System, Method and Computer Simulation Environment For In Silico Trials in Pre-Diabetes and Type 2 Diabetes

An electronic system and method simulates a glucose-insulin metabolic system of a T2DM or prediabetic subject, wherein the system includes a subsystem that models dynamic glucose concentration in a T2DM or prediabetic subject, including an electronic module that models endogenous glucose production (EGP(t)), or meal glucose rate of appearance (Ra(t), or glucose utilization (U(t)), or renal excretion of glucose (B(t)), a subsystem that models dynamic insulin concentration in the T2DM or prediabetic subject, including an electronic module that models insulin secretion (S(t)), an electronic database containing a population of virtual T2DM or prediabetic subjects, each virtual subject having a plurality of metabolic parameters, and a processing module that calculates an effect of variation of at least one metabolic parameter value on the glucose insulin metabolic system of a virtual subject by inputting the plurality of metabolic parameter values.

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Description
BACKGROUND OF THE INVENTION

Over 20 million people in the United States alone have Type 2 Diabetes Mellitus (T2DM)—a complex derangement of the glucose-insulin metabolic system, which results in an increased insulin resistance and inappropriate insulin secretion. However, this pathological state does not appear suddenly, but usually subjects move from a healthy state to a diabetic state passing through an intermediate phase, called prediabetes: e.g. it is well known that individuals with impaired fasting glucose (IFG) have a 20-30% chance of developing diabetes over the following 5-10 years [1-3]. The risk is even greater if they have combined IFG and impaired glucose tolerance (IGT). Furthermore, IFG and IGT are associated with increased risk of cardiovascular events [4,5]. Therefore, in addition to studies on T2DM, the pathogenesis of IFG alone or in combination with IGT has engendered considerable interest. For instance, recently, it has been shown that postprandial hyperglycemia in individuals with early diabetes is due to lower rates of glucose disappearance rather than increased meal appearance or impaired suppression of endogenous glucose production (EGP), regardless of their fasting glucose. In contrast, insulin secretion, action, and the pattern of postprandial turnover are essentially normal in individuals with isolated IFG [6]. These results suggest that for treatment and prevention of T2 DM it is very important to provide drugs with a specific target, e.g. the ability to stimulate secretion instead of increasing insulin secretion, if this is the case.

To this purpose it is essential to investigate the mechanisms of glucose-insulin system derangement and drug pharmacodynamics, with properly designed experimental trials. However, it may not be possible, appropriate, convenient or desirable to perform such evaluation experiments on the diabetic subject in vivo, because some experiments cannot be done at all or are too difficult too dangerous, too expensive or not ethical. An in silico simulation environment could offer an alternative tool to test different treatment strategies, e.g. drug, exercise, diet, in prediabetes and diabetes in a cost-effective way. The power of simulation tools has been recently recognized by the FDA (Food and Drug Administration) which accepted a simulator of Type 1 Diabetes (T1DM) [7, 8] as an alternative to the animal studies for the validation of control algorithms before their use in human clinical trials [9]. No such simulator of T2DM has existed heretofore.

SUMMARY OF THE INVENTION

An aspect of an embodiment of the present invention extends the simulation of T1DM to T2DM. It is important to emphasize that due to the profound physiological differences between T1DM and T2DM, the mathematical model and the simulated “subjects” with T2DM are very different from the model and simulated “population” of T1DM.

Realistic computer simulation can provide invaluable information about the safety and the limitations of various treatments of T2DM, can guide and focus the emphasis of clinical studies, and can rule-out ineffective treatment scenarios in a cost-effective manner prior to human use. While simulators of diabetes exist, most are based on general population models. As a result, their capabilities are generally limited to prediction of population averages that would be observed during clinical trials.

Therefore, for the purpose of personalized treatment development, a different type of computer simulator is needed—a system that is capable of simulating the glucose-insulin dynamics of a particular person. In other words, a simulator of T2DM should be equipped with a “cohort” of in silico “subjects” that spans sufficiently well the observed inter-person variability of key metabolic parameters in the general population of people with T2DM. Because large-scale simulations would account better for inter-subject variability than small-size animal trials and would allow for more extensive testing of the limits and robustness of various treatments, the following paradigm has emerged: (i) in silico modeling could produce credible pre-clinical results that could be substituted for certain animal trials, and (ii) in silico testing yields these results in a fraction of the time required for animal trials.

Following this paradigm, this invention provides a comprehensive simulation environment, which has the potential to accelerate studies on T2DM and prediabetes. Two exemplary principal components of the simulation environment are: (1) A mathematical model of the human metabolic system which has been derived from a unique data set, including both T2DM and prediabetic patients who underwent a triple tracer meal protocol, and (2) A population of virtual subjects including N=100 subjects with pre-diabetes and N=100 subjects with T2DM. As previously demonstrated by our simulator of Type 1 Diabetes, a comprehensive simulation environment has the potential for performing rapid and cost-effective in silica experiments. T2DM specific experiments on virtual subjects could test the efficacy of drugs and other treatments, e.g. exercise or diet, for improving prediabetes and T2DM control.

