Patents Assigned to The University of Chicago
  • Patent number: 12042788
    Abstract: Lewis acidic metal-organic framework (MOF) materials comprising triflate-coordinated metal nodes are described. The materials can be used as heterogenous catalysts in a wide range of organic group transformations, including Diels-Alder reactions, epoxide-ring opening reactions, Friedel-Crafts acylation reactions and alkene hydroalkoxylation reactions. The MOFs can also be prepared with metallated organic bridging ligands to provide heterogenous catalysts for tandem reactions and/or prepared as composites with support particles for use in columns of continuous flow reactor systems. Methods of preparing and using the MOF materials and their composites are also described.
    Type: Grant
    Filed: August 21, 2020
    Date of Patent: July 23, 2024
    Assignee: The University of Chicago
    Inventors: Wenbin Lin, Xuanyu Feng, Pengfei Ji
  • Patent number: 12042519
    Abstract: Provided are freeze-dried (FD) products of biological materials that have improved stability and reduced risk of collapse. The FD products include nanoparticles that are added to formulations including the biological materials prior to freeze-drying. Also described herein are methods of freeze-drying (FD).
    Type: Grant
    Filed: July 13, 2018
    Date of Patent: July 23, 2024
    Assignee: The University of Chicago
    Inventors: Juan Jose de Pablo, Johnny D. Alfaro-Perez, Nader Taheri Qazvini
  • Publication number: 20240228586
    Abstract: The disclosure relates to the engineering of collagen-binding modification of masked therapeutic agents comprising one or more tumor-associated protease cleavage sites. Upon exposure to tumor-associated proteases in the tumor microenvironment, the polypeptide is cleaved, which unmasks the therapeutic agent, reducing off-target side effects and toxicity associated with systemic administration. Accordingly, aspects of the disclosure relate to a polypeptide comprising a therapeutic agent linked to a masking agent through a linker, wherein the linker comprises one or more tumor-associated protease cleavage sites, and wherein the masking agent blocks the association of the therapeutic agent to its therapeutic target, and further wherein the polypeptide is operatively linked to a collagen binding domain or a tumor-targeting agent.
    Type: Application
    Filed: May 5, 2022
    Publication date: July 11, 2024
    Applicant: THE UNIVERSITY OF CHICAGO
    Inventors: Jeffrey HUBBELL, Jun ISHIHARA, Juan MENDOZA, Aslan MANSUROV
  • Patent number: 12034049
    Abstract: Provided are a superlattice structure including a two-dimensional material and a device including the superlattice structure. The superlattice structure may include at least two different two-dimensional (2D) materials bonded to each other in a lateral direction, and an interfacial region of the at least two 2D materials may be strained. The superlattice structure may have a bandgap adjusted by the interfacial region that is strained. The at least two 2D materials may include first and second 2D materials. The first 2D material may have a first bandgap in an intrinsic state thereof. The second 2D material may have a second bandgap in an intrinsic state thereof. An interfacial region of the first and second 2D materials and an adjacent region may have a third bandgap between the first bandgap and the second bandgap.
    Type: Grant
    Filed: November 2, 2022
    Date of Patent: July 9, 2024
    Assignees: Samsung Electronics Co., Ltd., The University of Chicago, Center for Technology Licensing at Cornell University
    Inventors: Minhyun Lee, Jiwoong Park, Saien Xie, Jinseong Heo, Hyeonjin Shin
  • Patent number: 12030081
    Abstract: Disclosed herein are inventive methods of making thin films, inventive thin films, and inventive articles and systems comprising thin films. Certain embodiments are related to methods of making thin films in which reagents are arranged within a first phase and a second phase such that at least one reagent reacts to form a thin film proximate to the interface between the first phase and the second phase. Thin films (including two-dimensional materials) disclosed herein can have one or more of a variety of beneficial properties including large lateral dimension(s), lateral continuity, high mechanical strength, consistent spatial composition, and/or consistent thickness. In accordance with certain embodiments, thin films disclosed herein can be combined to form a variety of inventive multi-layer articles, including multi-layer articles comprising a combination of thin films having different compositions that interact with each other via van der Waals forces.
