Patents Examined by Yong D. Pak
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sp. CAS12A mutants with enhanced cleavage activity at non-canonical TTTT protospacer adjacent motifs
Patent number: 11965185Abstract: Described herein are CAS12A mutants from Lachnospiraceae bacterium and methods for use thereof. These mutants have enhanced DNA cleavage activities at non-canonical TTTT protospacer adjacent motifs (PAM) compared to the wild-type enzyme.Type: GrantFiled: April 30, 2021Date of Patent: April 23, 2024Assignee: INTEGRATED DNA TECHNOLOGIES, INC.Inventors: Liyang Zhang, Christopher Anthony Vakulskas -
Patent number: 11959113Abstract: The disclosure discloses a production process and application of fermented tapioca starch for baking, and belongs to the fields of starch deep processing and food processing and production. The disclosure develops a production method of the fermented tapioca starch for baking. The method includes simple steps and greatly shortens a process cycle. By using tapioca starch as a main raw material and adding a specific amount of carbon source and a specific strain, under the action of fermentation and illumination in cooperation, the structure of the starch is improved. By adding the fermented tapioca starch, the effects of increasing the size of gluten-free Mochi bread, increasing pores of the bread and improving the texture and taste of the bread are realized.Type: GrantFiled: December 1, 2020Date of Patent: April 16, 2024Assignee: JIANGNAN UNIVERSITYInventors: Yan Hong, Qiaoting Qi, Zhengbiao Gu, Li Cheng, Zhaofeng Li, Caiming Li
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Patent number: 11959106Abstract: The present invention relates to compositions, methods and use of a mixture of enzymes having DNase activity and an enzyme having hexosaminidase activity.Type: GrantFiled: July 11, 2022Date of Patent: April 16, 2024Assignee: Novozymes A/SInventors: Rebecca Munk Vejborg, Klaus Gori, Lilian Eva Tang Baltsen
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Patent number: 11952602Abstract: The present invention relates to polypeptide variants of porcine trypsin, to nucleic acid molecules encoding these variants, and to host cells comprising such nucleic acid molecules. It also relates to the use of these variants in methods for producing insulin. The invention further relates to the use of these variants as medicaments, as food ingredients, or as feed ingredients and to the use of these variants within a process of manufacturing a food ingredient or a feed ingredient.Type: GrantFiled: October 27, 2022Date of Patent: April 9, 2024Assignee: SANOFI-AVENTIS DEUTSCHLAND GMBHInventors: Thomas Stillger, Sebastian Rissom, Claudia Feller, Andreas Vogel
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Patent number: 11946036Abstract: The present invention discloses a bacterium and an obtaining method and application thereof. The bacterium has a property of coproducing 1,3-propanediol and D-lactic acid. Further, the bacterium is Klebsiella oxytoca, including Klebsiella oxytoca PDL-5 CCTCC M 2016185. The obtaining method of the bacterium may be to obtain the bacterium by directly screening wild bacteria that satisfy conditions from the environment or performing gene engineering modification to wild bacteria. The present invention has the advantages that the bacteria can coproduce 1,3-propanediol and D-lactic acid through fermentation, the molar conversion rate and the concentration of the two products are very high, the types of byproducts are few, the concentration is low, the product extraction process is simplified, the high-efficiency biological production of 1,3-propanediol and D-lactic acid can be realized, and the industrial application prospect is very great.Type: GrantFiled: February 14, 2022Date of Patent: April 2, 2024Assignee: Shanghai Jiao Tong UniversityInventors: Ping Xu, Bo Xin, Fei Tao, Yu Wang, Hongzhi Tang, Cuiqing Ma
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Patent number: 11939610Abstract: This disclosure describes a novel, ready-to-use protease composition in the form of a film or pouch composition. The protease composition can be used for stabilizing a biological sample containing a nucleic acid molecule for storage or transportation. It allows quick removal of protein contamination in the biological sample, thus facilitating sample preparation for nucleic acid detection or extraction.Type: GrantFiled: September 16, 2021Date of Patent: March 26, 2024Assignee: NeoGeneStar LLCInventors: Nancy Quan, Zheng Wang, Thor W. Nilsen
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Patent number: 11932884Abstract: Some aspects of this disclosure provide strategies, systems, reagents, methods, and kits that are useful for the targeted editing of nucleic acids, including editing a single site within the genome of a cell or subject, e.g., within the human genome. In some embodiments, fusion proteins comprise a Gam protein, a napDNAbp, and a cytidine deaminase. In some embodiments, the fusion proteins further comprise a UGI domain. In some embodiments, methods for targeted nucleic acid editing are provided. In some embodiments, reagents and kits for the generation of targeted nucleic acid editing proteins, e.g., fusion proteins of a Gam protein, a cytidine deaminase and nucleic acid editing proteins or domains, are provided.Type: GrantFiled: March 21, 2022Date of Patent: March 19, 2024Assignee: President and Fellows of Harvard CollegeInventors: David R. Liu, Kevin Tianmeng Zhao, Yongjoo Kim
