Patents Assigned to Salk Institute for Biological Studies
  • Publication number: 20130040310
    Abstract: This disclosure relates to methods and compositions useful for the treatment of cancer and diseases and disorders associated with autophagy.
    Type: Application
    Filed: December 15, 2010
    Publication date: February 14, 2013
    Applicant: Salk Institute for Biological Studies
    Inventors: Reuben Shaw, Daniel F. Egan, Maria Mihavlova, David Shackelford
  • Patent number: 8372801
    Abstract: A class of integral membrane proteins, referred to as Mistic polypeptides, their variants, fusion proteins including a Mistic polypeptide domain, and nucleic acid molecules encoding Mistic polypeptides and Mistic fusion proteins are disclosed herein. Also described are methods of using Mistic polypeptides and Mistic fusion proteins to produce and/or isolate recombinant proteins (including without limitation classes of eukaryotic proteins that have previously been intractable to recombinant bacterial expression, such as, eukaryotic integral membrane proteins).
    Type: Grant
    Filed: August 13, 2009
    Date of Patent: February 12, 2013
    Assignee: The Salk Institute for Biological Studies
    Inventors: Tarmo Roosild, Jason Greenwald, Senyon Choe
  • Patent number: 8372819
    Abstract: Provided herein are methods and compositions for modulating apoptosis by targeting SKIP (Ski-interacting protein) activity. Methods of increasing DNA damage-induced cell death in cancer cells, and reducing DNA damage-induced cell death in normal cells are provided.
    Type: Grant
    Filed: April 1, 2011
    Date of Patent: February 12, 2013
    Assignee: Salk Institute for Biological Studies
    Inventors: Katherine Jones, Lirong Zhang, Vanessa Bres, Yupeng Chen
  • Publication number: 20130004985
    Abstract: Provided herein are methods and compositions useful in treating neurological disorders.
    Type: Application
    Filed: December 23, 2010
    Publication date: January 3, 2013
    Applicant: THE SALK INSTITUTE FOR BIOLOGICAL STUDIES
    Inventors: Maria C.N. Marchetto, Fred H. Gage, Alysson R. Muotri
  • Publication number: 20130007910
    Abstract: Provided herein is the crystal structure for the brassinosteroid receptor BRI1, as well as strategies for modulating its activity.
    Type: Application
    Filed: May 16, 2012
    Publication date: January 3, 2013
    Applicant: Salk Institute for Biological Studies (027731)
    Inventors: Michael Hothorn, Joanne Chory
  • Publication number: 20130004966
    Abstract: Provided herein are seven high resolution crystal structures showing the cytokinin receptor AHK4 complexed with various naturally occurring and synthetic ligands. Further provided are strategies for modulating cytokinin receptor activity.
    Type: Application
    Filed: May 18, 2012
    Publication date: January 3, 2013
    Applicant: Salk Institute for Biological Studies (027731)
    Inventors: Michael Hothorn, Tsegaye Dabi, Joanne Chory
  • Patent number: 8334095
    Abstract: Disclosed herein are methods of expressing a heterologous nucleic acid sequence, such as a sequence encoding a detectable protein, in a primary neuron (or plurality of primary neurons) and other neurons that are monosynaptically connected to the primary neuron (or plurality of primary neurons). Such methods involve viruses (such as, rabies viruses) defective for transsynaptic transport (TST-defective virus) and in situ complementation of the defect in a manner that permits only monosynaptic transport of the TST-defective virus. The TST-defective virus and, therefore, any heterologous nucleic acid sequence it carries in its genome, are not transmitted to neurons that are not monosynaptically connected to the primary neuron (or plurality of primary neurons). Also disclosed are methods of targeting a TST-defective virus to a genetically defined primary neuron (or plurality of primary neurons).
    Type: Grant
    Filed: July 8, 2010
    Date of Patent: December 18, 2012
    Assignee: Salk Institute for Biological Studies
    Inventors: Ian R. Wickersham, John A. T. Young, Edward M. Callaway
  • Publication number: 20120309011
    Abstract: Methods and compositions for producing variants of a polypeptide are disclosed. Variants are generated using modifying enzymes specifically targeted to the polypeptide through the interaction of a T7 polymerase with a T7 polymerase promoter.
