Patents by Inventor Richard Mathies

Richard Mathies has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 9969970
    Abstract: The present invention provides conjugates of DNA and cells by linking the DNA to a native functional group on the cell surface. The cells can be without cell walls or can have cell walls. The modified cells can be linked to a substrate surface and used in assay or bioreactors.
    Type: Grant
    Filed: March 1, 2016
    Date of Patent: May 15, 2018
    Assignee: THE REGENTS OF THE UNIVERSITY OF CALIFORNIA
    Inventors: Shih-Chia Hsiao, Matthew B. Francis, Carolyn Bertozzi, Richard Mathies, Ravi Chandra, Erik Douglas, Amy Twite, Nicholas Toriello, Hiroaki Onoe
  • Publication number: 20160319238
    Abstract: The present invention provides conjugates of DNA and cells by linking the DNA to a native functional group on the cell surface. The cells can be without cell walls or can have cell walls. The modified cells can be linked to a substrate surface and used in assay or bioreactors.
    Type: Application
    Filed: March 1, 2016
    Publication date: November 3, 2016
    Inventors: Shih-Chia Hsiao, Matthew B. Francis, Carolyn Bertozzi, Richard Mathies, Ravi Chandra, Erik Douglas, Amy Twite, Nicholas Toriello, Hiroaki Onoe
  • Patent number: 9327036
    Abstract: The present invention provides conjugates of DNA and cells by linking the DNA to a native functional group on the cell surface. The cells can be without cell walls or can have cell walls. The modified cells can be linked to a substrate surface and used in assay or bioreactors.
    Type: Grant
    Filed: April 8, 2010
    Date of Patent: May 3, 2016
    Assignee: The Regents of the University of California
    Inventors: Shih-Chia Hsiao, Matthew B. Francis, Carolyn Bertozzi, Richard Mathies, Ravi Chandra, Erik Douglas, Amy Twite, Nicholas Toriello, Hiroaki Onoe
  • Publication number: 20120142088
    Abstract: The present invention provides conjugates of DNA and cells by linking the DNA to a native functional group on the cell surface. The cells can be without cell walls or can have cell walls. The modified cells can be linked to a substrate surface and used in assay or bioreactors.
    Type: Application
    Filed: April 8, 2010
    Publication date: June 7, 2012
    Applicant: The Regents of the University of California
    Inventors: Shih-Chia Hsiao, Matthew B. Francis, Carolyn Bertozzi, Richard Mathies, Ravi Chandra, Erik Douglas, Amy Twite, Nicholas Toriello, Hiroaki Onoe
  • Publication number: 20070237686
    Abstract: Membrane valves and latching valve structures for microfluidic devices are provided. A demultiplexer can be used to address the latching valve structures. The membrane valves and latching valve structures may be used to form pneumatic logic circuits, including processors.
    Type: Application
    Filed: March 21, 2007
    Publication date: October 11, 2007
    Inventors: Richard Mathies, William Grover, Erik Jensen
  • Publication number: 20060073484
    Abstract: Methods and apparatus for implementing microfluidic analysis devices are provided. A monolithic elastomer membrane associated with an integrated pneumatic manifold allows the placement and actuation of dense arrays of a variety of fluid control structures, such as structures for isolating, routing, merging, splitting, and storing volumes of fluid. The fluid control structures can be used to implement a pathogen detection and analysis system including integrated immunoaffinity capture and analysis, such as polymerase chain reaction (PCR) and capillary electrophoresis (CE) analysis. An analyte solution can be input into the device and pumped through a series of immunoaffinity capture matrices in microfabricated chambers having antibodies targeted to the various classes of microbiological organisms such as bacteria, viruses and bacterial spores. The immunoaffinity chambers can capture, purify, and concentrate the target for further analysis steps.