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Patent number: 11932885Abstract: The present invention relates to the use of glutamine synthetase as a protein therapy (such as enzyme replacement protein therapy) for the treatment of hyperammonemia. In particular the invention relates to the systemic administration of glutamine synthetase. The glutamine synthetase may be provided in conjugated or fusion form, to increase its half-life in the circulation. Also provided is a pharmaceutical composition comprising glutamine synthetase. The invention also relates to the uses, methods, and compositions involving a combination of the glutamine synthetase protein and an ammonia lowering agent, such as a nitrogen scavenger.Type: GrantFiled: June 3, 2022Date of Patent: March 19, 2024Assignee: Thoeris GmbHInventor: Tamara Nicolson
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Patent number: 11926855Abstract: An enzyme composition containing a protease combination or a protease mixture having neutral metalloprotease and serine alkaline protease activity, and an amylase. Feed compositions, additives and formulations containing the enzyme composition in methods for improving digestibility of proteins in an animal diet or animal feed, as well as optimizing the nutritional value of an animal diet or animal feed.Type: GrantFiled: December 21, 2020Date of Patent: March 12, 2024Assignee: Kerry Group Services International LimitedInventors: Niall Higgins, Jacques Georis, Sara Llamas Moya, Nathan Marshall, Derek Carr, Rachel Maloney, Laura Guaras
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Patent number: 11920171Abstract: The present disclosure describes genes and proteins of the coenzyme F430 synthetic pathway. The genes and proteins in the pathway find uses as isolated nucleic acids, transformation vectors, a transformation media, genetically modified cells, methods of modulating methanogenesis, methods of modulating methane oxidation, methods of making a tetrapyrrole compound, methods of oxidizing methane, methods of biogenic methane synthesis is provided, methods of assaying an organism for potential methanogenic or methanotrophic activity, and isolated proteins.Type: GrantFiled: June 10, 2020Date of Patent: March 5, 2024Assignee: Auburn UniversityInventor: Steven Mansoorabadi
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Patent number: 11905534Abstract: Disclosed in the present invention is an L-glutamate dehydrogenase mutant, the sequence of the L-glutamate dehydrogenase mutant being a sequence in which amino acid residue A at position 175 in SEQ ID NO: 1 is mutated to be G, and amino acid residue V at position 386 is mutated to be an amino acid residue having less steric hindrance. Further disclosed in the present invention is an application of the described L-amino acid dehydrogenase mutant in the preparation of L-glufosinate-ammonium or a salt thereof. When the L-glutamate dehydrogenase mutant of the present invention is used to prepare L-glufosinate-ammonium or a salt thereof, compared to an L-glutamate dehydrogenase mutant in which only position 175 or 386 is mutated, the specific enzyme activity is higher. Therefore, the action efficiency of the enzyme is improved, reaction costs are reduced, and industrial production is facilitated.Type: GrantFiled: November 19, 2021Date of Patent: February 20, 2024Assignee: SHANGHAI QIZHOU ZIYUE BIOTECHNOLOGY CO., LTDInventors: Zhenhua Tian, Zhanbing Cheng, Shaonan Ding, Qi Jiao, Wenxuan Xu, Yao Huang, Feng Jiang
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Patent number: 11898174Abstract: The present invention provides engineered uridine phosphorylase (UP) enzymes, polypeptides having UP activity, and polynucleotides encoding these enzymes, as well as vectors and host cells comprising these polynucleotides and polypeptides. Methods for producing UP enzymes are also provided. The present invention further provides compositions comprising the UP enzymes and methods of using the engineered UP enzymes. The present invention finds particular use in the production of pharmaceutical compounds.Type: GrantFiled: December 17, 2021Date of Patent: February 13, 2024Assignee: Codexis, Inc.Inventors: Jonathan Vroom, Jessica Anna Hurtak, Anders Matthew Knight
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Patent number: 11884940Abstract: The present application relates to methods to improve biomass or lipid production in a microorganism from one or more fatty acid and one or more simple carbon co-substrates. Produced lipids may include unsaturated C6-C24 fatty acids, alcohols, aldehydes, and acetates which may be useful as final products or precursors to insect pheromones, fragrances, flavors, and polymer intermediates. The application further relates to recombinant microorganisms modified for improved production of biomass or lipid, or improved lipid selectivity. Also provided are methods of producing one or more lipid using the recombinant microorganisms, as well as compositions comprising the recombinant microorganisms and/or optionally one or more of the product lipid.Type: GrantFiled: December 14, 2021Date of Patent: January 30, 2024Assignee: Provivi, Inc.Inventors: Effendi Leonard, Micah Sheppard, Thomas Heel, Kathryn Christina Wu
