Patents by Inventor Timothy Updyke
Timothy Updyke has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).
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Publication number: 20160061774Abstract: The present teachings provide methods, devices, systems, and materials for performing electrophoresis in an automated fashion. The electrophoresis system may simultaneously image gel during an electrophoresis run. In some embodiments, the electrophoresis system may analyze an imaged gel during or after electrophoresis. The device may comprise a gel processing system, a gel illumination system, an image capture system, and an image analysis all housed within a housing.Type: ApplicationFiled: August 3, 2015Publication date: March 3, 2016Inventors: Timothy UPDYKE, Paul PREDKI, Evangeline GONZALEZ, Randall LOWE, Tad SIMONS
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Publication number: 20160054327Abstract: The present invention provides methods and compositions for labeling, separating and analyzing proteins, particularly a specific protein of interest within a cell lysate or in a mixture of proteins. The proteins are labeled with an amine reactive or thiol reactive fluorescent dye, or an amine reactive fluorogenic reagent that becomes fluorescent upon reacting to amine groups located on the protein. Following the labeling step, the proteins within the mixture can be separated and analyzed. In a further embodiment, a tag binding fluorogenic reagent that can bind to a tag on a tagged protein is added to specifically label the protein of interest.Type: ApplicationFiled: April 16, 2015Publication date: February 25, 2016Inventors: Thomas Diller, Bethany Sutton, George Hanson, Timothy Updyke
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Publication number: 20160025676Abstract: Gels, such as polyacrylamide gels, are provided that include linear polyacrylamide in the stacking gel. Native gels that include linear polyacrylamide in the stacker can be used to separate biomolecular complexes, such as protein complexes. Gel cassettes in which the gap width between front and back plates does not vary by more than 5% at the upper edge of the cassette are also provided. The gel cassettes can be used for electrophoretic separation of proteins and protein complexes on native gels, such as native gels that include linear polyacrylamide in the stacker. The native gels can have multiple wells for electrophoresing at least one sample and/or at least one molecular weight standard.Type: ApplicationFiled: June 2, 2015Publication date: January 28, 2016Inventors: Thomas Beardslee, Timothy Updyke
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Patent number: 9097663Abstract: The present teachings provide methods, devices, systems, and materials for performing electrophoresis in an automated fashion. The electrophoresis system may simultaneously image gel during an electrophoresis run. In some embodiments, the electrophoresis system may analyze an imaged gel during or after electrophoresis. The device may comprise a gel processing system, a gel illumination system, an image capture system, and an image analysis all housed within a housing.Type: GrantFiled: December 17, 2012Date of Patent: August 4, 2015Assignee: LIFE TECHNOLOGIES CORPORATIONInventors: Timothy Updyke, Paul Predki, Evangeline Gonzalez, Randall Lowe, Tad Simons
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Publication number: 20150204815Abstract: Marker sets are provided for use on nondenaturing gels. The protein molecular weight markers are provided in liquid form, and are stable in liquid form for at least two months at 4 degrees C. and at least one year at ?20 degrees C. Methods of using the markers and kits containing stable native protein markers in liquid form for determining molecular mass of proteins using electrophoresis are also provided. Furthermore, methods for generating revenue by selling the liquid molecular weight markers, are provided.Type: ApplicationFiled: October 16, 2014Publication date: July 23, 2015Inventors: Thomas BEARDSLEE, Roumen BOGOEV, Cinnamon BOLZ, Regina ROONEY, Timothy UPDYKE
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Patent number: 9057694Abstract: Gels, such as polyacrylamide gels, are provided that include linear polyacrylamide in the stacking gel. Native gels that include linear polyacrylamide in the stacker can be used to separate biomolecular complexes, such as protein complexes. Gel cassettes in which the gap width between front and back plates does not vary by more than 5% at the upper edge of the cassette are also provided. The gel cassettes can be used for electrophoretic separation of proteins and protein complexes on native gels, such as native gels that include linear polyacrylamide in the stacker. The native gels can have multiple wells for electrophoresing at least one sample and/or at least one molecular weight standard.Type: GrantFiled: June 26, 2013Date of Patent: June 16, 2015Assignee: LIFE TECHNOLOGIES CORPORATIONInventors: Timothy Updyke, Thomas Beardslee
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Publication number: 20150044758Abstract: The present invention provides systems, devices, apparatuses and methods for automated bioprocessing. Examples of protocols and bioprocessing procedures suitable for the present invention include but are not limited to immunoprecipitation, chromatin immunoprecipitation, recombinant protein isolation, nucleic acid separation and isolation, protein labeling, separation and isolation, cell separation and isolation, food safety analysis and automatic bead based separation. In some embodiments, the invention provides automated systems, automated devices, automated cartridges and automated methods of western blot processing.Type: ApplicationFiled: August 19, 2014Publication date: February 12, 2015Inventors: Joseph Amshey, Daniel Bezdek, Espir Kahatt, Alexander Khorlin, Lance Parsons, Todd Peterson, Timothy Powers, Michael Thacker, Timothy Updyke, Kornelija Zgonc