    Type: Application
    Filed: December 29, 2003
    Publication date: April 6, 2006
    Inventors: Richard Mathies, William Grover, Brian Paegel, Alison Skelley, Chung Liu, Eric Lagally, Robert Blazej
  • Patent number: 7015000
    Abstract: Fluorescent labels having at least one donor and at least one acceptor fluorophore bonded to a polymeric backbone in energy transfer relationship, as well as methods for their use, are provided. Of particular interest are the subject labels wherein the polymeric backbone is a nucleic acid and the donor fluorophore is bonded to the 5? terminus of said nucleic acid. Such labels find use as primers in applications involving nucleic acid chain extension, such as sequencing, PCR and the like.
    Type: Grant
    Filed: November 4, 2002
    Date of Patent: March 21, 2006
    Assignee: The Regents of the University of California
    Inventors: Richard Mathies, Alexander Glazer, Jingyue Ju
  • Publication number: 20060024743
    Abstract: Fluorescent labels having at least one donor and at least one acceptor fluorophore bonded to a polymeric backbone in energy transfer relationship, as well as methods for their use, are provided. Of particular interest are the subject labels wherein the polymeric backbone is a nucleic acid and the donor fluorophore is bonded to the 5? terminus of said nucleic acid. Such labels find use as primers in applications involving nucleic acid chain extension, such as sequencing, PCR and the like.
    Type: Application
    Filed: September 29, 2005
    Publication date: February 2, 2006
    Applicant: The Regents of the University of California
    Inventors: Richard Mathies, Alexander Glazer, Jingyue Ju
  • Publication number: 20050287572
    Abstract: Methods and apparatus for genome analysis are provided. A microfabricated structure including a microfluidic distribution channel is configured to distribute microreactor elements having copies of a sequencing template into a plurality of microfabricated thermal cycling chambers. A microreactor element may include a microcarrier element carrying the multiple copies of the sequencing template. The microcarrier element may comprise a microsphere. An autovalve at an exit port of a thermal cycling chamber, an optical scanner, or a timing arrangement may be used to ensure that only one microsphere will flow into one thermal cycling chamber wherein thermal cycling extension fragments are produced. The extension products are captured, purified, and concentrated in an integrated oligonucleotide gel capture chamber. A microfabricated component separation apparatus is used to analyze the purified extension fragments.
    Type: Application
    Filed: May 25, 2005
    Publication date: December 29, 2005
    Applicant: The Regents of the University of California
    Inventors: Richard Mathies, Robert Blazej, Chung Liu, Palani Kumaresan, Stephanie Yeung
  • Publication number: 20050230254
    Abstract: An electrochemical detector including side channels associated with a separation channel of a sample component separation apparatus is provided. The side channels of the detector, in one configuration, provide a sheath-flow for an analyte exiting the separation channel which directs the analyte to the electrically developed electrochemical detector.
    Type: Application
    Filed: April 14, 2005
    Publication date: October 20, 2005
    Applicant: The Regents of the University of California
    Inventors: Richard Mathies, Charles Emrich, Pankaj Singhal, Peter Ertl
  • Publication number: 20050019902
    Abstract: A miniature device has a body including one, two or more reaction chambers. The reaction chambers are constructed for one or more of the following: sample acquisition, preparation or analysis. Preferably, a sample preparation reaction includes nucleic acid extraction, amplification, nucleic acid fragmentation, labeling, extension or a transcription.
    Type: Application
    Filed: August 14, 2004
    Publication date: January 27, 2005
    Inventors: Richard Mathies, Eric Lagally, Peter Simpson
  • Publication number: 20030143594
    Abstract: Fluorescent labels having at least one donor and at least one acceptor fluorophore bonded to a polymeric backbone in energy transfer relationship, as well as methods for their use, are provided. Of particular interest are the subject labels wherein the polymeric backbone is a nucleic acid and the donor fluorophore is bonded to the 5′ terminus of said nucleic acid. Such labels find use as primers in applications involving nucleic acid chain extension, such as sequencing, PCR and the like.
