type: Application
    Filed: March 20, 2024
    Publication date: August 15, 2024
    Inventors: Peyton Shieh, John M. Beierle, Michael S. Graige, Alexander Fuhrmann, Randall Smith, Wei Wei, Naiqian Zhan
  • Patent number: 12060448
    Abstract: In one example, an unsaturated cyclic dione is coupled to the substrate, and is reacted with an indole or indazole including a first functional group to form a first adduct coupling the first functional group to the substrate. In another example, an unsaturated cyclic dione is coupled to a substrate and reacted with a diene including a functional group to form an adduct coupling the functional group to the substrate. In another example, an indole or indazole is coupled to a substrate, and is reacted with an unsaturated cyclic dione including an oligonucleotide to form an adduct coupling the oligonucleotide to the substrate. In another example, a diene is coupled to a substrate, and is reacted with an unsaturated cyclic dione including an oligonucleotide to form an adduct coupling the oligonucleotide to the substrate.
    Type: Grant
    Filed: December 30, 2021
    Date of Patent: August 13, 2024
    Assignees: Illumina, Inc., Illumina Cambridge Limited
    Inventors: Randall Smith, Wayne George, Andrew Brown
  • Publication number: 20240141428
    Abstract: The present disclosure provides methods and systems for detecting multiple different nucleotides in a sample. In particular, the disclosure provides for detection of multiple different nucleotides in a sample utilizing fewer detection moieties than the number of nucleotides being detected and/or fewer imaging events than the number of nucleotides being detected.
    Type: Application
    Filed: October 18, 2023
    Publication date: May 2, 2024
    Inventors: Robert C. Kain, Xiaohai Liu, Wenyi Feng, Bernard Hirschbein, Helmy A. Eltoukhy, Xiaolin Wu, Geoffrey Paul Smith, Jonathan Mark Boutell, Thomas Joseph, Randall Smith, Min-Jui Richard Shen, Carolyn Tregidgo, Kay Klausing
  • Publication number: 20240132361
    Abstract: A carbon pitch or dry coke is produced by reacting a mixture of carbon dioxide and hydrogen in a reactor at a predetermined temperature and pressure with an iron catalyst being fed into the reactor, using a process that also involves production of methane from the reaction gases. The reaction product is cooled. The reaction product may be graphitized in a reaction vessel under reduced pressure, heating the vessel at a predetermined rate and injecting an inert gas flow. The vessel is heated to a temperature of between 1600° C. and 2800° C. and maintained at that temperature for hours. The vessel is cooled and the reaction products removed.
    Type: Application
    Filed: October 16, 2020
    Publication date: April 25, 2024
    Applicant: Seerstone LLC
    Inventor: Randall Smith
  • Patent number: 11952619
    Abstract: An array includes a support including a plurality of discrete wells, a gel material positioned in each of the plurality of discrete wells, and a quality control tracer grafted to the gel material in each of the plurality of discrete wells. The quality control tracer comprises (a) a cleavable nucleotide sequence comprising a cleavage site and (b) a detectable label; and in some aspects, is a cleavable nucleotide sequence with a detectable label and a non-reactive nucleotide sequence or a primer nucleotide sequence.
    Type: Grant
    Filed: May 6, 2020
    Date of Patent: April 9, 2024
    Assignee: Illumina, Inc.
    Inventors: Peyton Shieh, John M. Beierle, Michael S. Graige, Alexander Fuhrmann, Randall Smith, Wei Wei, Naiqian Zhan
  • Patent number: 11944922
    Abstract: The disclosure includes a water system that includes a feed water heat exchanger including a feed water heat exchanger above a water collection tank and a feed water heat exchanger/steam generator connected to the feed water heat exchanger. The feed water heat exchanger/steam generator includes a heat exchanger, coils, boiler burners, and emissions control. The water system includes a brine/waste water feed water heat exchanger positioned within brine/waste water tank enclosure, which includes a brine/waste water tank that is in fluidic connection with the feed water heat exchanger/steam generator. The water system includes a preheater in fluidic connection with the brine/waste water feed water heat exchanger, and a post-preheater heat exchanger enclosure including a post-preheater heat exchanger, post-preheater coils, post-preheater burner and post-preheater emissions control, the post-preheater heat exchanger in fluidic connection with the pre-heater.