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Patent number: 11884942Abstract: An isolated and/or purified ?-glucanotransferase from Exiguobacterium acetylicum, recombinantly engineered variants thereof, active fragments thereof, synthetic nucleic acids encoding the ?-glucanotransferase and variants thereof, host cells comprising the synthetic nucleic acids, and compositions comprising the ?-glucanotransferase are provided. Methods of using the compositions include the manufacture of oligosaccharides.Type: GrantFiled: July 22, 2021Date of Patent: January 30, 2024Assignee: DUPONT NUTRITION BIOSCIENCES APSInventor: Slavko Kralj
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Patent number: 11866743Abstract: Pharmaceutical formulations that can include at least one genetically modified OPH enzyme are provided. Methods for treating chemical warfare agent exposure are also provided. Modified biomolecules are also provided.Type: GrantFiled: May 13, 2021Date of Patent: January 9, 2024Assignee: TELEDYNE FLIR DETECTION, INC.Inventors: David Wilson, Jennifer L. Poole, Jeremy P. Walker
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Patent number: 11866748Abstract: The present invention relates to compositions comprising at least two polypeptides having mannanase activity as well as methods of producing and using the compositions. The compositions comprise in particular a first mannanase which is a glycoside hydrolase family 5 (GH5) mannanase and a second mannanase which a glycoside hydrolase family 26 (GH26) mannanase.Type: GrantFiled: October 23, 2018Date of Patent: January 9, 2024Assignee: Novozymes A/SInventors: Markus Klinger, Tine Hoff
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Patent number: 11859217Abstract: The present invention is directed to terminal deoxynucleotidyltransferase (TdT) variants that (i) comprise an amino acid sequence that is at least a specified percent identical to an indicated SEQ ID NOs and have at least one substitution at Q455 or at least Q455 plus at least one further substitution at G186, S248, T331, Q390, K394 or H466 (where positions are with respect to SEQ ID NO 1 and functionally equivalent positions in indicated SEQ ID NOs), (ii) are capable of template-free extension of a polynucleotide, and (iii) exhibit enhanced stability or enhanced efficiency in incorporating 3?-0-blocked nucleoside triphosphates into a polynucleotide. The invention is also directed to the use of these TdT variants for synthesizing polynucleotides of any predetermined sequence.Type: GrantFiled: November 13, 2019Date of Patent: January 2, 2024Assignee: DNA ScriptInventors: Elise Champion, Jéröme Loc'h, Mikhael Soskine, Elodie Sune
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Patent number: 11859223Abstract: A system and method for controlling metabolic enzymes or pathways in cells to produce a chemical above the levels of a wild-type strain is disclosed. The system utilizes cells, including yeasts, bacteria, and molds, having at least two genes capable of being controlled bi-directionally with light, where one gene is turned from off to on when exposed to light and another gene is turned from on to off when exposed to light, the two genes reversing when the light is turned off. Cells may utilize any number of sequences that benefit chemical production, including sequences that: encode for constitutive transcription of light-activated transcription factor fusions; encode for a metabolic enzyme; encode for a repressor; induce expression of metabolic enzymes; and an endogenous or exogenous activator expressed by a constitutive promoter, inducible promoter, or gene circuit.Type: GrantFiled: April 7, 2017Date of Patent: January 2, 2024Assignee: THE TRUSTEES OF PRINCETON UNIVERSITYInventors: Jose L. Avalos, Jared E. Toettcher, Evan M. Zhao
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Patent number: 11845968Abstract: The present invention provides engineered deoxyribose-phosphate aldolase polypeptides useful under industrial process conditions for the production of pharmaceutical and fine chemical compounds.Type: GrantFiled: February 4, 2022Date of Patent: December 19, 2023Assignee: Codexis, Inc.Inventors: Da Duan, Oscar Alvizo, Jovana Nazor, Harvinder Chagger Maniar, James Nicholas Riggins, Jonathan Vroom, Santhosh Sivaramakrishnan, Hao Yang, Anna Fryszkowska, Mark A. Huffman, Joshua N. Kolev, Iman Farasat, Agustina Rodriguez-Granillo, Deeptak Verma
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Patent number: 11827913Abstract: Variants of chymosin with improved milk-clotting properties are disclosed.Type: GrantFiled: January 7, 2022Date of Patent: November 28, 2023Assignee: Chr. Hansen A/SInventors: Johannes Maarten Van Den Brink, Jesper Langholm Jensen, Jonas Jacobsen, Martin Lund, Iben Jeppesen, Christian Jaeckel