    Type: Application
    Filed: November 4, 2002
    Publication date: July 31, 2003
    Applicant: The Regents of the University of California
    Inventors: Richard Mathies, Alexander Glazer, Jingyue Ju
  • Patent number: 6544744
    Abstract: Fluorescent labels having at least one donor and at least one acceptor fluorophore bonded to a polymeric backbone in energy transfer relationship, as well as methods for their use, are provided. Of particular interest are the subject labels wherein the polymeric backbone is a nucleic acid and the donor fluorophore is bonded to the 5′ terminus of said nucleic acid. Such labels find use as primers in applications involving nucleic acid chain extension, such as sequencing, PCR and the like.
    Type: Grant
    Filed: January 20, 2000
    Date of Patent: April 8, 2003
    Assignee: The Regents of the University of California
    Inventors: Richard Mathies, Alexander Glazer, Jingyue Ju
  • Patent number: 6177247
    Abstract: Compositions are provided comprising sets of fluorescent labeled oligonucleotides carrying pairs of donor and acceptor dye molecules, designed for efficient excitation of the donors at a single wavelength and emission from the acceptor in each of the pairs at different wavelengths. The different molecules having different donor-acceptor pairs can be modified to have substantially the same mobility and enhanced emission intensities under separation conditions, by varying the distance between the donor and acceptor in a given pair. Particularly, the fluorescent compositions find use as labels in analyzing double stranded and single stranded nucleic acid fragments using capillary electrophoresis.
    Type: Grant
    Filed: November 30, 1998
    Date of Patent: January 23, 2001
    Assignee: The Regents of the University of California
    Inventors: Richard Mathies, Alexander Glazer, Jingyue Ju
  • Patent number: 6028190
    Abstract: Fluorescent labels having at least one donor and at least one acceptor fluorophore bonded to a polymeric backbone in energy transfer relationship, as well as methods for their use, are provided. Of particular interest are the subject labels wherein the polymeric backbone is a nucleic acid and the donor fluorophore is bonded to the 5' terminus of said nucleic acid. Such labels find use as primers in applications involving nucleic acid chain extension, such as sequencing, PCR and the like.
    Type: Grant
    Filed: May 8, 1996
    Date of Patent: February 22, 2000
    Assignee: The Regents of the University of California
    Inventors: Richard Mathies, Alexander Glazer, Jingyue Ju
  • Patent number: 5869255
    Abstract: Compositions are provided comprising sets of fluorescent labeled oligonucleotides carrying pairs of donor and acceptor dye molecules, designed for efficient excitation of the donors at a single wavelength and emission from the acceptor in each of the pairs at different wavelengths. The different molecules having different donor-acceptor pairs can be modified to have substantially the same mobility and enhanced emission intensities under separation conditions, by varying the distance between the donor and acceptor in a given pair. Particularly, the fluorescent compositions find use as labels in analyzing double stranded and single stranded nucleic acid fragments using capillary electrophoresis.
    Type: Grant
    Filed: January 30, 1997
    Date of Patent: February 9, 1999
    Assignee: The Regents of the University of California
    Inventors: Richard Mathies, Alexander Glazer, Jingyue Ju
  • Patent number: 5707804
    Abstract: Compositions are provided for making oligonucleotides carrying pairs of donor and acceptor dye molecules, designed for efficient excitation of the donor at a single wavelength and emission from the acceptor in each of the pairs at different wavelengths. The different molecules having different donor-acceptor pairs can be modified to have substantially the same mobility under separation conditions, by varying the distance between the donor and acceptor in a given pair, and to have enhanced emission intensities from the acceptor. Particularly, the fluorescent compositions find use as labels in sequencing nucleic acids.
    Type: Grant
    Filed: March 27, 1995
    Date of Patent: January 13, 1998
    Assignee: The Regents of the University of California
    Inventors: Richard Mathies, Alexander Glazer, Jingyue Ju