    Type: Application
    Filed: November 2, 2010
    Publication date: December 6, 2012
    Applicant: SALK INSTITUTE FOR BIOLOGICAL STUDIES
    Inventors: Lei Wang, Jeffrey K. Takimoto
  • Patent number: 8318708
    Abstract: This application relates to methods of treating and ameliorating fibrosis, such as fibrosis of the pancreas. In particular, the application relates to methods of using a vitamin D receptor agonist (such as vitamin D, vitamin D analogs, vitamin D precursors, and vitamin D receptor agonists precursors) for the treatment of pancreatic fibrosis.
    Type: Grant
    Filed: May 3, 2010
    Date of Patent: November 27, 2012
    Assignees: Salk Institute for Biological Studies, University of Sydney
    Inventors: Ronald M. Evans, Michael Downes, Christopher Liddle, Nanthakumar Subramaniam, Caroline Flora Samer
  • Publication number: 20120263689
    Abstract: Methods and compositions for generating adipose-derived induced pluripotent stem cells for humans and animals and their use are provided.
    Type: Application
    Filed: September 10, 2010
    Publication date: October 18, 2012
    Applicant: The Salk Institute for Biological Studies
    Inventors: Shigeki Sugii, Ronald M. Evans, Juan Carlos Izpisua Belmonte, Yasuyuki Kida
  • Patent number: 8258099
    Abstract: The invention is directed to peptide modulators of Pin1 and Pin1-related proteins and the use of such modulators for treatment of Pin1 associated states, e.g., for the treatment of cancer or neurodegenerative disease.
    Type: Grant
    Filed: July 15, 2005
    Date of Patent: September 4, 2012
    Assignees: Max-Planck-Gesellschaft zur Foerderung der Wissenschaften E.V., Beth Israel Deaconess Medical Center, Inc., The Salk Institute for Biological Studies
    Inventors: Kun Ping Lu, Robert K. Suto, Janusz M. Sowadski, Gunter S. Fischer, Joseph P. Noel, Mark Verdecia
  • Publication number: 20120221076
    Abstract: An apparatus includes: an input configured to receive information indicative of sensed light locations; memory coupled to the input and storing indicia of receptive fields forming a mosaic, each of the receptive fields corresponding to an electrode, the mosaic including first and receptive fields having first and second shapes that are different, the memory further storing instructions; a processor coupled to the input and the memory and configured to read and execute the instructions to: analyze the information indicative of sensed light locations; determine, for each of respective ones of the sensed light locations, one or more receptive fields that include the corresponding sensed light location; and produce excitation indicia; the apparatus further including an output coupled to the processor and configured to be coupled to a retinal implant and to convey the excitation indicia toward the retinal implant.
    Type: Application
    Filed: August 25, 2010
    Publication date: August 30, 2012
    Applicant: THE SALK INSTITUTE FOR BIOLOGICAL STUDIES
    Inventors: Tatyana O. Sharpee, Charles F. Stevens
  • Patent number: 8252973
    Abstract: CHI like fatty acid binding proteins and genes, recombinant cells and organisms, methods of metabolic pathway engineering to improve lipid production in cells, Crystal structures of CHI like fatty acid binding proteins, methods of engineering CHI like fatty acid binding proteins and systems thereof are provided.
    Type: Grant
    Filed: May 13, 2011
    Date of Patent: August 28, 2012
    Assignee: The Salk Institute for Biological Studies
    Inventors: Florence Pojer, Joseph P. Noel, Elise Larsen, Marianne Bowman, Stephane Richard
  • Patent number: 8247205
    Abstract: This disclosure provides crystalline flavonoid or flavanone isomerases, isolated non-native isomerase having the structural coordinates of said crystalline isomerase, and nucleic acids encoding such non-native isomerase. Also disclosed are methods of predicting the activity and/or substrate specificity of a putative isomerase, methods of identifying potential ismerase substrates, and methods of identifying potential isomerase inhibitors.