In accordance with a first aspect of the invention, an electronic system is provided that simulates a glucose-insulin metabolic system of a T2DM or prediabetic subject, wherein the system includes a subsystem that models dynamic glucose concentration in a T2DM or prediabetic subject, including

    • an electronic module that models endogenous glucose production (EGP(t)),
    • an electronic module that models meal glucose rate of appearance (Ra(t)),
    • an electronic module that models glucose utilization (U(t)),
    • an electronic module that models renal excretion of glucose (E(t));

a subsystem that models dynamic insulin concentration in said T2DM or prediabetic subject, including

    • an electronic module that models insulin secretion (S(t));

an electronic database containing a population of virtual T2DM or prediabetic subjects, each virtual subject having a plurality of metabolic parameters with values within a range of values derived from in vivo T2DM or prediabetic subjects; and

a processing module that calculates an effect of variation of at least one metabolic parameter value on the glucose-insulin metabolic system of a virtual subject by inputting said plurality of metabolic parameter values including said at least one varied metabolic parameter value into said glucose concentration and insulin concentration subsystems.

In accordance with a second aspect of the invention, a computer-executable program product embodied as computer executable code in a computer-readable storage medium is provided, wherein said computer-executable program product simulates a glucose-insulin metabolic system of a T2DM or prediabetic subject, said computer-executable code including subsystem code that models dynamic glucose concentration in a T2DM or prediabetic subject, including

    • an electronic code module that models endogenous glucose production (EGP(t)),
    • an electronic code module that models meal glucose rate of appearance (Ra(t)),
    • an electronic code module that models glucose utilization (U(t)),
    • an electronic code module that models renal excretion of glucose (E(t));

subsystem code that models dynamic insulin concentration in said T2DM or prediabetic subject, including

    • an electronic code module that models insulin secretion (S(t));

an electronic database containing a population of virtual T2DM or prediabetic subjects, each virtual subject having a plurality of metabolic parameters with values within a range, of values derived from in vivo T2DM or prediabetic subjects; and

computer-executable code that calculates an effect of variation of at least one metabolic parameter value on the glucose-insulin metabolic system of a virtual subject by inputting said plurality of metabolic parameter values including said at least one varied metabolic parameter value into said glucose concentration and insulin concentration subsystems.

BRIEF DESCRIPTION OF THE DRAWINGS

FIG. 1A, FIG. 1B, FIG. 1C, FIG. 1D, FIG. 1E and FIG. 1F are graphs illustrating plasma glucose and insulin concentrations, meal rate of appearance and endogenous glucose production, and glucose utilization and insulin secretion rate;

FIG. 2 illustrates unit process models for endogenous glucose production, glucose rate of appearance, glucose utilization, and insulin secretion in accordance with the present invention;

FIGS. 3A and 3B are graphs illustrating observed versus simulated range of glucose concentration in prediabetes and type 2 diabetes, in accordance with the present invention;

FIG. 4A and FIG. 4B illustrates glucose and insulin concentrations in untreated prediabetic subjects versus prediabetic subjects treated with drugs x and y; and

FIG. 5 is a schematic block diagram for a system or related method of an embodiment of the present invention.

DETAILED DESCRIPTION OF THE INVENTION

Two key components of the simulator of the glucose-insulin metabolic system in prediabetes and T2DM in accordance with the present invention are:

(1) A physiological model of glucose-insulin metabolism in prediabetes and T2DM, and

(2) A population of virtual subjects with prediabetes (N-100) and T2DM (N-100).

Physiological Model of Glucose-Insulin Metabolism in Prediabetes and T2DM

Both model equations and the procedures which were used to identify model parameter distributions from prediabetes and T2DM meal data and to generate the virtual subject population are now described in accordance with an embodiment of the invention.

a. Model Equations

The model structure consists of a glucose subsystem and an insulin subsystem [7], each characterized by various unit processes, e.g. endogenous glucose production (EGP), meal glucose rate of appearance (Ra), glucose utilization (U), insulin secretion (S), and renal excretion (E).

Glucose Subsystem

The glucose subsystem model is defined by the following group of equations (1):

{ G . p ( t ) = EGP ( t ) + Ra ( t ) - U ii ( t ) - E ( t ) - k 1 · G p ( t ) + k 2 · G t t G p ( 0 ) = G pb G . t ( t ) = - U id ( t ) + k 1 · G p ( t ) - k 2 · G t ( t ) G t ( 0 ) = G tb G ( t ) = G p V g G ( 0 ) = G b ( 1 )

Where

Gp and Gt (mg/kg) are glucose masses in plasma and rapidly-equilibrating tissues, and in slowly-equilibrating tissues, respectively;
G (mg/dl) is plasma glucose concentration;
Suffix b denotes the basal state;
EGP is endogenous glucose production (mg/kg/min);
Ra is glucose rate of appearance in plasma (mg/kg/min);
E is renal excretion (mg/kg/min);
Uii and Uid are insulin-independent and dependent glucose utilizations, respectively (mg/kg/min);
VG is the distribution volume of glucose (dl/kg); and
k1 and k2 (min−1) are rate parameters.

