Patents Assigned to Salk Institute for Biological Studies
  • Patent number: 8630966
    Abstract: An apparatus, article and method containing an artificial neural network that, after training, produces new trainable nodes such that input data representative of a first event and input data representative of a second event both activate a subset of the new trainable nodes. The artificial neural network can generate an output that is influenced by the input data of both events. In various embodiments, the new trainable nodes are sequentially produced and show decreasing trainability over time such that, at a particular point in time, newer produced nodes are more trainable than earlier produced nodes. The artificial neural network can be included in various embodiments of methods, apparatus and articles for use in predicting or profiling events.
    Type: Grant
    Filed: January 27, 2010
    Date of Patent: January 14, 2014
    Assignee: Salk Institute for Biological Studies
    Inventors: Fred H. Gage, James Bradley Aimone, Janet Wiles
  • Publication number: 20140011235
    Abstract: Provided herein are release factor 1 (RF1) deficient bacteria, methods of using the bacteria to reassign the UAG codon, and generate mutant polypeptides.
    Type: Application
    Filed: November 29, 2011
    Publication date: January 9, 2014
    Applicant: Salk Institute For Biological Studies
    Inventor: Lei Wang
  • Patent number: 8624081
    Abstract: The relationship between F-box proteins and proteins involved in the ethylene response in plants is described. In particular, F-box proteins may bind to proteins involved in the ethylene response and target them for degradation by the ubiquitin/proteasome pathway. The transcription factor EIN3 is a key transcription factor mediating ethylene-regulated gene expression and morphological responses. EIN3 is degraded through a ubiquitin/proteasome pathway mediated by F-box proteins EBF1 and EBF2. The link between F-box proteins and the ethylene response is a key step in modulating or regulating the response of a plant to ethylene. Described herein are transgenic plants having an altered sensitivity to ethylene, and methods for making transgenic plant having an altered sensitivity to ethylene by modulating the level of activity of F-box proteins. Methods of altering the ethylene response in a plant by modulating the activity or expression of an F-box protein are described.
    Type: Grant
    Filed: January 27, 2011
    Date of Patent: January 7, 2014
    Assignee: Salk Institute for Biological Studies
    Inventors: Hongwei Guo, Joseph R. Ecker
  • Publication number: 20130315886
    Abstract: A method of treating increased non-LTR retrotransposition in a cell. The method includes exposing a neural cell to a retrotransposition inhibitor in an amount sufficient to decrease the non-LTR retrotransposition in the neural cell or a progeny of the neural cell. In various embodiments, the non-LTR retrotransposition involves at least one L1 retrotransposon. Also provided is a method of assaying retrotransposition in neural cells. The method includes sorting synchronized neural cells of the same genetic background into single neural cells, and subjecting one or more of the sorted single neural cells to quantitative polymerase chain reaction amplification of at least one retrotransposon. In addition, a method of identifying an inhibitor of retrotransposition and a identifying a neural condition associated with non-LTR retrotransposition are provided.
    Type: Application
    Filed: August 4, 2010
    Publication date: November 28, 2013
    Applicant: Salk Institute for Biological Studies
    Inventors: Fred H. Gage, Nicole Coufal, Michael J. McConnell, Alysson Muotri, Maria C.N. Marchetto
  • Publication number: 20130309209
    Abstract: There are provided, inter alia, methods for forming (e.g. transgeneration of) hematopoietic stem cells from mesenchymal stem cells.
    Type: Application
    Filed: October 24, 2011
    Publication date: November 21, 2013
    Applicants: Center for Regenerative Medicine of Barcelona, The Salk Institute for Biological Studies
    Inventors: Juan Carlos Izpisua-Belmonte, Emmanuel Nivet, Ignacio Sancho-Martinez, Leo Kurian, Julian Andres Pulecio Rojas
  • Publication number: 20130251734
    Abstract: This disclosure concerns antimicrobial compositions and methods for immunoenhancement, for example methods of increasing production of a type I interferon (IFN) in response to pathogen infection, by administration of a TAM receptor inhibitor. In certain embodiments, the disclosure concerns methods of using a TAM receptor inhibitor to treat a viral or bacterial infection in a subject.
    Type: Application
    Filed: March 8, 2013
    Publication date: September 26, 2013
    Applicant: The Salk Institute for Biological Studies
    Inventors: Greg E. Lemke, John A.T. Young, Carla V. Rothlin, Suchita Bhattacharyya
  • Publication number: 20130243729
    Abstract: Anti-cancer adenoviruses, methods of use and methods of making the same are provided herein.
    Type: Application
    Filed: February 15, 2013
    Publication date: September 19, 2013
    Applicant: SALK INSTITUTE FOR BIOLOGICAL STUDIES
    Inventors: Clodagh O'Shea, Colin Powers
  • Publication number: 20130231267
    Abstract: Methods of assembling modified adenoviruses, libraries of adenoviral gene modules and compositions thereof are provided herein.
    Type: Application
    Filed: February 15, 2013
    Publication date: September 5, 2013
    Applicant: SALK INSTITUTE FOR BIOLOGICAL STUDIES
    Inventors: Clodagh O'Shea, Colin Powers
  • Patent number: 8466195
    Abstract: Disclosed herein, inter alia, are methods and compositions for treating a complication of diabetes or a vascular disease using a 5-desoxy-flavone and/or 5-desoxy-flavonol.
    Type: Grant
    Filed: March 15, 2010
    Date of Patent: June 18, 2013
    Assignee: Salk Institute for Biological Studies
    Inventors: Pamela A. Maher, David R. Schubert
  • Publication number: 20130149741
    Abstract: Methods and compositions for protein expression are provided. In particular, cells producing efficient and reliable amounts of functional Wnt protein are provided.