    Type: Grant
    Filed: September 3, 2010
    Date of Patent: August 21, 2012
    Assignee: The Salk Institute for Biological Studies
    Inventors: Joseph P Noel, Joseph Jez, Marianne E. Bowman
  • Publication number: 20120202234
    Abstract: Provided herein are methods and compositions relating to the synthesis of isoprenoid diphosphates using a mutated isopentenyl phosphate kinase.
    Type: Application
    Filed: July 19, 2010
    Publication date: August 9, 2012
    Applicant: THE SALK INSTITUTE FOR BIOLOGICAL STUDIES
    Inventors: Joseph P. Noel, Nikki M. Dellas
  • Publication number: 20120189595
    Abstract: The invention relates to the field of stem cells and, specially, to the reprogramming of adult somatic cells; to obtain pluripotent cells by the transfection of specific genes. Thus, the invention provides induced pluripotent stem cells (iPS) and methods of obtaining and using them.
    Type: Application
    Filed: September 25, 2009
    Publication date: July 26, 2012
    Applicant: SALK INSTITUTE FOR BIOLOGICAL STUDIES
    Inventors: Angel Raya, Trond Aasen, Juan Carlos Izpisua Belmonte
  • Publication number: 20120189544
    Abstract: The disclosure provides methods for detection, prognosis and diagnosis of gastrointestinal polyps, cancer diseases and disorders.
    Type: Application
    Filed: June 11, 2010
    Publication date: July 26, 2012
    Applicant: SALK INSTITUTE FOR BIOLOGICAL STUDIES
    Inventors: Reuben J. Shaw, David Shackelford, Debbie Vasquez
  • Publication number: 20120172413
    Abstract: The invention relates to the field of longevity enhancement. More particularly, the invention provides compositions and methods relating to CRTC modulation. In certain embodiments, the invention provides compositions and methods for enhancing longevity in an organism by inhibiting CRTC activity, such as, for example, inhibiting CRTC expression or cellular localization in the organism.
    Type: Application
    Filed: June 28, 2010
    Publication date: July 5, 2012
    Applicant: THE SALK INSTITUTE FOR BIOLOGICAL STUDIES
    Inventors: Andrew Dillin, William Mair, Ianessa Morantte, Reuben Shaw
  • Patent number: 8212006
    Abstract: The present invention provides compositions comprising the ligand binding domain (LBD) of a farnesoid X receptor (FXR) in crystalline form. In alternative embodiments, the LBD of FXR is complexed with a ligand therefor. There are provided high resolution structures of FXR complexed with a novel high affinity agonist fexaramine. The discovered structure of a FXR LBD provides the first three-dimensional view of the structural basis for FXR ligand binding. The present invention further provides a computer for producing a time-dimensional representation of FXR or a complex thereof, and a computer for determining at least a portion of the structure coordinates of FXR or a complex thereof. The present invention further provides methods of using this structural information to predict molecules capable of binding to FXR; to identify compounds with agonist, antagonist or partial agonist activity for FXR; and to determine whether a test compound is capable of binding to the LBD of FXR.
    Type: Grant
    Filed: January 12, 2010
    Date of Patent: July 3, 2012
    Assignee: The Salk Institute for Biological Studies
    Inventors: Michael R. Downes, Mark A. Verdicia, Joseph P. Noel, Ronald M. Evans, Lindsey J. Bowman, Marianne Bowman
  • Publication number: 20120157457
    Abstract: The present invention provides compositions and methods for inducing neuronal cell differentiation.
    Type: Application
    Filed: January 23, 2012
    Publication date: June 21, 2012
    Applicants: The Salk Institute for Biological Studies, The Scripps Research Institute
    Inventors: Masaki Warashina, Kyung Hoon Min, Fred Gage, Peter G. Schultz, Sheng Ding, Tomoko Kuwabara