At the basal steady state, endogenous glucose production, EGPb, equals glucose disappearance, i.e. the sum of glucose utilization and renal excretion (which is zero in normal subjects), Ub+Eb:


EGPb=UbEb   (2)

Insulin Subsystem

The insulin subsystem model is defined by the following group of equations (3):

{ I . l ( t ) = - ( m 1 + m 3 ( t ) ) · I l ( t ) + m 2 I p ( t ) + S ( t ) I l ( 0 ) = I lb I . p ( t ) = - ( m 2 + m 4 ) · I p ( t ) + m 1 · I l ( t ) I p ( 0 ) = I pb I ( t ) = I p V I I ( 0 ) = I b ( 3 )

where Ip and Il (pmol/kg) are insulin masses in plasma and in the liver, respectively;
I (pmol/l) is plasma insulin concentration;
S is insulin secretion (pmol/kg/min);
VI is the distribution volume of insulin (1/kg); and
m1-m4 (min−1) are rate parameters.

Degradation, D, occurs both in the liver and peripherally. Peripheral degradation has been assumed to be linear (m4). Hepatic extraction of insulin, HE, i.e. the insulin flux which leaves the liver irreversibly, divided by the total insulin flux leaving the liver, is assumed to be dependent from insulin secretion, S:


HE(t)=−m5·S(t)+m6 HE(0)=HEb   (4)

thus one has:

m 3 ( t ) = H E ( t ) · m 1 1 - H E ( t ) ( 5 )

At basal steady state one has:

m 6 = m 5 · S b + H E b ( 6 ) m 3 ( 0 ) = H E b · m 1 1 - H E b ( 7 ) S b = m 3 ( 0 ) · I l b + m 4 · I p b = D b ( 8 )

Moreover, given that the liver is responsible for 60% of insulin clearance in the steady state, one has:

m 2 = ( s b I p b - m 4 1 - H E b ) · 1 - H E b H E b ; m 4 = 2 5 · S b I p b · ( 1 - HE h ) ( 9 )

with Sb and Db basal secretion and degradation, respectively (HEb was fixed to 0.6).

Endogenous Glucose Production

Endogenous glucose production is defined by the following equation (10):


EGP(t)=kp1−kp2·Gp(t)−kp3·Id(t)−kp4·Ip0(t) EGP(0)=EGPb   (10)

where Ipo is the amount of insulin in the portal vein (pmol/kg);
Id (pmol/l) is a delayed insulin signal realized with a chain of two compartments:

{ I . 1 ( t ) = - k i · [ I 1 ( t ) - I ( t ) ] I 1 ( 0 ) = I b I . d ( t ) = - k i · [ I d ( t ) - I 1 ( t ) ] I d ( 0 ) = I b ( 11 )

kp1 (mg/kg/min) is the extrapolated EGP at zero glucose and insulin;
kp2 (min−1) is liver glucose effectiveness;
kp3 (mg/kg/min per pmol/l) is a parameter governing amplitude of insulin action on the liver;
kp4 (mg/kg/min/(pmol/kg)) is a parameter governing amplitude of portal insulin action on the liver; and
ki (min−1) is a rate parameter accounting for the delay between an insulin signal and insulin action.
EGP is obviously constrained to be non-negative.
At basal steady state one has:


kp1=EGPb+kp2·Gpb+kp3·Ib+kp4·Ipob   (12)

Glucose Rate of Appearance

The glucose rate of appearance (Ra) is defined by the following group of equations (13):

{ Q sto ( t ) = Q sto 1 ( t ) + Q sto 2 ( t ) Q sto ( 0 ) = 0 Q . sto 1 ( t ) = - k gri · Q sto 1 ( t ) + D · δ ( t ) Q sto 1 ( 0 ) = 0 Q . sto 2 ( t ) = - k empt ( Q sto ) · Q sto 2 ( t ) + k gri · Q sto 1 ( t ) Q sto 2 ( 0 ) = 0 Q . gut = - k abs · Q gut ( t ) + k empt ( Q sto ) · Q sto 2 ( t ) Q gut ( 0 ) = 0 Ra ( t ) = f · k abs · Q gut ( t ) BW Ra ( 0 ) = 0 ( 13 )

where Qsto (mg) is the amount of glucose in the stomach (solid phase, Qsto1, and liquid phase, Qsto2);
Qgut (mg) is the glucose mass in the intestine;
kgri (min−1) is the rate of grinding;
kempt(Qsto) (min−1) is a rate constant of gastric emptying which is a nonlinear function of Qsto;
kabs (min−1) is a rate constant of intestinal absorption;
ƒ is a fraction of intestinal absorption which actually appears in the plasma;
D (mg) is an amount of ingested glucose;
BW (kg) is body weight; and
Ra (mg/kg/min) is the appearance rate of glucose in the plasma.

Glucose Utilization

Glucose utilization is made up of two components: insulin-independent utilization and insulin-dependent utilization. Insulin-independent utilization takes place in the first compartment, is constant and represents glucose uptake by the brain and erythrocytes (Fcns):


Uii(t)=Fcns   (14)

Insulin-dependent utilization takes place in the remote compartment and depends nonlinearly (Michaelis Menten) from glucose in the tissues:

U id ( t ) = V ( X ( t ) ) · G t ( t ) K m 0 + G t ( t ) ( 15 )

where Vm(X(t)) is assumed to be linearly dependent from a remote insulin, X(t):


Vm(X(t))=Vm0+Vmx·X(t)   (16)

X (pmol/L) is insulin in the interstitial fluid described by:


{dot over (X)}(t)=−p2U·X(t)+p2U[I(t)−Ib]X(0)=0   (17)

where I is plasma insulin and p2U (min−1) is rate constant of insulin action on the peripheral glucose utilization.
Total glucose utilization, U, is thus:


U(t)=Uii(t)+Uid(t)   (18)

At basal steady state one has:

G tb = F c n s - E G P b + k 1 · G p b k 2 and : ( 19 ) V m 0 = ( E G P b - F c n s ) · ( K m 0 + G tb ) G t b ( 20 )

Insulin Secretion

Insulin secretion, S, is defined by the following equations (21)-(24):

S ( t ) = γ · I po ( t ) ( 21 ) I . po ( t ) = - γ · I po ( t ) + S po ( t ) I po ( 0 ) = I pob ( 22 ) S po ( t ) = { Y ( t ) + K · G . ( t ) + S b for G . > 0 Y ( t ) + S b for G . 0 and ( 23 ) Y . ( t ) = { - α · [ Y ( t ) - β · ( G ( t ) - h ) ] if β · ( G ( t ) - h ) - S b - α · Y ( t ) - α · S b if β · ( G ( t ) - h ) < - S b ; Y ( 0 ) = 0 ( 24 )

where γ (min−1) is the transfer rate constant between the portal vein and the liver;
K (pmol/kg per mg/dl) is the pancreatic responsivity to glucose rate of change;
a (min−4) is the delay between the glucose signal and insulin secretion;
β (pmol/kg/min per mg/dl) is the pancreatic responsivity to the glucose level; and
h (mg/dl) is the threshold level of glucose above which the β-cells initiate to produce new insulin (h was set to the basal glucose concentration Gb to guarantee system steady state in basal condition).

Renal Glucose Excretion

Renal glucose excretion, E, is defined by the following equation (25):

E ( t ) = { k e 1 · [ G p ( t ) - k e 2 ] if G p ( t ) > k e 2 0 if G p ( t ) k e 2 ( 25 )

where ke1 (min−1) is the glomerular filtration rate; and
ke2 (mg/kg) is the renal threshold of glucose.
b. Parameter Identification

The data base used to identify the model consisted of 35 subjects with either IFG or IGT, or both (prediabetes), and 23 T2DM patients who underwent a triple tracer meal protocol, thus allowing us to obtain in a virtually model-independent fashion the time course of all of the relevant glucose and insulin fluxes during a meal [6, 11]. Subject characteristics are reported in Table 1. Average plasma glucose and insulin concentration, Ra, EGP, U and SR in prediabetes and T2DM are shown in FIG. 1 together with the profile obtained in a matched healthy population [6]. In FIG. 1, plasma glucose and insulin concentrations are shown in the upper panels, meal glucose rate of appearance and endogenous glucose production are shown in the middle panels, and glucose utilization and insulin secretion rate are shown in the lower panels, in prediabetes, T2DM, and matched healthy subjects respectively.

TABLE 1 Anthropometric Characteristics of Prediabetes and Type 2 Diabetes Prediabetes Type 2 Diabetes Gender (F/M) 19/16 11/12 Age (years) 53.4 56.1 Weight (kg) 91.6 91.0 BMI (kg/m2) 30.4 31.8 LBM (kg) 51.7 52.2 %Fat (%) 37.8 38.6 Visceral Fat (cm2) 159.5 160.1

The system model described in section (a) has been identified in each subject by using a subsystem decomposition and forcing function strategy, as shown in FIG. 2. In FIG. 2, a unit process model for endogenous glucose production is shown in the top left panel; unit process model for glucose rate of appearance is shown in the top right panel; unit process model for glucose utilization is shown in the bottom left panel; an unit process model for insulin secretion is shown in the bottom right panel.

Entering arrows represent forcing function variables, and outgoing arrows are model output. For example, to estimate glucose utilization parameters (equations 14-20), we use as known inputs endogenous glucose production, EGP, glucose rate of appearance, Ra, and insulin concentration, I, and as the model output glucose utilization, U, and plasma glucose concentration, G.

Model parameters were thus identified in each subject and log-transformed. The average parameter vector and the covariance matrix have been thus calculated for both prediabetic and T2DM populations. Assuming that the parameter vector is a log-normally distributed random vector, the average of log-transformed parameters and the covariance matrix univocally define the joint parameter distribution. In order to prove that the generated populations reflect the observed variability, the range of simulated plasma glucose concentrations in both populations (prediabetes and T2DM) is shown in FIG. 3, superimposed with the observed (measured) range of variability.

A potential application of the simulator is the in silico study of the effect of a drug on glucose metabolism. FIG. 4 shows plasma glucose and insulin concentrations in untreated prediabetics versus a profile obtained with the administration of a drug x, which increases insulin sensitivity, and a drug y, which enhance beta-cell responsivity to glucose.

Population of Virtual “Subjects” with Prediabetes (N=100) and T2DM (N=100)

As noted above, the key to successful simulation is the availability of a comprehensive population of simulated “subjects” that encompasses the distribution of key metabolic parameters observed in T2DM in vivo. From the joint parameter distributions described in the previous section we have generated N=200 virtual subjects: N=100 with prediabetes and N=100 with T2DM.