    Type: Application
    Filed: June 29, 2012
    Publication date: June 13, 2013
    Applicant: SALK INSTITUTE FOR BIOLOGICAL STUDIES
    Inventors: Jennifer L. Green, Geoffrey Wahl, Yao-Cheng Li
  • Patent number: 8462355
    Abstract: A scanning microscope includes an acousto-optic scanner that produces a scanned beam. A beam separator based on total internal reflection or angle tuning of a dielectric filter separates an unscanned portion of an excitation light flux from a scanned portion. The scanned beam is directed to a specimen, and optical radiation generated in response to the scanned beam is directed to a detector that produces a detected signal that can be used to determine an image. The scanned beam can be directed to the specimen without formation of any intermediate focusing.
    Type: Grant
    Filed: January 15, 2009
    Date of Patent: June 11, 2013
    Assignee: The Salk Institute for Biological Studies
    Inventors: Dejan Vucinic, Terrence J. Sejnowski
  • Publication number: 20130116171
    Abstract: The method provides methods and compositions for treating metabolic disorders such as impaired glucose tolerance, elevated blood glucose, insulin resistance, dyslipidaemia, obesity, and fatty liver.
    Type: Application
    Filed: April 18, 2011
    Publication date: May 9, 2013
    Applicant: Salk Institute for Biological Studies
    Inventors: Johan W. Jonker, Michael Downes, Ronald M. Evans, Jaemyoung Suh
  • Patent number: 8434871
    Abstract: Projection screens for projection of binocular stereoscopic images include a metallic projection surface that includes a plurality of depressions configured to produce left and right viewable light fluxes in response to received left and right modulated light fluxes. The metallic projection surface can be formed by beadblasting, and multiple panels can be secured together by welding or other process. Projection surfaces can also be formed by molding or otherwise forming a conductive surface on a dielectric or other substrate.
    Type: Grant
    Filed: January 7, 2009
    Date of Patent: May 7, 2013
    Assignee: The Salk Institute for Biological Studies
    Inventors: Thomas M. Bartol, Paul O. Dunn, Jr., Terrence J. Sejnowski, Dejan Vucinic
  • Patent number: 8415361
    Abstract: This disclosure concerns antimicrobial compositions and methods for immunoenhancement, for example methods of increasing production of a type I interferon (IFN) in response to pathogen infection, by administration of a TAM receptor inhibitor. In certain embodiments, the disclosure concerns methods of using a TAM receptor inhibitor to treat a viral or bacterial infection in a subject.
    Type: Grant
    Filed: November 7, 2008
    Date of Patent: April 9, 2013
    Assignee: The Salk Institute for Biological Studies
    Inventors: Greg E. Lemke, John A. T. Young, Carla V. Rothlin, Suchita Bhattacharyya
  • Publication number: 20130078660
    Abstract: Methods and compositions for detecting a protein modification in vitro and in vivo are disclosed. In certain embodiments, the protein modification detected is phosphorylation.
    Type: Application
    Filed: March 23, 2011
    Publication date: March 28, 2013
    Applicant: SALK INSTITUTE FOR BIOLOGICAL STUDIES
    Inventors: Lei Wang, Vanessa K. Lacey, Angela R. Parrish
  • Publication number: 20130078727
    Abstract: Provided herein are methods and compositions for efficient accumulation of structural information (e.g., three dimensional structural information) for amino acid sequences.
    Type: Application
    Filed: September 5, 2012
    Publication date: March 28, 2013
    Applicants: JOINT CENTER FOR BIOSCIENCES, THE SALK INSTITUTE FOR BIOLOGICAL STUDIES
    Inventors: Senyon Choe, Christian Klammt, Witek Kwiatkowski, Innokentiy Maslennikov
  • Patent number: 8404247
    Abstract: Antitoxin and vaccine compositions based on nodavirus VLPs are provided. Anthrax antitoxin and vaccine compositions are provided. Methods of treating toxins with VLP-based antitoxins are provided. Methods of raising an immune response with immunogen decorated VLPs are provided.
    Type: Grant
    Filed: June 23, 2011
    Date of Patent: March 26, 2013
    Assignees: The Salk Institute for Biological Studies, The Scripps Research Institute
    Inventors: John Young, Anette Schneemann, Marianne Manchester, Kelly Dryden, John M. Marlett, Darly Joseph Manayani, Godfrey Jonah Anderson Rainey, Vijay Reddy, Marc E. Siladi, Heather M. Scobie, Diane Thomas, Mark Yeager
  • Publication number: 20130065834
    Abstract: Methods of modulating proteasome activity, increasing life span and neurogenesis are provided herein.
    Type: Application
    Filed: July 25, 2012
    Publication date: March 14, 2013
    Applicant: SALK INSTITUTE FOR BIOLOGICAL STUDIES
    Inventors: David Vilchez, Andrew Dillin
  • Patent number: 8389207
    Abstract: Disclosed herein are methods for identifying agents capable of affecting the expression, posttranslational modification, and/or an activity of TRB3, for example, in adipose tissue and/or adipocytes. Such agents are useful, for example, to mobilize fat stores and as prospective obesity therapeutics.
    Type: Grant
    Filed: May 31, 2007
    Date of Patent: March 5, 2013
    Assignee: Salk Institute for Biological Studies
    Inventors: Marc Montminy, Jose E. Heredia, Ling Qi
  • Publication number: 20130045537
    Abstract: Compositions and methods relating to development of multiciliate cells are provided.
    Type: Application
    Filed: February 23, 2011
    Publication date: February 21, 2013
    Applicant: The Salk Institute for Biological Studies
    Inventors: Christopher Kintner, Jennifer Stubbs