Patents by Inventor Rotem Sorek

Rotem Sorek has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20240117020
    Abstract: In one embodiment, the present disclosure provides a combination of recombinant Ara h 1 and Ara h 2 variant polypeptides lacking at least one epitope recognized by anti-Ara h 1 antibodies and anti-Ara h 2 antibodies, respectively, thereby having reduced or abolished antibody binding to the peanut allergen. These peanut allergen variants may be used in methods of treating subjects allergic to peanuts and reducing the severity of their allergy.
    Type: Application
    Filed: November 29, 2023
    Publication date: April 11, 2024
    Applicant: Ukko Inc.
    Inventors: Yanay OFRAN, Moshe BEN DAVID, Orly MARCU GARBER, Si NAFTALY KIROS, Gil DIAMANT, Almog BREGMAN COHEN, Maayan KORMAN, Anna CHUPRIN, Zohar BIRON SOREK, Lior ROSENFELD SHLAMKOVICH, Etai ROTEM, Yair GAT
  • Publication number: 20240100105
    Abstract: Bacteriophage compositions and therapeutic uses thereof. In particular, compositions of lytic bacteriophages that are capable of lysing Propionibacterium acnes (P. acnes) bacterial strains associated with acne and biofilms, thereby treating or preventing acne and biofilms.
    Type: Application
    Filed: October 5, 2023
    Publication date: March 28, 2024
    Inventors: Eyal Weinstock, Hava Ben-David, Kobi Konstantin Sudakov, Ayelet Moses, Sarah Rachel Pollock, Rotem Sorek, Naomi Bluma Zak
  • Publication number: 20230072222
    Abstract: Disclosed herein are 3, 4-didehydro- and 3?-deoxy-3, 4-didehydro-compounds and pharmaceutical compositions thereof. Methods of use of these pharmaceutical compositions include those for treating diseases including virus-induced diseases, cancer, autoimmune diseases, immune disorders, and bacterial-associated diseases or infections, or combinations thereof. Examples of viral-induced diseases include viral infections by RNA or DNA viruses, for example SAR-CoV-2, EBV, BKV, JCV and HCMV.
    Type: Application
    Filed: January 25, 2022
    Publication date: March 9, 2023
    Applicant: YEDA RESEARCH AND DEVELOPMENT CO. LTD
    Inventors: Helena SHOMAR MONGES, Rotem SOREK, Lianet NODA GARCIA, Arthur MACHLENKIN, David SPERANDIO
  • Patent number: 11542508
    Abstract: Methods of expressing an expression product of interest are provided. Accordingly there is provided a method comprising introducing into a cell a polynucleotide comprising an AimR responsive element operatively linked to a nucleic acid sequence encoding the expression product of interest, and contacting said cell with an AimP peptide comprising an amino acid sequence of XXXXGG/A, wherein said AimP peptide is capable of binding said AimR polypeptide and dissociating said AimR polypeptide from said AimR responsive element. Also provided are articles of manufacture, isolated peptides, polynucleotides and nucleic acid constructs.
    Type: Grant
    Filed: November 28, 2017
    Date of Patent: January 3, 2023
    Assignee: Yeda Research and Development Co. Ltd.
    Inventors: Rotem Sorek, Gil Amitai, Erez Zohar
  • Publication number: 20220175807
    Abstract: Disclosed herein are prokaryotic homologs of viperin (pVips), and nucleotide and nucleoside analogs produced from pVips. These nucleotide and nucleoside analogs stop nucleotide chain synthesis and provide host cells with resistance to viral infections by targeting actively replicating viral genome. Further, these nucleotide and nucleoside analogs decrease DNA replication in malignant cells. Further disclosed are methods of identifying pVips, and nucleotide and nucleoside analogs produced thereof.
    Type: Application
    Filed: March 29, 2020
    Publication date: June 9, 2022
    Applicant: YEDA RESEARCH AND DEVELOPMENT CO. LTD.
    Inventors: Rotem SOREK, Auda BERNHEIM, Adl Jenny MILLMAN DAYAN
  • Publication number: 20220031776
    Abstract: Disclosed herein are bacteriophage compositions and therapeutic uses thereof. The disclosure also relates to bacteriophage that are capable of lysing Klebsiella bacterial strains, e.g., strains that are associated with inflammatory bowel disease, and thereby capable of modulating disease.
    Type: Application
    Filed: September 7, 2018
    Publication date: February 3, 2022
    Inventors: Kenya Honda, Koji Atarashi, Seiko Narushima, Eran Elinav, Rotem Sorek, Efrat Khabra, Hava Ben David, Eyal Weinstock, Sarah Pollock, Yulia Matiuhin, Naomi Zak
  • Publication number: 20210177920
    Abstract: Bacteriophage compositions and therapeutic uses thereof. In particular, compositions of lytic bacteriophages that are capable of lysing Propionibacterium acnes (P. acnes) bacterial strains associated with acne and biofilms, thereby treating or preventing acne and biofilms.