    Type: Grant
    Filed: October 6, 2020
    Date of Patent: July 9, 2024
    Assignee: The University of Chicago
    Inventors: Jiwoong Park, Yu Zhong, Baorui Cheng
  • Publication number: 20240218419
    Abstract: In aspects, the present disclosure provides methods for quantifying microorganisms. In aspects, the present disclosure provides methods for identifying microorganisms. In aspects, the present disclosure provides methods of analyzing food. In aspects, the present disclosure provides methods of treating a human subject having an infection. In aspects, the present disclosure provides methods of analyzing environmental samples.
    Type: Application
    Filed: August 6, 2021
    Publication date: July 4, 2024
    Applicants: The University of Chicago, Duquesne University of the Holy Spirit
    Inventors: Melikhan Tanyeri, Jing Lin, Mustafa F. Abasiyanik, Yulder D. Angarita Marmolejo
  • Publication number: 20240209430
    Abstract: The methods, compositions, and kits of the disclosure provide a novel approach for a whole genome, unbiased DNA analysis method that can be performed on limited amounts of DNA can be used to analyze DNA to determine its modification status. Aspects of the disclosure relate to a method for amplifying bisulfite-treated deoxyribonucleic acid (DNA) molecules comprising: (a) ligating an adaptor to the DNA molecules, wherein the adaptor comprises a RNA polymerase promoter comprising bisulfite-protected cytosines; (b) treating the ligated DNA molecules with bisulfite; (c) hybridizing the bisulfite-treated DNA molecules with a primer; (d) extending the hybridized primer to make double stranded DNA; and (e) in vitro transcribing the double-stranded DNA to make RNA.
    Type: Application
    Filed: January 11, 2024
    Publication date: June 27, 2024
    Applicant: The University of Chicago
    Inventors: Chuan HE, Ji NIE, Xiao-Long CUI
  • Patent number: 12016899
    Abstract: Provided herein are compositions comprising Sel1-derived peptides thereof, and method of use thereof for the treatment/prevention excess oxalate levels and conditions and diseases related thereto. In particular, peptides comprise Sel-like repeat (SLR) domains and/or tetratricopeptide (TPR) domains and may be linked together or with other peptides or polypeptides to treat/prevent diseases/conditions related to excess oxalate levels, such as hyperoxaluria and/or hyperoxalemia.
    Type: Grant
    Filed: July 18, 2019
    Date of Patent: June 25, 2024
    Assignee: The University of Chicago
    Inventors: Hatim A. Hassan, Donna Arvans
  • Publication number: 20240199757
    Abstract: Aspects of the present disclosure are directed to NT5E (CD73)-targeting polypeptides, including antibodies, antibody-drug conjugates, antibody fragments, antibody-like molecules, and chimeric receptors. Also disclosed herein are nucleic acids encoding for such NT5E-targeting polypeptides and cells comprising such nucleic acids. Described are methods for treatment of cancer using NT5E-targeting polypeptides.
    Type: Application
    Filed: February 28, 2024
    Publication date: June 20, 2024
    Applicant: THE UNIVERSITY OF CHICAGO
    Inventors: Anthony KOSSIAKOFF, Carla E. MEINTS, Somnath MUKHERJEE
  • Patent number: 12015093
    Abstract: Photodetectors based on colloidal quantum dots and methods of making the photodetectors are provided. Also provided are methods for doping films of colloidal quantum dots via a solid-state cation exchange method. The photodetectors include multi-band photodetectors composed of two or more rectifying photodiodes stacked in aback-to-back configuration. The doping methods rely on a solid-state cation exchange that employs sacrificial semiconductor nanoparticles as a dopant source for a film of colloidal quantum dots.