Each virtual subject is uniquely identified by a set of 26 parameters:

kabs=rate constant of glucose absorption by the intestine

kmax=maximum rate constant of gastric emptying

kmin=minimum rate constant of gastric emptying

b=percentage of the dose for which kempt decreases at (kmax−kmin)/2

c=percentage of the dose for which kempt is back to (kmax−kmin)/2

ki=rate parameter accounting for delay between insulin signal and insulin action on the liver

kp2=liver glucose effectiveness

kp3=parameter governing amplitude of insulin action on the liver

kp4=parameter governing amplitude of portal insulin action on the liver

Vg=distribution volume of glucose

Vmx=parameter governing amplitude of insulin action on glucose utilization

km0=parameter governing glucose control on glucose utilization

K2=rate parameter accounting for glucose transit from tissue to plasma

K1=rate parameter accounting for glucose transit from plasma to tissue

P2U=rate parameter accounting for delay between insulin signal and insulin action on glucose utilization

Vi=distribution volume of insulin

K=beta-cell responsivity to glucose rate of change

β=beta-cell responsivity to glucose level

α=rate parameter accounting for delay between glucose signal and insulin secretion

m1=rate parameter of insulin kinetics

m5=coefficient linking insulin hepatic extraction to insulin secretion rate

Gb=basal plasma glucose concentration

EGPb=basal endogenous glucose production

BW=body weight

Ib=basal plasma insulin concentration

SRb=basal insulin secretion rate

Provided below in Tables 2 and 3, are sample lists of model parameters for 10 pre-diabetes virtual subjects and 10 T2DM virtual subjects.

TABLE 2 Model Parameters in 10 Prediabetic Subjects parameter unit subj #1 subj #2 subj #3 subj #4 subj #5 subj #6 subj #7 subj #8 subj #9 subj #10 kabs min{circumflex over ( )}-1 0.0735 0.1099 0.1661 0.0729 0.0793 0.0356 0.1177 0.0297 0.0765 0.1105 kmax min{circumflex over ( )}-1 0.0251 0.0292 0.0338 0.019 0.0354 0.036 0.0279 0.0314 0.0416 0.0315 kmin min{circumflex over ( )}-1 0.0125 0.009 0.0081 0.0145 0.0085 0.0129 0.0139 0.0112 0.0073 0.0106 b dimensionless 0.8197 0.6448 0.578 0.5239 0.6299 0.5467 0.6803 0.5534 0.5219 0.7486 c dimensionless 0.0871 0.0783 0.0752 0.0514 0.0711 0.0194 0.061 0.0419 0.1386 0.0601 ki min{circumflex over ( )}-1 0.0149 0.0112 0.007 0.0081 0.0077 0.0144 0.0083 0.0091 0.01 0.0089 kp2 min{circumflex over ( )}-1 0.0023 0.0025 0.0032 0.0052 0.0107 0.0025 0.0048 0.0021 0.0024 0.0146 kp3 mg/kg/min/ 0.0038 0.0035 0.0042 0.0201 0.0086 0.0124 0.0035 0.0103 0.0025 0.0041 (pmol/1) kp4 mg/kg/min/ 0.0106 0.015 0.0298 0.0377 0.0218 0.0252 0.0144 0.0291 0.0119 0.0233 (pmol/kg) Vg dl/kg 0.7703 1.5072 1.1806 1.35 1.2329 1.1499 1.4451 1.1974 1.417 1.151 Vmx mg/kg/min 0.0762 0.0398 0.0219 0.1018 0.0224 0.1533 0.0103 0.0746 0.0111 0.0142 per pmol/L km0 mg/kg 278.3481 262.9952 232.3868 285.9935 265.9869 306.6452 186.6311 317.4536 183.8099 194.9743 K2 min{circumflex over ( )}-1 0.0987 0.0891 0.0641 0.1284 0.0512 0.0798 0.0506 0.0754 0.026 0.0396 K1 min{circumflex over ( )}-1 0.1313 0.0917 0.0907 0.1006 0.0798 0.1316 0.0814 0.1402 0.0689 0.0854 p2U min{circumflex over ( )}-1 0.084 0.0579 0.041 0.1024 0.0311 0.0383 0.0366 0.0688 0.0691 0.0303 Vi l/kg 0.0465 0.0456 0.0456 0.0499 0.0449 0.047 0.048 0.0468 0.0476 0.0468 K pmol/kg/(mg/dl) 2.7727 1.579 2.5114 1.2439 3.9261 2.2416 3.3872 1.2828 3.4512 4.1856 β pmol/kg/min/ 0.2467 0.1839 0.1027 0.1169 0.0827 0.2034 0.1765 0.0905 0.148 0.1157 (mg/dl) α min{circumflex over ( )}-1 0.0163 0.0179 0.105 0.0263 0.115 0.0154 0.0504 0.0362 0.0494 0.045 m1 min{circumflex over ( )}-1 0.0597 0.1086 0.1871 0.0805 0.2383 0.1657 0.1842 0.0845 0.2373 0.2718 m5 min*kg/pmol 0.0163 0.0114 0.0164 0.0237 0.0276 0.0173 0.0085 0.0285 0.0205 0.0166 Gb mg/dl 92.0683 110.7642 99.985 98.4865 88.3801 103.674 90.955 96.9737 87.9565 98.3493 EGPb mg/kg/min 1.1875 1.2351 1.3047 1.9595 1.1917 1.199 1.412 1.3213 1.1577 1.14 BW kg 74.0362 77.0909 94.1644 76.6412 123.539 83.1689 84.8108 89.3894 106.9975 91.6455 lb pmol/l 22.9192 39.453 34.552 21.7494 43.6105 19.9288 42.5819 27.45 50.242 38.5558 SRb pmol/kg/min 1.3529 1.6791 1.4999 1.687 1.1615 1.4634 1.1764 1.4149 1.736 1.1567

