Patents Assigned to The University of Chicago
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Patent number: 12042788Abstract: Lewis acidic metal-organic framework (MOF) materials comprising triflate-coordinated metal nodes are described. The materials can be used as heterogenous catalysts in a wide range of organic group transformations, including Diels-Alder reactions, epoxide-ring opening reactions, Friedel-Crafts acylation reactions and alkene hydroalkoxylation reactions. The MOFs can also be prepared with metallated organic bridging ligands to provide heterogenous catalysts for tandem reactions and/or prepared as composites with support particles for use in columns of continuous flow reactor systems. Methods of preparing and using the MOF materials and their composites are also described.Type: GrantFiled: August 21, 2020Date of Patent: July 23, 2024Assignee: The University of ChicagoInventors: Wenbin Lin, Xuanyu Feng, Pengfei Ji
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Patent number: 12042519Abstract: Provided are freeze-dried (FD) products of biological materials that have improved stability and reduced risk of collapse. The FD products include nanoparticles that are added to formulations including the biological materials prior to freeze-drying. Also described herein are methods of freeze-drying (FD).Type: GrantFiled: July 13, 2018Date of Patent: July 23, 2024Assignee: The University of ChicagoInventors: Juan Jose de Pablo, Johnny D. Alfaro-Perez, Nader Taheri Qazvini
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Publication number: 20240228586Abstract: The disclosure relates to the engineering of collagen-binding modification of masked therapeutic agents comprising one or more tumor-associated protease cleavage sites. Upon exposure to tumor-associated proteases in the tumor microenvironment, the polypeptide is cleaved, which unmasks the therapeutic agent, reducing off-target side effects and toxicity associated with systemic administration. Accordingly, aspects of the disclosure relate to a polypeptide comprising a therapeutic agent linked to a masking agent through a linker, wherein the linker comprises one or more tumor-associated protease cleavage sites, and wherein the masking agent blocks the association of the therapeutic agent to its therapeutic target, and further wherein the polypeptide is operatively linked to a collagen binding domain or a tumor-targeting agent.Type: ApplicationFiled: May 5, 2022Publication date: July 11, 2024Applicant: THE UNIVERSITY OF CHICAGOInventors: Jeffrey HUBBELL, Jun ISHIHARA, Juan MENDOZA, Aslan MANSUROV
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Patent number: 12034049Abstract: Provided are a superlattice structure including a two-dimensional material and a device including the superlattice structure. The superlattice structure may include at least two different two-dimensional (2D) materials bonded to each other in a lateral direction, and an interfacial region of the at least two 2D materials may be strained. The superlattice structure may have a bandgap adjusted by the interfacial region that is strained. The at least two 2D materials may include first and second 2D materials. The first 2D material may have a first bandgap in an intrinsic state thereof. The second 2D material may have a second bandgap in an intrinsic state thereof. An interfacial region of the first and second 2D materials and an adjacent region may have a third bandgap between the first bandgap and the second bandgap.Type: GrantFiled: November 2, 2022Date of Patent: July 9, 2024Assignees: Samsung Electronics Co., Ltd., The University of Chicago, Center for Technology Licensing at Cornell UniversityInventors: Minhyun Lee, Jiwoong Park, Saien Xie, Jinseong Heo, Hyeonjin Shin
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Patent number: 12030081Abstract: Disclosed herein are inventive methods of making thin films, inventive thin films, and inventive articles and systems comprising thin films. Certain embodiments are related to methods of making thin films in which reagents are arranged within a first phase and a second phase such that at least one reagent reacts to form a thin film proximate to the interface between the first phase and the second phase. Thin films (including two-dimensional materials) disclosed herein can have one or more of a variety of beneficial properties including large lateral dimension(s), lateral continuity, high mechanical strength, consistent spatial composition, and/or consistent thickness. In accordance with certain embodiments, thin films disclosed herein can be combined to form a variety of inventive multi-layer articles, including multi-layer articles comprising a combination of thin films having different compositions that interact with each other via van der Waals forces.Type: GrantFiled: October 6, 2020Date of Patent: July 9, 2024Assignee: The University of ChicagoInventors: Jiwoong Park, Yu Zhong, Baorui Cheng