    Type: Grant
    Filed: October 23, 2023
    Date of Patent: April 2, 2024
    Inventor: Randall Smith
  • Publication number: 20240094125
    Abstract: There is set forth herein a device comprising structure defining a detector surface configured for supporting biological or chemical substances, and a sensor array comprising light sensors and circuitry to transmit data signals using photons detected by the light sensors. The device can include one or more features for reducing fluorescence range noise in a detection band of the sensor array.
    Type: Application
    Filed: November 17, 2023
    Publication date: March 21, 2024
    Inventors: Tracy H. FUNG, Poorya SABOUNCHI, Bernard HIRSCHBEIN, Joseph PINTO, Tarun KHURANA, Randall SMITH, Wenyi FENG
  • Patent number: 11852586
    Abstract: There is set forth herein a device comprising structure defining a detector surface configured for supporting biological or chemical substances, and a sensor array comprising light sensors and circuitry to transmit data signals using photons detected by the light sensors. The device can include one or more features for reducing fluorescence range noise in a detection band of the sensor array.
    Type: Grant
    Filed: May 2, 2022
    Date of Patent: December 26, 2023
    Assignee: ILLUMINA, INC.
    Inventors: Tracy H. Fung, Poorya Sabounchi, Bernard Hirschbein, Joseph Pinto, Tarun Khurana, Randall Smith, Wenyi Feng
  • Patent number: 11827932
    Abstract: The present disclosure provides methods and systems for detecting multiple different nucleotides in a sample. In particular, the disclosure provides for detection of multiple different nucleotides in a sample utilizing fewer detection moieties than the number of nucleotides being detected and/or fewer imaging events than the number of nucleotides being detected.
    Type: Grant
    Filed: January 20, 2021
    Date of Patent: November 28, 2023
    Assignee: Illumina, Inc.
    Inventors: Robert C. Kain, Xiaohai Liu, Wenyi Feng, Bernard Hirschbein, Helmy A. Eltoukhy, Xiaolin Wu, Geoffrey Paul Smith, Jonathan Mark Boutell, Thomas Joseph, Randall Smith, Min-Jui Richard Shen, Carolyn Tregidgo, Kay Klausing
  • Patent number: 11530169
    Abstract: A plant nutrient composition comprises both fertilizer and microorganisms bound together so that the advantages of fertilizer and microorganisms for plant growth and soil health can be obtained by a one-step administration of the plant nutrient composition.
    Type: Grant
    Filed: June 1, 2022
    Date of Patent: December 20, 2022
    Assignee: Bio-Soil Enhancers, Inc.
    Inventors: Nolan Wayne Wade, Janiece McWilliams, Charles Grantham, H. Randall Smith, Louis H. Elwell, III
  • Publication number: 20220380844
    Abstract: In one example, a method of preparing a fluidic channel includes covalently coupling a first region of a substrate to a first region of a cover using first moieties covalently coupled to the first region of the substrate and second moieties covalently coupled to the first region of the cover. The covalent coupling between the first region of the substrate and the first region of the cover suspends a second region of the cover over a second region of the substrate to form a fluidic channel.
    Type: Application
    Filed: May 13, 2022
    Publication date: December 1, 2022
    Applicants: ILLUMINA, INC., ILLUMINA CAMBRIDGE LIMITED
    Inventors: Steven Modiano, Silke Musa, Lewis Kraft, Randall Smith, Sara Bakhshi, Brian Mather, Wayne George, Maxwell Zimmerley