TABLE 3 Model Parameters in 10 Type 2 Diabetic Subjects parameter unit subj #1 subj #2 subj #3 subj #4 subj #5 subj #6 subj #7 subj #8 subj #9 subj #10 kabs min{circumflex over ( )}-1 0.0514 0.0276 0.0643 0.0768 0.0276 0.0499 0.04 0.0753 0.0188 0.1003 kmax min{circumflex over ( )}-1 0.0315 0.0594 0.0188 0.0266 0.0593 0.0522 0.0605 0.0149 0.059 0.0336 kmin min{circumflex over ( )}-1 0.0066 0.0041 0.007 0.0142 0.0041 0.0119 0.0047 0.0042 0.0057 0.0135 b dimensionless 0.8244 0.5521 0.8097 0.7339 0.5518 0.4931 0.6156 1.018 0.4749 0.7751 c dimensionless 0.1662 0.0778 0.2434 0.0434 0.0778 0.0231 0.1176 0.6368 0.0409 0.0233 ki min{circumflex over ( )}-1 0.0152 0.0059 0.016 0.0118 0.0059 0.0056 0.0072 0.0111 0.0059 0.003 kp2 min{circumflex over ( )}-1 0.0037 0.0007 0.0053 0.0023 0.0007 0.0008 0.0027 0.0033 0.0009 0.0006 kp3 mg/kg/min/ 0.0055 0.0161 0.0052 0.0076 0.0162 0.003 0.0054 0.0023 0.0066 0.0064 (pmol/l) kp4 mg/kg/min/ 0.0448 0.0925 0.0214 0.073 0.0925 0.0152 0.0656 0.0214 0.1546 0.1207 (pmol/kg) Vg dl/kg 0.7907 0.8542 0.5878 1.7279 0.8542 1.4555 0.9845 0.6865 0.7526 2.4251 Vmx mg/kg/min 0.0409 0.0363 0.0244 0.0591 0.0363 0.017 0.0689 0.0137 0.0274 0.054 per pmol/L km0 mg/kg 357.0175 719.292 372.048 432.325 719.293 158.8016 331.7172 271.744 598.0593 457.3901 K2 min{circumflex over ( )}-1 0.0272 0.0891 0.018 0.0504 0.0887 0.0476 0.0853 0.0335 0.0107 0.0376 K1 min{circumflex over ( )}-1 0.0814 0.0937 0.0906 0.0624 0.0933 0.0484 0.0758 0.071 0.0485 0.0194 p2U min{circumflex over ( )}-1 0.0207 0.0853 0.0164 0.1419 0.0853 0.065 0.0131 0.0137 0.4861 0.0471 Vi l/kg 0.04 0.0385 0.0404 0.0391 0.0385 0.0528 0.044 0.043 0.0401 0.0394 K pmol/kg/(mg/dl) 1.5045 0.3015 1.5882 0.7135 0.3012 1.918 1.3548 2.2587 0.3735 1.4973 β pmol/kg/min/ 0.0711 0.0122 0.0373 0.071 0.0122 0.1722 0.1482 0.0798 0.0425 0.1191 (mg/dl) α min{circumflex over ( )}-1 0.0127 0.0415 0.0392 0.0182 0.0415 0.0083 0.0082 0.0123 0.0087 0.0067 m1 min{circumflex over ( )}-1 0.3068 0.0957 0.1807 0.5012 0.0956 0.0391 0.3772 0.1075 0.1218 0.1871 m5 min*kg/pmol 0.0523 0.1129 0.0499 0.0439 0.1129 0.0169 0.0276 0.0354 0.0926 0.0237 Gb mg/dl 141.7659 265.4568 179.435 127.8186 265.4568 64.313 126.1426 178.2554 178.9323 114.0941 EGPb mg/kg/min 2.0356 2.5077 1.6258 2.1968 2.5077 0.8218 2.0573 1.3879 2.0212 2.0332 BW kg 88.9266 106.4649 128.5865 75.4929 106.4648 81.3829 81.3337 129.8287 87.0632 59.7271 lb pmol/l 27.6839 94.1748 78.8107 20.3449 94.1748 37.6358 32.3702 148.7886 29.1458 42.3448 SRb pmol/kg/min 2.4889 7.2006 3.453 1.896 7.2004 1.659 3.3775 3.4148 3.1313 3.6781

Table 4 includes the mean, SD, and the range of all model parameters defining the span of the simulated populations:

TABLE 4 Mean, Standard Deviation and the Range of Prediabetic and Type 2 Diabetic Populations Prediabetics Type 2 Diabetics parameter unit Mean SD range Mean SD range kabs min{circumflex over ( )}-1 0.0883 0.0491 0.0191 ÷ 0.3564 0.0809 0.0627 0.0154 ÷ 0.2927 kmax min{circumflex over ( )}-1 0.0325 0.0088 0.0174 ÷ 0.0734 0.0435 0.0273 0.0101 ÷ 0.1853 kmin min{circumflex over ( )}-1 0.0107 0.0035 0.0050 ÷ 0.0201 0.0077 0.0033 0.0021 ÷ 0.0190 b dimensionless 0.7011 0.1598 0.3538 ÷ 1.2667 0.7578 0.1849 0.4589 ÷ 1.3582 c dimensionless 0.0829 0.0457 0.0194 ÷ 0.2882 0.1288 0.1113 0.0215 ÷ 0.6368 ki min{circumflex over ( )}-1 0.0104 0.0044 0.0024 ÷ 0.0242 0.0086 0.0035 0.0030 ÷ 0.0187 kp2 min{circumflex over ( )}-1 0.0047 0.0029 0.0009 ÷ 0.0215 0.0025 0.0022 0.0004 ÷ 0.0101 kp3 mg/kg/min/(pmol/1) 0.0078 0.0061 0.0016 ÷ 0.036  0.0062 0.0030 0.0020 ÷ 0.0162 kp4 mg/kg/min/(pmol/kg) 0.0337 0.0247 0.0072 ÷ 0.112  0.0553 0.0354 0.0081 ÷ 0.1760 Vg dl/kg 1.3850 0.3900 0.7259 ÷ 2.6317 1.1908 0.5288 0.4002 ÷ 3.2804 Vmx mg/kg/min per pmol/L 0.0465 0.0471 0.0044 ÷ 0.3949 0.0496 0.0558 0.0031 ÷ 0.4820 km0 mg/kg 220.46 42.94 143.22 ÷ 326.27 388.56 154.61 142.99 ÷ 925.26 K2 min{circumflex over ( )}-1 0.0825 0.0368 0.0240 ÷ 0.1982 0.1021 0.2655 0.0035 ÷ 1.4187 K1 min{circumflex over ( )}-1 0.0895 0.0192 0.0498 ÷ 0.1543 0.0570 0.0256 0.0164 ÷ 0.1214 p2U min{circumflex over ( )}-1 0.0513 0.0176 0.0157 ÷ 0.1024 0.0543 0.0611 0.0032 ÷ 0.4861 Vi l/kg 0.0486 0.0028 0.0417 ÷ 0.0562 0.0425 0.0041 0.0337 ÷ 0.0539 K pmol/kg/(mg/dl) 2.6275 1.1470 0.7647 ÷ 6.6455 1.2288 0.4852 0.3011 ÷ 2.6059 β pmol/kg/min/(mg/dl) 0.1246 0.0451 0.0610 ÷ 0.3056 0.0763 0.0468 0.0122 ÷ 0.2719 α min{circumflex over ( )}-1 0.0535 0.0313 0.0151 ÷ 0.1425 0.0208 0.0123 0.0031 ÷ 0.0722 m1 min{circumflex over ( )}-1 0.1657 0.0708 0.0544 ÷ 0.4519 0.1885 0.1207 0.0391 ÷ 0.6578 m5 min*kg/pmol 0.0215 0.0096 0.0029 ÷ 0.0504 0.0446 0.0235 0.0074 ÷ 0.1129 Gb mg/dl 95.60 9.31  78.49 ÷ 117.21 143.82 38.71  64.31 ÷ 265.46 EGPb mg/kg/min 1.3350 0.2506 0.9019 ÷ 2.1415 1.8151 0.4213 0.8218 ÷ 3.2570 BW kg 92.0528 20.3911 53.1937 ÷ 150.256 91.3930 21.2427  54.6762 ÷ 192.8718 lb pmol/1 38.0648 20.4097  9.3908 ÷ 143.376 52.7363 33.7269  13.8310 ÷ 187.1251 SRb pmol/kg/min 1.4479 0.4901 0.5841 ÷ 3.3658 3.2732 1.5889 1.0706 ÷ 7.5345

FIG. 5 is a functional block diagram for a computer system 500 for implementation of an exemplary embodiment or portion of an embodiment of the present invention. For example, a method or system of an embodiment of the present invention may be implemented using hardware, software or a combination thereof and may be implemented in one or more computer systems or other processing systems, such as personal digit assistants (PDAs) equipped with adequate memory and processing capabilities. In an example embodiment, the invention was implemented in software running on a general purpose computer 50 as illustrated in FIG. 5. The computer system 500 may includes one or more processors, such as processor 504. The Processor 504 is connected to a communication infrastructure 506 (e.g., a communications bus, cross-over bar, or network). The computer system 500 may include a display interface 502 that forwards graphics, text, and/or other data from the communication infrastructure 506 (or from a frame buffer not shown) for display on the display unit 530. Display unit 530 may he digital and/or analog.

The computer system 500 may also include a main memory 508, preferably random access memory (RAM), and may also include a secondary memory 510. The secondary memory 510 may include, for example, a hard disk drive 512 and/or a removable storage drive 514, representing a floppy disk drive, a magnetic tape drive, an optical disk drive, a flash memory, etc. The removable storage drive 514 reads from and/or writes to a removable storage unit 518 in a well known manner. Removable storage unit 518, represents a floppy disk, magnetic tape, optical disk, etc. which is read by and written to by removable storage drive 514. As will be appreciated, the removable storage unit 518 includes a computer usable storage medium having stored therein computer software and/or data.