    Type: Grant
    Filed: January 31, 2020
    Date of Patent: June 18, 2024
    Assignee: THE UNIVERSITY OF CHICAGO
    Inventors: Philippe Guyot-Sionnest, Xin Tang, Matthew M. Ackerman
  • Publication number: 20240190927
    Abstract: The present invention concerns methods and compositions for treating or preventing a bacterial infection, particularly infection by a Staphylococcus bacterium. The invention provides methods and compositions for stimulating an immune response against the bacteria. In certain embodiments, the methods and compositions involve a non-toxigenic Protein A (SpA) variant.
    Type: Application
    Filed: February 21, 2024
    Publication date: June 13, 2024
    Applicant: THE UNIVERSITY OF CHICAGO
    Inventors: Olaf SCHNEEWIND, Alice G. CHENG, Dominique M. MISSIAKAS, Hwan Keun Kim
  • Publication number: 20240175093
    Abstract: Methods, assays, and compositions for identifying molecular subtypes of metastatic cancer are disclosed. Methods include determining expression levels of genes and/or miRNAs in a sample of metastatic tissue and identifying the molecular subtype of the metastasis based on the determined expression levels using a neural network-based classifier. Methods may further include providing a prognosis and making treatment decision based on the molecular subtype of the metastasis.
    Type: Application
    Filed: March 25, 2022
    Publication date: May 30, 2024
    Applicants: The University of Chicago, NorthShore University HealthSystem
    Inventors: Sean PITRODA, Mitchell POSNER, Ralph WEICHSELBAUM, Mark TALAMONTI
  • Publication number: 20240170101
    Abstract: Aspects of the disclosure include analysis methods and systems useful in, for example, determining protein-protein interaction, characterizing emergent biological function, and discovery of novel protein function. Aspects include generating a spectral matrix representing variation of genetic elements based at least in part on singular value decomposition (SVD) of a first matrix comprising entries representing a number of times each of a genetic element appears in each of a detectable proteome. Biological information contained in one or more cells of the spectral matrix may be quantified to obtain statistical interactions between the genetic elements. The obtained statistical interactions may be correlated with benchmarked biological interactions. Accordingly, a protein-protein interaction may be classified using correlations between the statistical interactions and the benchmarked biological interactions.
    Type: Application
    Filed: March 16, 2022
    Publication date: May 23, 2024
    Applicants: The University of Chicago, Washington University
    Inventors: Arjun S. RAMAN, Mark A. ZAYDMAN
  • Patent number: 11986670
    Abstract: A method of radiating a plurality of masses in a patient is provided, including receiving a three-dimensional model of the patient, the model including respective locations of a plurality of OARs, receiving a set of locations in the model corresponding to the masses, respective prescribed radiation dosages for the masses, and respective radiation limits for the OARs. The method includes computing a candidate set of beams having respective beam paths that travel through at least one of the masses. The method includes scoring the candidate set of beams based on respective dosages provided to the masses, respective dosages provided to the OARs, and beams in a set of selected beams for treatment, adding a best-scoring beam among the candidate set of beams to the set of selected beams, and radiating the masses using the set of selected beams.
    Type: Grant
    Filed: September 18, 2019
    Date of Patent: May 21, 2024
    Assignee: THE UNIVERSITY OF CHICAGO
    Inventors: Steven J Chmura, Shan Lu, Ralph R. Weichselbaum
  • Publication number: 20240150294
    Abstract: Provided is a compound of formula (I) or a pharmaceutically acceptable salt thereof, in which R1, R2, R3, R4, R5, X1, X2, and n are described herein. Also provided is a method of treating an estrogen-mediated disease requiring inhibition of estrogen receptor alpha (ER-alpha), such as cancer, in a subject or inhibiting ER-alpha in a cell with the compound of formula (I) or a pharmaceutically acceptable salt thereof.
    Type: Application
    Filed: February 17, 2022
    Publication date: May 9, 2024
    Applicants: The University of Chicago, Loyola University of Chicago
    Inventors: Sean W. Fanning, Geoffrey L. Greene, David J. Hosfield
  • Patent number: 11965890
    Abstract: One aspect of the present invention describes materials and methods of quantitatively measuring the density or percent occupancy of DNA binding proteins such as histones, histone variants, histone post translational modifications and transcription factors in chromatin at given DNA loci. One embodiment measures a factor's average quantity at specific gene loci, and controls for a number of pitfalls concerning antibody quality and handling issues. Other embodiments include calibrating and quantifying chromatin immunoprecipitation assays, assessing an affinity reagent specificity, as well as required reagents and their formulation in kits. Another embodiment allows for the diagnosis of a condition or disease by measuring the density of a histone modification at a genomic locus.
