Patents by Inventor Timothy Updyke

Timothy Updyke has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20120247958
    Abstract: The present teachings describe gel processing systems comprising at least an electrophoresis device and a computer system operably linked to perform electrophoresis. Systems of the disclosure may also comprise gel imaging systems, image capture systems, gel illumination systems and/or gel/image analysis systems. A computer system of the disclosure may comprise software components including graphical user interface (GUI) specifications and functional specifications. The disclosure also describes methods for gel processing performed on a gel processing system. Methods of the disclosure may comprise performing electrophoresis and in some embodiments, one or more additional steps, such as imaging, analysis, report generation and transfer of data to external sources. Methods and workflows of the disclosure may be user controlled and customized by using the GUI and other software and hardware functional components of the computer system.
    Type: Application
    Filed: April 2, 2012
    Publication date: October 4, 2012
    Applicant: LIFE TECHNOLOGIES CORPORATION
    Inventors: Timothy Updyke, Paul Predki, Evangeline Gonzalez, Randall Lowe, Tad Simons
  • Publication number: 20120234678
    Abstract: The present invention provides dual labeled protein standards useful for the simultaneous determination of the molecular weight of a subject protein as well as the relative mass (i.e., amount) of the subject protein present in an electrophoresis lane. The invention is also directed to methods suitable for the preparation of such dual labeled protein standards and to methods of using such dual labeled proteins to simultaneously determine the molecular weight and the relative amount of a subject protein. Further embodiments are directed to the use dual labeled protein standards to make a more accurate determination of the amount of a protein present in an electrophoresis lane. Yet further embodiments are directed to kits containing the presently described dual protein standards. Dual labeled protein standards made and used in accordance with the embodiments set forth herein may be used to simultaneously determine the molecular weight and the relative amount of a subject protein in real time.
    Type: Application
    Filed: September 3, 2009
    Publication date: September 20, 2012
    Inventors: Thomas Diller, Timothy Updyke
  • Publication number: 20110315930
    Abstract: Compositions and methods for mass spectroscopy are disclosed. The compositions and methods relate to the analysis of proteins and other biopolymers using mass spectroscopy, particularly matrix-assisted laser desorption time-of-flight mass spectrometry (MALDI-TOF MS).
    Type: Application
    Filed: December 16, 2010
    Publication date: December 29, 2011
    Applicant: LIFE TECHNOLOGIES CORPORATION
    Inventors: Robert Marshall Pope, John Leite, Mahbod Hajivandi, Charles George Shevlin, Timothy Updyke
  • Publication number: 20110073478
    Abstract: Electrophoretic systems, formulations and methods are described which allow a user to perform electrophoresis experiments under conditions of high voltage and with reduced run time. An electrophoretic system, formulation or method may be run at 50% higher field strength than comparable systems already in use in the art. The presently described systems and formulations may be run at voltages above 225 V, above 250 V, above 275 V, above 300 V, above 325 V or above 350 V. The time required for performing an electrophoresis experiment may be reduced to less than about 30 minutes, less than about 20 minutes, less than about 15 minutes or less than about 12 minutes.
    Type: Application
    Filed: August 24, 2010
    Publication date: March 31, 2011
    Applicant: LIFE TECHNOLOGIES CORPORATION
    Inventors: Timothy UPDYKE, Jennifer Miller
  • Publication number: 20110042217
    Abstract: Provided herein is an apparatus for gel electrophoresis comprising a cassette and a comb having at least one wedge-shaped tooth.
    Type: Application
    Filed: August 24, 2010
    Publication date: February 24, 2011
    Applicant: LIFE TECHNOLOGIES CORPORATION
    Inventors: Timothy UPDYKE, Jennifer MILLER, Thomas DILLER, Siddarth KANNAN, Robert BENNETT
  • Publication number: 20110042213
    Abstract: The present teachings provide methods, devices, systems, and materials for performing electrophoresis in an automated fashion. The electrophoresis system may simultaneously image gel during an electrophoresis run. In some embodiments, the electrophoresis system may analyze an imaged gel during or after electrophoresis. The device may comprise a gel processing system, a gel illumination system, an image capture system, and an image analysis all housed within a housing.