    Type: Application
    Filed: December 4, 2018
    Publication date: June 17, 2021
    Inventors: Eyal Weinstock, Hava Ben-David, Kobi Konstantin Sudakov, Ayelet Moses, Sarah Rachel Pollock, Rotem Sorek, Naomi Bluma Zak
  • Patent number: 10767156
    Abstract: Isolated polynucleotides encoding a BREX system are provided. Accordingly there is provided an isolated polynucleotide encoding a BREX system comprising a nucleic acid sequence encoding the BREX system comprising brxC/pglY, pglZ and at least one of pglX, pglXI, brxP, brxHI, brxHII, brxL, brxD, brxA, brxB, brxF, and brxE, with the proviso that said BREX system does not comprise pglW, and wherein said BREX system confers phage resistance to a bacteria recombinantly expressing same; Also provided is an isolated polynucleotide encoding a BREX system comprising a nucleic acid sequence encoding the BREX system comprising brxC/pglY, pglZ, pglX, pglW and at least one of brxD and brxHI, and wherein said BREX system confers phage resistance to a bacteria recombinantly expressing same. Also provided are compositions and methods for conferring phage resistance to bacteria or for conferring bacterial susceptibility to phages.
    Type: Grant
    Filed: October 14, 2014
    Date of Patent: September 8, 2020
    Assignee: YEDA RESEARCH AND DEVELOPMENT CO., LTD.
    Inventors: Rotem Sorek, Hila Sberro, Tamara Goldfarb
  • Publication number: 20200109395
    Abstract: Disclosed herein are microbial defense systems, which provide cells protection against phage infection and plasmid transformation. Methods of use of these defense systems for protecting cells from phage infection and plasmid transformation are also disclosed, wherein defense systems may be used individually or in combination. In addition, disclosed herein are methods of making cells that express these defense systems.
    Type: Application
    Filed: May 23, 2018
    Publication date: April 9, 2020
    Applicant: YEDA RESEARCH AND DEVELOPMENT CO. LTD.
    Inventors: Rotem SOREK, Gal OFiR, Gil AMITAI, Sarah MELAMED, Shany DORON, Azita LEAVITT
  • Publication number: 20190264213
    Abstract: Methods of expressing an expression product of interest are provided. Accordingly there is provided a method comprising introducing into a cell a polynucleotide comprising an AimR responsive element operatively linked to a nucleic acid sequence encoding the expression product of interest, and contacting said cell with an AimP peptide comprising an amino acid sequence of XXXXGG/A, wherein said AimP peptide is capable of binding said AimR polypeptide and dissociating said AimR polypeptide from said AimR responsive element. Also provided are articles of manufacture, isolated peptides, polynucleotides and nucleic acid constructs.
    Type: Application
    Filed: November 28, 2017
    Publication date: August 29, 2019
    Applicant: Yeda Research and Development Co. Ltd.
    Inventors: Rotem SOREK, Gil AMITAI, Erez ZOHAR
  • Patent number: 10227630
    Abstract: We describe a method for mining microbial genomes to discover antimicrobial genes and proteins having broad spectrum of activity. Also described are antimicrobial genes and their expression products from various microbial genomes that were found using this method. The products of such genes can be used as antimicrobial agents or as tools for molecular biology.
    Type: Grant
    Filed: August 1, 2013
    Date of Patent: March 12, 2019
    Assignee: The Regents of the University of California
    Inventors: Rotem Sorek, Edward M. Rubin
  • Publication number: 20180237774
    Abstract: A method of determining a transcription termination site in bacterial DNA is disclosed. Uses of sequences comprising transcription termination sites are also disclosed.
    Type: Application
    Filed: August 2, 2016
    Publication date: August 23, 2018
    Inventors: Rotem SOREK, Daniel DAR
  • Publication number: 20160287677
    Abstract: An isolated polypeptide is disclosed comprising an amino acid sequence selected from the group consisting of SEQ ID NOs: 2773-5544 and 11089-11094, wherein the polypeptide has antimicrobial activity. Uses thereof for treating microbial infections are also disclosed.
    Type: Application
    Filed: April 18, 2016
    Publication date: October 6, 2016
    Applicant: Yeda Research and Development Co. Ltd.