    Type: Grant
    Filed: June 19, 2020
    Date of Patent: April 23, 2024
    Assignee: THE UNIVERSITY OF CHICAGO
    Inventors: Alexander J. Ruthenburg, Adrian Grzybowski, Zhonglei Chen
  • Patent number: 11964944
    Abstract: Disclosed herein are novel compounds for treating apicomplexan parasite related disorders, methods for their use; cell line and non-human animal models of the dormant parasite phenotype and methods for their use in identifying new drugs to treat apicomplexan parasite related disorders, and biomarkers to identify disease due to the parasite and its response to treatment.
    Type: Grant
    Filed: June 2, 2022
    Date of Patent: April 23, 2024
    Assignees: The University of Chicago, J. Craig Venter Institute, Inc., The University of Sheffield, Institute for Systems Biology, The University of Leeds, The University of Strathclyde, The Government of the United States
    Inventors: Rima McLeod, Martin McPhillie, Colin W. G. Fishwick, Hernan Alejandro Lorenzi, Kai Wang, Taek-Kyun Kim, Yong Zhou, Leroy E. Hood, Ying Zhou, Kamal El Bissati, Mark Hickman, QiGui Li, Craig Roberts
  • Patent number: 11967411
    Abstract: A device, system, and method determines a reading environment by synthesizing downstream needs. The method at a workflow server includes receiving a request from a physician device utilized by a referring physician, the request directed to performing an imaging procedure. The method includes determining at least one normalized need from the request, the normalized need corresponding to the referring physician. The method includes generating information to be included in a reading environment based on the at least one normalized need, the information assisting an image interpreter in interpreting the imaging procedure.
    Type: Grant
    Filed: April 10, 2018
    Date of Patent: April 23, 2024
    Assignees: KONINKLIJKE PHILIPS N.V., THE UNIVERSITY OF CHICAGO
    Inventors: Merlijn Sevenster, Paul Joseph Chang
  • Publication number: 20240119337
    Abstract: The present disclosure describes various methods, systems, and storage medium for engineering fast bias-preserving gates on stabilized cat qubits. One method for performing a quantum operation on a qubit using a noise-bias-preserving (NBP) quantum gate includes obtaining and stabilizing the qubit; determining a type of the NBP quantum gate associated with the quantum operation, according to type of the NBP quantum gate, the quantum operation on the qubit to obtain a modified qubit, the quantum operation comprising a base gate drive and a counterdiabatic (CD) control drive. Another method for stabilizing a qubit for quantum storage includes obtaining a qubit; in response to the qubit being in an idle state, applying a two-photon dissipation operation on the qubit to stabilize the qubit, the two-photon dissipation operation corresponding to a two-photon drive.
    Type: Application
    Filed: January 14, 2022
    Publication date: April 11, 2024
    Applicant: The University of Chicago
    Inventors: Qian XU, LIANG JIANG
  • Patent number: 11951178
    Abstract: A nanoparticle delivery system designed for sustained delivery of microRNA-150 (miR-150) to FLT3-overexpressing acute myeloid leukemia (AML) cells, the delivery system comprising poly(amidoamine) (PAMAM) dendrimers complexed with miR-150, wherein at least one dendrimer is surface-functionalized with a ligand specific for FLT3 receptor, and methods for treating AML characterized by FLT3-overexpression are provided.
    Type: Grant
    Filed: July 14, 2021
    Date of Patent: April 9, 2024
    Assignees: University of Cincinnati, University of Chicago, The Board of Trustees of the University of Illinois
    Inventors: Jianjun Chen, Seungpyo Hong, Xi Jiang, Zejuan Li