    Type: Application
    Filed: August 24, 2010
    Publication date: February 24, 2011
    Applicant: LIFE TECHNOLOGIES CORPORATION
    Inventors: Timothy UPDYKE, Paul PREDKI, Evangeline GONZALEZ, Randall LOWE, Tad SIMONS
  • Publication number: 20100187475
    Abstract: Compositions and methods for mass spectroscopy are disclosed. The compositions and methods relate to the analysis of proteins and other biopolymers using mass spectroscopy, particularly matrix-assisted laser desorption time-of-flight mass spectrometry (MALDI-TOF MS).
    Type: Application
    Filed: September 2, 2009
    Publication date: July 29, 2010
    Applicant: LIFE TECHNOLOGIES CORPORATION
    Inventors: Robert Marshall Pope, John Leite, Mahbod Hajivandi, Charles George Shevlin, Timothy Updyke
  • Publication number: 20100120129
    Abstract: The present invention provides systems, devices, apparatuses and methods for automated bioprocessing. Examples of protocols and bioprocessing procedures suitable for the present invention include but are not limited to: immunoprecipitation, chromatin immunoprecipitation, recombinant protein isolation, nucleic acid separation and isolation, protein labeling, separation and isolation, cell separation and isolation, food safety analysis and automatic bead based separation. In some embodiments, the invention provides automated systems, automated devices, automated cartridges and automated methods of western blot processing.
    Type: Application
    Filed: August 27, 2009
    Publication date: May 13, 2010
    Applicant: LIFE TECHNOLOGIES CORPORATION
    Inventors: Joseph Amshey, Daniel Bezdek, Espir Kahatt, Alexander Khorlin, Lance Parsons, Todd Peterson, Timothy Powers, Michael Thacker, Timothy Updyke, Kornelija Zgonc
  • Publication number: 20090035868
    Abstract: The present invention provides methods and compositions for labeling, separating and analyzing proteins, particularly a specific protein of interest within a cell lysate or in a mixture of proteins. The proteins are labeled with an amine reactive or thiol reactive fluorescent dye, or an amine reactive fluorogenic reagent that becomes fluorescent upon reacting to amine groups located on the protein. Following the labeling step, the proteins within the mixture can be separated and analyzed. In a further embodiment, a tag binding fluorogenic reagent that can bind to a tag on a tagged protein is added to specifically label the protein of interest.
    Type: Application
    Filed: May 16, 2008
    Publication date: February 5, 2009
    Applicant: INVITROGEN CORPORATION
    Inventors: Thomas Diller, George Hanson, Bethany Sutton, Timothy Updyke
  • Publication number: 20090026079
    Abstract: The invention provides a dry electroblotting system for dry blotting gels, in which the system includes an electroblotting transfer stack that comprises an analysis gel and a blotting membrane, an anode, a body of anodic gel matrix juxtaposed with the anode between the anode and the transfer stack, a cathode, and a body of cathodic gel matrix juxtaposed with the cathode between the cathode and the transfer stack, in which the anodic gel matrix and the cathodic gel matrix each comprise an ion source for electrophoretic transfer. The dry electroblotting system does not use any liquid buffers that are added to the system just before electroblotting (such as when the transfer stack is being assembled). The anode, the cathode, or both can be separate from a power supply and provided as part of a disposable electrode assembly that also includes a body of gel matrix that includes ions for electrophoretic transfer.