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Patent number: 8845984Abstract: The present invention provides systems, devices, apparatuses and methods for automated bioprocessing. Examples of protocols and bioprocessing procedures suitable for the present invention include but are not limited to: immunoprecipitation, chromatin immunoprecipitation, recombinant protein isolation, nucleic acid separation and isolation, protein labeling, separation and isolation, cell separation and isolation, food safety analysis and automatic bead based separation. In some embodiments, the invention provides automated systems, automated devices, automated cartridges and automated methods of western blot processing.Type: GrantFiled: September 13, 2012Date of Patent: September 30, 2014Assignee: Life Technologies CorporationInventors: Joseph Amshey, Daniel Bezdek, Espir Kahatt, Alexander Khorlin, Lance Parsons, Todd Peterson, Timothy Powers, Michael Thacker, Timothy Updyke, Kornelija Zgonc
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Publication number: 20140231260Abstract: Provided herein is an apparatus for gel electrophoresis comprising a cassette and a comb having at least one wedge-shaped tooth.Type: ApplicationFiled: January 17, 2014Publication date: August 21, 2014Applicant: LIFE TECHNOLOGIES CORPORATIONInventors: Timothy Updyke, Jennifer Miller, Thomas Diller, Siddharth Kannan, Robert Bennett
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Publication number: 20140234979Abstract: The present invention provides methods and compositions for labeling, separating and analyzing proteins, particularly a specific protein of interest within a cell lysate or in a mixture of proteins. The proteins are labeled with an amine reactive or thiol reactive fluorescent dye, or an amine reactive fluorogenic reagent that becomes fluorescent upon reacting to amine groups located on the protein. Following the labeling step, the proteins within the mixture can be separated and analyzed. In a further embodiment, a tag binding fluorogenic reagent that can bind to a tag on a tagged protein is added to specifically label the protein of interest.Type: ApplicationFiled: November 13, 2013Publication date: August 21, 2014Applicant: LIFE TECHNOLOGIES CORPORATIONInventors: Thomas DILLER, Bethany Sutton, George Hanson, Timothy Updyke
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Patent number: 8778685Abstract: The present invention provides dual labeled protein standards useful for the simultaneous determination of the molecular weight of a subject protein as well as the relative mass (i.e., amount) of the subject protein present in an electrophoresis lane. The invention is also directed to methods suitable for the preparation of such dual labeled protein standards and to methods of using such dual labeled proteins to simultaneously determine the molecular weight and the relative amount of a subject protein. Further embodiments are directed to the use dual labeled protein standards to make a more accurate determination of the amount of a protein present in an electrophoresis lane. Yet further embodiments are directed to kits containing the presently described dual protein standards. Dual labeled protein standards made and used in accordance with the embodiments set forth herein may be used to simultaneously determine the molecular weight and the relative amount of a subject protein in real time.Type: GrantFiled: August 25, 2010Date of Patent: July 15, 2014Assignee: Life Technologies CorporationInventors: Thomas Diller, Timothy Updyke
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Publication number: 20140131205Abstract: The invention provides a dry electroblotting system for dry blotting gels, in which the system includes an electroblotting transfer stack that comprises an analysis gel and a blotting membrane, an anode, a body of anodic gel matrix juxtaposed with the anode between the anode and the transfer stack, a cathode, and a body of cathodic gel matrix juxtaposed with the cathode between the cathode and the transfer stack, in which the anodic gel matrix and the cathodic gel matrix each comprise an ion source for electrophoretic transfer. The dry electroblotting system does not use any liquid buffers that are added to the system just before electroblotting (such as when the transfer stack is being assembled). The anode, the cathode, or both can be separate from a power supply and provided as part of a disposable electrode assembly that also includes a body of gel matrix that includes ions for electrophoretic transfer.Type: ApplicationFiled: January 17, 2014Publication date: May 15, 2014Applicant: LIFE TECHNOLOGIES ISRAEL, LTD.Inventors: Ilana MARGALIT, Uri YOGEV, Itay SELA, Yuri KATZ, Adam SARTIEL, Timothy UPDYKE