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Publication number: 20240218419Abstract: In aspects, the present disclosure provides methods for quantifying microorganisms. In aspects, the present disclosure provides methods for identifying microorganisms. In aspects, the present disclosure provides methods of analyzing food. In aspects, the present disclosure provides methods of treating a human subject having an infection. In aspects, the present disclosure provides methods of analyzing environmental samples.Type: ApplicationFiled: August 6, 2021Publication date: July 4, 2024Applicants: The University of Chicago, Duquesne University of the Holy SpiritInventors: Melikhan Tanyeri, Jing Lin, Mustafa F. Abasiyanik, Yulder D. Angarita Marmolejo
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Publication number: 20240209430Abstract: The methods, compositions, and kits of the disclosure provide a novel approach for a whole genome, unbiased DNA analysis method that can be performed on limited amounts of DNA can be used to analyze DNA to determine its modification status. Aspects of the disclosure relate to a method for amplifying bisulfite-treated deoxyribonucleic acid (DNA) molecules comprising: (a) ligating an adaptor to the DNA molecules, wherein the adaptor comprises a RNA polymerase promoter comprising bisulfite-protected cytosines; (b) treating the ligated DNA molecules with bisulfite; (c) hybridizing the bisulfite-treated DNA molecules with a primer; (d) extending the hybridized primer to make double stranded DNA; and (e) in vitro transcribing the double-stranded DNA to make RNA.Type: ApplicationFiled: January 11, 2024Publication date: June 27, 2024Applicant: The University of ChicagoInventors: Chuan HE, Ji NIE, Xiao-Long CUI
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Patent number: 12016899Abstract: Provided herein are compositions comprising Sel1-derived peptides thereof, and method of use thereof for the treatment/prevention excess oxalate levels and conditions and diseases related thereto. In particular, peptides comprise Sel-like repeat (SLR) domains and/or tetratricopeptide (TPR) domains and may be linked together or with other peptides or polypeptides to treat/prevent diseases/conditions related to excess oxalate levels, such as hyperoxaluria and/or hyperoxalemia.Type: GrantFiled: July 18, 2019Date of Patent: June 25, 2024Assignee: The University of ChicagoInventors: Hatim A. Hassan, Donna Arvans
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Publication number: 20240199757Abstract: Aspects of the present disclosure are directed to NT5E (CD73)-targeting polypeptides, including antibodies, antibody-drug conjugates, antibody fragments, antibody-like molecules, and chimeric receptors. Also disclosed herein are nucleic acids encoding for such NT5E-targeting polypeptides and cells comprising such nucleic acids. Described are methods for treatment of cancer using NT5E-targeting polypeptides.Type: ApplicationFiled: February 28, 2024Publication date: June 20, 2024Applicant: THE UNIVERSITY OF CHICAGOInventors: Anthony KOSSIAKOFF, Carla E. MEINTS, Somnath MUKHERJEE
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Patent number: 12015093Abstract: Photodetectors based on colloidal quantum dots and methods of making the photodetectors are provided. Also provided are methods for doping films of colloidal quantum dots via a solid-state cation exchange method. The photodetectors include multi-band photodetectors composed of two or more rectifying photodiodes stacked in aback-to-back configuration. The doping methods rely on a solid-state cation exchange that employs sacrificial semiconductor nanoparticles as a dopant source for a film of colloidal quantum dots.Type: GrantFiled: January 31, 2020Date of Patent: June 18, 2024Assignee: THE UNIVERSITY OF CHICAGOInventors: Philippe Guyot-Sionnest, Xin Tang, Matthew M. Ackerman