    Inventors: Rotem SOREK, Hila SBERRO, Azita LEAVITT
  • Publication number: 20160281053
    Abstract: Isolated polynucleotides encoding a BREX system are provided. Accordingly there is provided an isolated polynucleotide encoding a BREX system comprising a nucleic acid sequence encoding the BREX system comprising brxC/pglY, pglZ and at least one of pglX, pglXI, brxP, brxHI, brxHII, brxL, brxD, brxA, brxB, brxF, and brxE, with the proviso that said BREX system does not comprise pglW, and wherein said BREX system confers phage resistance to a bacteria recombinantly expressing same; Also provided is an isolated polynucleotide encoding a BREX system comprising a nucleic acid sequence encoding the BREX system comprising brxC/pglY, pglZ, pglX, pglW and at least one of brxD and brxHI, and wherein said BREX system confers phage resistance to a bacteria recombinantly expressing same. Also provided are compositions and methods for conferring phage resistance to bacteria or for conferring bacterial susceptibility to phages.
    Type: Application
    Filed: October 14, 2014
    Publication date: September 29, 2016
    Applicant: Yeda Research and Development Co., Ltd.
    Inventors: Rotem SOREK, Hila SBERRO, Tamara GOLDFARB
  • Patent number: 9353359
    Abstract: An isolated polypeptide is disclosed comprising an amino acid sequence selected from the group consisting of SEQ ID NOs: 2773-5544 and 11089-11094, wherein the polypeptide has antimicrobial activity. Uses thereof for treating microbial infections are also disclosed.
    Type: Grant
    Filed: December 26, 2013
    Date of Patent: May 31, 2016
    Assignee: Yeda Research and Development Co. Ltd.
    Inventors: Rotem Sorek, Hila Sberro, Azita Leavitt
  • Publication number: 20140178353
    Abstract: An isolated polypeptide is disclosed comprising an amino acid sequence selected from the group consisting of SEQ ID NOs: 2773-5544 and 11089-11094, wherein the polypeptide has antimicrobial activity. Uses thereof for treating microbial infections are also disclosed.
    Type: Application
    Filed: December 26, 2013
    Publication date: June 26, 2014
    Applicant: Yeda Research and Development Co., Ltd.
    Inventors: Rotem SOREK, Hila Sberro, Azita Leavitt
  • Publication number: 20140165226
    Abstract: We describe a method for mining microbial genomes to discover antimicrobial genes and proteins having broad spectrum of activity. Also described are antimicrobial genes and their expression products from various microbial genomes that were found using this method. The products of such genes can be used as antimicrobial agents or as tools for molecular biology.
    Type: Application
    Filed: August 1, 2013
    Publication date: June 12, 2014
    Applicant: The Regents of the University of California
    Inventors: Rotem Sorek, Edward M. Rubin
  • Publication number: 20140113376
    Abstract: An isolated polynucleotide is disclosed. The polynucleotide comprises a clustered, regularly interspaced short palindromic repeat (CRISPR) array nucleic acid sequence wherein at least one spacer of the CRISPR is sufficiently complementary to a portion of at least one prokaryotic gene so as to down-regulate expression of the prokaryotic gene and further comprises a nucleic acid sequence encoding at least one CRISPR associated (CAS) polypeptide of a repeat associated mysterious protein (RAMP) family. Uses of the polynucleotides and pharmaceutical compositions comprising the polynucleotides are also disclosed.
    Type: Application
    Filed: May 31, 2012
    Publication date: April 24, 2014
    Inventors: Rotem Sorek, Gil Amitai
  • Patent number: 8513489
    Abstract: We describe a method for mining microbial genomes to discover antimicrobial genes and proteins having broad spectrum of activity. Also described are antimicrobial genes and their expression products from various microbial genomes that were found using this method. The products of such genes can be used as antimicrobial agents or as tools for molecular biology.
    Type: Grant
    Filed: December 15, 2007
    Date of Patent: August 20, 2013
    Assignee: The Regents of the University of California
    Inventors: Rotem Sorek, Edward M. Rubin
  • Publication number: 20110091454
    Abstract: Polypeptide sequences and polynucleotide sequences are provided. Also provided are annotative information concerning such sequences and uses for these sequences.
    Type: Application
    Filed: February 8, 2010
    Publication date: April 21, 2011
    Inventors: Alex Diber, Sarah Pollock, Zurit Levine, Sergey Nemzer, Vladimir Grebinskiy, Brian Meloon, Andrew Olson, Avi Rosenberg, Ami Haviv, Shaul Zevin, Tomer Zekharia, Zipi Shaked, Moshe Olshansky, Ariel Farkash, Eyal Privman, Amit Novik, Naomi Keren, Gad S. Cojocaru, Pinchas Akiva, Yossi Cohen, Ronen Shemesh, Osnat Sella-Tavor, Liat Mintz, Hanqing Xie, Dvir Dahary, Erez Levanon, Shiri Freilich, Nili Beck, Wei-Yong Zhu, Alon Wasserman, Chen Chermesh, Idit Azar, Rotem Sorek, Jeanne Bernstein