    Type: Application
    Filed: July 11, 2008
    Publication date: January 29, 2009
    Applicant: INVITROGEN CORPORATION
    Inventors: Ilana MARGALIT, Uri Yogev, Itay Sela, Yuri Katz, Adam Sartiel, Timothy Updyke
  • Publication number: 20070151853
    Abstract: Gels, such as polyacrylamide gels, are provided that include linear polyacrylamide in the stacking gel. Native gels that include linear polyacrylamide in the stacker can be used to separate biomolecular complexes, such as protein complexes. Gel cassettes in which the gap width between front and back plates does not vary by more than 5% at the upper edge of the cassette are also provided. The gel cassettes can be used for electrophoretic separation of proteins and protein complexes on native gels, such as native gels that include linear polyacrylamide in the stacker. The native gels can have multiple wells for electrophoresing at least one sample and/or at least one molecular weight standard.
    Type: Application
    Filed: December 21, 2006
    Publication date: July 5, 2007
    Applicant: INVITROGEN CORPORATION
    Inventors: Thomas Beardslee, Timothy Updyke
  • Publication number: 20070026479
    Abstract: Marker sets are provided for use on nondenaturing gels. The protein molecular weight markers are provided in liquid form, and are stable in liquid form for at least two months at 4 degrees C. and at least one year at ?20 degrees C. Methods of using the markers and kits containing stable native protein markers in liquid form for determining molecular mass of proteins using electrophoresis are also provided. Furthermore, methods for generating revenue by selling the liquid molecular weight markers, are provided.
    Type: Application
    Filed: June 27, 2006
    Publication date: February 1, 2007
    Applicant: Invitrogen Corporation
    Inventors: Thomas Beardslee, Cinnamon Bolz, Timothy Updyke, Regina Rooney
  • Publication number: 20060214104
    Abstract: Compositions and methods for mass spectroscopy are disclosed. The compositions and methods relate to the analysis of proteins and other biopolymers using mass spectroscopy, particularly matrix-assisted laser desorption time-of-flight mass spectrometry (MALDI-TOF MS).
    Type: Application
    Filed: October 26, 2005
    Publication date: September 28, 2006
    Applicant: Invitrogen Corporation
    Inventors: Robert Pope, John Leite, Mahbod Hajivandi, Charles Shevlin, Timothy Updyke
  • Publication number: 20050167268
    Abstract: A gel and buffer system for gel electrophoresis wherein separation occurs at neutral pH.
    Type: Application
    Filed: March 28, 2005
    Publication date: August 4, 2005
    Inventors: Timothy Updyke, Sheldon Engelhorn
  • Publication number: 20050167269
    Abstract: A gel and buffer system for gel electrophoresis wherein separation occurs at neutral pH.
    Type: Application
    Filed: March 28, 2005
    Publication date: August 4, 2005
    Inventors: Timothy Updyke, Sheldon Engelhorn
  • Publication number: 20050121325
    Abstract: The invention is drawn to composite agarose/acrylamide compositions and gels. In particular it relates to gels for the separation of molecules, particularly macromolecules such as proteins. The invention is also directed to the preparation of composite gels, the separation of molecules by techniques such as electrophoresis using such gels, and the transfer of proteins from such gels to a transfer membrane using an immunoblot transfer gel.
    Type: Application
    Filed: September 20, 2004
    Publication date: June 9, 2005
    Inventors: Timothy Updyke, Ilana Margalit, Michael Thacker
  • Publication number: 20050023141
    Abstract: A device for fluid phase electrophoresis, particularly solution phase isoelectric focusing, components thereof, and methods for use are presented.
    Type: Application
    Filed: May 9, 2003
    Publication date: February 3, 2005
    Inventors: Joseph Amshey, Timothy Updyke, Thomas Jackson, Michael Thacker
  • Publication number: 20050006239
    Abstract: A device for fluid phase electrophoresis, particularly solution phase isoelectric focusing, components thereof, and methods for use are presented.
    Type: Application
    Filed: May 10, 2004
    Publication date: January 13, 2005
    Inventors: Joseph Amshey, Timothy Updyke, Thomas Jackson, Michael Thacker
  • Patent number: D667134
    Type: Grant
    Filed: April 1, 2011
    Date of Patent: September 11, 2012
    Assignee: Life Technologies Corporation
    Inventors: Timothy Updyke, Paul Predki, Evangeline Gonzalez, Randall Lowe, Tad Simons