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Publication number: 20240190927Abstract: The present invention concerns methods and compositions for treating or preventing a bacterial infection, particularly infection by a Staphylococcus bacterium. The invention provides methods and compositions for stimulating an immune response against the bacteria. In certain embodiments, the methods and compositions involve a non-toxigenic Protein A (SpA) variant.Type: ApplicationFiled: February 21, 2024Publication date: June 13, 2024Applicant: THE UNIVERSITY OF CHICAGOInventors: Olaf SCHNEEWIND, Alice G. CHENG, Dominique M. MISSIAKAS, Hwan Keun Kim
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Publication number: 20240175093Abstract: Methods, assays, and compositions for identifying molecular subtypes of metastatic cancer are disclosed. Methods include determining expression levels of genes and/or miRNAs in a sample of metastatic tissue and identifying the molecular subtype of the metastasis based on the determined expression levels using a neural network-based classifier. Methods may further include providing a prognosis and making treatment decision based on the molecular subtype of the metastasis.Type: ApplicationFiled: March 25, 2022Publication date: May 30, 2024Applicants: The University of Chicago, NorthShore University HealthSystemInventors: Sean PITRODA, Mitchell POSNER, Ralph WEICHSELBAUM, Mark TALAMONTI
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Publication number: 20240170101Abstract: Aspects of the disclosure include analysis methods and systems useful in, for example, determining protein-protein interaction, characterizing emergent biological function, and discovery of novel protein function. Aspects include generating a spectral matrix representing variation of genetic elements based at least in part on singular value decomposition (SVD) of a first matrix comprising entries representing a number of times each of a genetic element appears in each of a detectable proteome. Biological information contained in one or more cells of the spectral matrix may be quantified to obtain statistical interactions between the genetic elements. The obtained statistical interactions may be correlated with benchmarked biological interactions. Accordingly, a protein-protein interaction may be classified using correlations between the statistical interactions and the benchmarked biological interactions.Type: ApplicationFiled: March 16, 2022Publication date: May 23, 2024Applicants: The University of Chicago, Washington UniversityInventors: Arjun S. RAMAN, Mark A. ZAYDMAN
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Patent number: 11986670Abstract: A method of radiating a plurality of masses in a patient is provided, including receiving a three-dimensional model of the patient, the model including respective locations of a plurality of OARs, receiving a set of locations in the model corresponding to the masses, respective prescribed radiation dosages for the masses, and respective radiation limits for the OARs. The method includes computing a candidate set of beams having respective beam paths that travel through at least one of the masses. The method includes scoring the candidate set of beams based on respective dosages provided to the masses, respective dosages provided to the OARs, and beams in a set of selected beams for treatment, adding a best-scoring beam among the candidate set of beams to the set of selected beams, and radiating the masses using the set of selected beams.Type: GrantFiled: September 18, 2019Date of Patent: May 21, 2024Assignee: THE UNIVERSITY OF CHICAGOInventors: Steven J Chmura, Shan Lu, Ralph R. Weichselbaum
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Publication number: 20240150294Abstract: Provided is a compound of formula (I) or a pharmaceutically acceptable salt thereof, in which R1, R2, R3, R4, R5, X1, X2, and n are described herein. Also provided is a method of treating an estrogen-mediated disease requiring inhibition of estrogen receptor alpha (ER-alpha), such as cancer, in a subject or inhibiting ER-alpha in a cell with the compound of formula (I) or a pharmaceutically acceptable salt thereof.Type: ApplicationFiled: February 17, 2022Publication date: May 9, 2024Applicants: The University of Chicago, Loyola University of ChicagoInventors: Sean W. Fanning, Geoffrey L. Greene, David J. Hosfield