In alternative embodiments, secondary memory 510 may include other means for allowing computer programs or other instructions to be loaded into computer system 500. Such means may include, for example, a removable storage unit 522 and an interface 520. Examples of such removable storage units/interfaces include a program cartridge and cartridge interface (such as that found in video game devices), a removable memory chip (such as a ROM, PROM, EPROM or EEPROM) and associated socket, and other removable storage units 522 and interfaces 520 which allow software and data to be transferred from the removable storage unit 522 to computer system 500.

The computer system 500 may also include a communications interface 524. Communications interface 124 allows software and data to be transferred between computer system 500 and external devices. Examples of communications interface 524 may include a modem, a network interface (such as an Ethernet card), a communications port (e.g., serial or parallel, etc.), a PCMCIA slot and card, a modem, etc. Software and data transferred via communications interface 524 are in the form of signals 528 which may be electronic, electromagnetic, optical or other signals capable of being received by communications interface 524. Signals 528 are provided to communications interface 524 via a communications path (i.e., channel) 526. Channel 526 (or any other communication means or channel disclosed herein) carries signals 528 and may be implemented using wire or cable, fiber optics, blue tooth, a phone line, a cellular phone link, an RF link, an infrared link, wireless link or connection and other communications channels.

In this document, the terms “computer program medium” and “computer usable medium” are used to generally refer to media or medium such as various software, firmware, disks, drives, removable storage drive 514, a hard disk installed in hard disk drive 512, and signals 528. These computer program products (“computer program medium” and “computer usable medium”) are means for providing software to computer system 500. The computer program product may comprise a computer useable medium having computer program logic thereon. The invention includes such computer program products. The “computer program product” and “computer useable medium” may be any computer readable medium having computer logic thereon.

Computer programs (also called computer control logic or computer program logic) are may be stored in main memory 508 and/or secondary memory 510. Computer programs may also be received via communications interface 524. Such computer programs, when executed, enable computer system 500 to perform the features of the present invention as discussed herein. In particular, the computer programs, when executed, enable processor 504 to perform the functions of the present invention. Accordingly, such computer programs represent controllers of computer system 500.

In an embodiment where the invention is implemented using software, the software may be stored in a computer program product and loaded into computer system 500 using removable storage drive 514, hard drive 512 or communications interface 524. The control logic (software or computer program logic), when executed by the processor 504, causes the processor 504 to perform the functions of the invention as described herein.

In another embodiment, the invention is implemented primarily in hardware using, for example, hardware components such as application specific integrated circuits (ASICs). Implementation of the hardware state machine to perform the functions described herein will be apparent to persons skilled in the relevant art(s).

In yet another embodiment, the invention is implemented using a combination of both hardware and software.

In an example software embodiment of the invention, the methods described above may be implemented in SPSS control language or C++ programming language, but could be implemented in other various programs, computer simulation and computer-aided design, computer simulation environment, MATLAB, or any other software platform or program, windows interface or operating system (or other operating system) or other programs known or available to those skilled in the art.

PUBLICATIONS

The following patents, applications and publications as listed below and throughout this document are hereby incorporated by reference in their entirety herein.

The devices, systems, compositions, computer program products, and methods of various embodiments of the invention disclosed herein may utilize aspects disclosed in the following references, applications, publications and patents and which are hereby incorporated by reference herein in their entirety:

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Title: System Coordinator and Modular Architecture for Open-Loop and Closed-Loop Control of Diabetes, Filed May 28, 2010.

Claims

1. A computer-implemented method for simulating a glucose-insulin metabolic system of a T2DM or prediabetic subject, comprising:

modeling, by at least one processor dynamic glucose concentration in a T2DM or prediabetic subject, by modeling endogenous glucose production (EGP(t)) of a T2DM or prediabetic subject, modeling meal glucose rate of appearance (Ra(t)) of a T2DM or prediabetic subject, modeling glucose utilization (U(t)) of a T2DM or prediabetic subject, and modeling renal excretion of glucose (E(t)) of a T2DM or prediabetic subject;
modeling, by at least one processor, dynamic insulin concentration in said T2DM or prediabetic subject, by modeling insulin secretion (S(t)) of a T2DM or prediabetic subject;
providing an electronic database containing a population of virtual T2DM or prediabetic subjects representative of the T2DM and prediabetic population, each virtual subject having a plurality of metabolic parameters with values encompassing a distribution of parameters observed in vivo across the population of T2DM or prediabetic subjects; and
calculating, by at least one processor, an effect of variation of at least one metabolic parameter value on the glucose-insulin metabolic system of a virtual T2DM or prediabetic subject by inputting said plurality of metabolic parameter values of said T2DM or prediabetic subject into said glucose concentration and insulin concentration subsystems and varying at least one of said metabolic parameter values to determine its effect on the glucose-insulin metabolic system of said T2DM or prediabetic subject.
Patent History
Publication number: 20220230762
Type: Application
Filed: Feb 1, 2022
Publication Date: Jul 21, 2022
Inventors: Boris P. Kovatchev (Charlottesville, VA), Claudio Cobelli (Padova), Chiara Dalla Man (Venezia)
Application Number: 17/590,659
Classifications
International Classification: G16H 50/50 (20060101); G16H 50/70 (20060101); G06N 5/00 (20060101); G16H 10/60 (20060101); A61B 5/00 (20060101); G16H 50/20 (20060101);