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Publication number: 20140061050Abstract: Electrophoretic systems, formulations and methods are described which allow a user to perform electrophoresis experiments under conditions of high voltage and with reduced run time. An electrophoretic system, formulation or method may be run at 50% higher field strength than comparable systems already in use in the art. The presently described systems and formulations may be run at voltages above 225 V, above 250 V, above 275 V, above 300 V, above 325 V or above 350 V. The time required for performing an electrophoresis experiment may be reduced to less than about 30 minutes, less than about 20 minutes, less than about 15 minutes or less than about 12 minutes.Type: ApplicationFiled: July 25, 2013Publication date: March 6, 2014Applicant: LIFE TECHNOLOGIES CORPORATIONInventors: Timothy UPDYKE, Jennifer C. MILLER
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Publication number: 20140034500Abstract: Gels, such as polyacrylamide gels, are provided that include linear polyacrylamide in the stacking gel. Native gels that include linear polyacrylamide in the stacker can be used to separate biomolecular complexes, such as protein complexes. Gel cassettes in which the gap width between front and back plates does not vary by more than 5% at the upper edge of the cassette are also provided. The gel cassettes can be used for electrophoretic separation of proteins and protein complexes on native gels, such as native gels that include linear polyacrylamide in the stacker. The native gels can have multiple wells for electrophoresing at least one sample and/or at least one molecular weight standard.Type: ApplicationFiled: June 26, 2013Publication date: February 6, 2014Applicant: Life Technologies CorporationInventors: Timothy UPDYKE, Thomas BEARDSLEE
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Patent number: 8609423Abstract: The present invention provides methods and compositions for labeling, separating and analyzing proteins, particularly a specific protein of interest within a cell lysate or in a mixture of proteins. The proteins are labeled with an amine reactive or thiol reactive fluorescent dye, or an amine reactive fluorogenic reagent that becomes fluorescent upon reacting to amine groups located on the protein. Following the labeling step, the proteins within the mixture can be separated and analyzed. In a further embodiment, a tag binding fluorogenic reagent that can bind to a tag on a tagged protein is added to specifically label the protein of interest.Type: GrantFiled: May 16, 2008Date of Patent: December 17, 2013Assignee: Life Technologies CorporationInventors: Thomas Diller, George Hanson, Bethany Sutton, Timothy Updyke
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Patent number: 8404198Abstract: The present invention provides systems, devices, apparatuses and methods for automated bioprocessing. Examples of protocols and bioprocessing procedures suitable for the present invention include but are not limited to: immunoprecipitation, chromatin immunoprecipitation, recombinant protein isolation, nucleic acid separation and isolation, protein labeling, separation and isolation, cell separation and isolation, food safety analysis and automatic bead based separation. In some embodiments, the invention provides automated systems, automated devices, automated cartridges and automated methods of western blot processing.Type: GrantFiled: August 27, 2009Date of Patent: March 26, 2013Assignee: Life Technologies CorporationInventors: Joseph Amshey, Daniel Bezdek, Espir Kahatt, Alexander Khorlin, Lance Parsons, Todd Peterson, Timothy Powers, Michael Thacker, Timothy Updyke, Korneija Zgonc
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Publication number: 20130040376Abstract: The present invention provides systems, devices, apparatuses and methods for automated bioprocessing. Examples of protocols and bioprocessing procedures suitable for the present invention include but are not limited to: immunoprecipitation, chromatin immunoprecipitation, recombinant protein isolation, nucleic acid separation and isolation, protein labeling, separation and isolation, cell separation and isolation, food safety analysis and automatic bead based separation. In some embodiments, the invention provides automated systems, automated devices, automated cartridges and automated methods of western blot processing.Type: ApplicationFiled: September 13, 2012Publication date: February 14, 2013Applicant: LIFE TECHNOLOGIES COPORATIONInventors: Joseph AMSHEY, Daniel Bezdek, Espir Kahatt, Alexander Khorlin, Lance Parsons, Todd Peterson, Timothy Powers, Michael Tacher, Timothy Updyke, Kornelija Zgonc
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Publication number: 20130008790Abstract: The invention is drawn to composite agarose/acrylamide compositions and gels. In particular it relates to gels for the separation of molecules, particularly macromolecules such as proteins. The invention is also directed to the preparation of composite gels, the separation of molecules by techniques such as electrophoresis using such gels, and the transfer of proteins from such gels to a transfer membrane using an immunoblot transfer gel.Type: ApplicationFiled: June 6, 2012Publication date: January 10, 2013Applicant: LIFE TECHNOLOGIES (ISRAEL) LTD.Inventors: Timothy Updyke, Ilana Margalit, Michael Thacker
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Patent number: D695418Type: GrantFiled: August 16, 2012Date of Patent: December 10, 2013Assignee: Life Technologies CorporationInventors: Timothy Updyke, Paul Predki, Evangeline Gonzalez, Randall Lowe, Tad Simons
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Patent number: D719277Type: GrantFiled: June 1, 2012Date of Patent: December 9, 2014Assignee: Life Technologies CorporationInventors: Jennifer Miller, Paul Predki, Timothy Updyke, Itay Sela, Shimon Spector