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Patent number: 11965890Abstract: One aspect of the present invention describes materials and methods of quantitatively measuring the density or percent occupancy of DNA binding proteins such as histones, histone variants, histone post translational modifications and transcription factors in chromatin at given DNA loci. One embodiment measures a factor's average quantity at specific gene loci, and controls for a number of pitfalls concerning antibody quality and handling issues. Other embodiments include calibrating and quantifying chromatin immunoprecipitation assays, assessing an affinity reagent specificity, as well as required reagents and their formulation in kits. Another embodiment allows for the diagnosis of a condition or disease by measuring the density of a histone modification at a genomic locus.Type: GrantFiled: June 19, 2020Date of Patent: April 23, 2024Assignee: THE UNIVERSITY OF CHICAGOInventors: Alexander J. Ruthenburg, Adrian Grzybowski, Zhonglei Chen
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Patent number: 11964944Abstract: Disclosed herein are novel compounds for treating apicomplexan parasite related disorders, methods for their use; cell line and non-human animal models of the dormant parasite phenotype and methods for their use in identifying new drugs to treat apicomplexan parasite related disorders, and biomarkers to identify disease due to the parasite and its response to treatment.Type: GrantFiled: June 2, 2022Date of Patent: April 23, 2024Assignees: The University of Chicago, J. Craig Venter Institute, Inc., The University of Sheffield, Institute for Systems Biology, The University of Leeds, The University of Strathclyde, The Government of the United StatesInventors: Rima McLeod, Martin McPhillie, Colin W. G. Fishwick, Hernan Alejandro Lorenzi, Kai Wang, Taek-Kyun Kim, Yong Zhou, Leroy E. Hood, Ying Zhou, Kamal El Bissati, Mark Hickman, QiGui Li, Craig Roberts
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Patent number: 11967411Abstract: A device, system, and method determines a reading environment by synthesizing downstream needs. The method at a workflow server includes receiving a request from a physician device utilized by a referring physician, the request directed to performing an imaging procedure. The method includes determining at least one normalized need from the request, the normalized need corresponding to the referring physician. The method includes generating information to be included in a reading environment based on the at least one normalized need, the information assisting an image interpreter in interpreting the imaging procedure.Type: GrantFiled: April 10, 2018Date of Patent: April 23, 2024Assignees: KONINKLIJKE PHILIPS N.V., THE UNIVERSITY OF CHICAGOInventors: Merlijn Sevenster, Paul Joseph Chang
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Publication number: 20240119337Abstract: The present disclosure describes various methods, systems, and storage medium for engineering fast bias-preserving gates on stabilized cat qubits. One method for performing a quantum operation on a qubit using a noise-bias-preserving (NBP) quantum gate includes obtaining and stabilizing the qubit; determining a type of the NBP quantum gate associated with the quantum operation, according to type of the NBP quantum gate, the quantum operation on the qubit to obtain a modified qubit, the quantum operation comprising a base gate drive and a counterdiabatic (CD) control drive. Another method for stabilizing a qubit for quantum storage includes obtaining a qubit; in response to the qubit being in an idle state, applying a two-photon dissipation operation on the qubit to stabilize the qubit, the two-photon dissipation operation corresponding to a two-photon drive.Type: ApplicationFiled: January 14, 2022Publication date: April 11, 2024Applicant: The University of ChicagoInventors: Qian XU, LIANG JIANG
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Patent number: 11951178Abstract: A nanoparticle delivery system designed for sustained delivery of microRNA-150 (miR-150) to FLT3-overexpressing acute myeloid leukemia (AML) cells, the delivery system comprising poly(amidoamine) (PAMAM) dendrimers complexed with miR-150, wherein at least one dendrimer is surface-functionalized with a ligand specific for FLT3 receptor, and methods for treating AML characterized by FLT3-overexpression are provided.Type: GrantFiled: July 14, 2021Date of Patent: April 9, 2024Assignees: University of Cincinnati, University of Chicago, The Board of Trustees of the University of IllinoisInventors: Jianjun Chen, Seungpyo Hong, Xi Jiang, Zejuan Li