Patents Examined by Yong D. Pak
  • Patent number: 11965185
    Abstract: Described herein are CAS12A mutants from Lachnospiraceae bacterium and methods for use thereof. These mutants have enhanced DNA cleavage activities at non-canonical TTTT protospacer adjacent motifs (PAM) compared to the wild-type enzyme.
    Type: Grant
    Filed: April 30, 2021
    Date of Patent: April 23, 2024
    Assignee: INTEGRATED DNA TECHNOLOGIES, INC.
    Inventors: Liyang Zhang, Christopher Anthony Vakulskas
  • Patent number: 11959113
    Abstract: The disclosure discloses a production process and application of fermented tapioca starch for baking, and belongs to the fields of starch deep processing and food processing and production. The disclosure develops a production method of the fermented tapioca starch for baking. The method includes simple steps and greatly shortens a process cycle. By using tapioca starch as a main raw material and adding a specific amount of carbon source and a specific strain, under the action of fermentation and illumination in cooperation, the structure of the starch is improved. By adding the fermented tapioca starch, the effects of increasing the size of gluten-free Mochi bread, increasing pores of the bread and improving the texture and taste of the bread are realized.
    Type: Grant
    Filed: December 1, 2020
    Date of Patent: April 16, 2024
    Assignee: JIANGNAN UNIVERSITY
    Inventors: Yan Hong, Qiaoting Qi, Zhengbiao Gu, Li Cheng, Zhaofeng Li, Caiming Li
  • Patent number: 11959106
    Abstract: The present invention relates to compositions, methods and use of a mixture of enzymes having DNase activity and an enzyme having hexosaminidase activity.
    Type: Grant
    Filed: July 11, 2022
    Date of Patent: April 16, 2024
    Assignee: Novozymes A/S
    Inventors: Rebecca Munk Vejborg, Klaus Gori, Lilian Eva Tang Baltsen
  • Patent number: 11952602
    Abstract: The present invention relates to polypeptide variants of porcine trypsin, to nucleic acid molecules encoding these variants, and to host cells comprising such nucleic acid molecules. It also relates to the use of these variants in methods for producing insulin. The invention further relates to the use of these variants as medicaments, as food ingredients, or as feed ingredients and to the use of these variants within a process of manufacturing a food ingredient or a feed ingredient.
    Type: Grant
    Filed: October 27, 2022
    Date of Patent: April 9, 2024
    Assignee: SANOFI-AVENTIS DEUTSCHLAND GMBH
    Inventors: Thomas Stillger, Sebastian Rissom, Claudia Feller, Andreas Vogel
  • Patent number: 11946036
    Abstract: The present invention discloses a bacterium and an obtaining method and application thereof. The bacterium has a property of coproducing 1,3-propanediol and D-lactic acid. Further, the bacterium is Klebsiella oxytoca, including Klebsiella oxytoca PDL-5 CCTCC M 2016185. The obtaining method of the bacterium may be to obtain the bacterium by directly screening wild bacteria that satisfy conditions from the environment or performing gene engineering modification to wild bacteria. The present invention has the advantages that the bacteria can coproduce 1,3-propanediol and D-lactic acid through fermentation, the molar conversion rate and the concentration of the two products are very high, the types of byproducts are few, the concentration is low, the product extraction process is simplified, the high-efficiency biological production of 1,3-propanediol and D-lactic acid can be realized, and the industrial application prospect is very great.
    Type: Grant
    Filed: February 14, 2022
    Date of Patent: April 2, 2024
    Assignee: Shanghai Jiao Tong University
    Inventors: Ping Xu, Bo Xin, Fei Tao, Yu Wang, Hongzhi Tang, Cuiqing Ma
  • Patent number: 11939610
    Abstract: This disclosure describes a novel, ready-to-use protease composition in the form of a film or pouch composition. The protease composition can be used for stabilizing a biological sample containing a nucleic acid molecule for storage or transportation. It allows quick removal of protein contamination in the biological sample, thus facilitating sample preparation for nucleic acid detection or extraction.
    Type: Grant
    Filed: September 16, 2021
    Date of Patent: March 26, 2024
    Assignee: NeoGeneStar LLC
    Inventors: Nancy Quan, Zheng Wang, Thor W. Nilsen
  • Patent number: 11932884
    Abstract: Some aspects of this disclosure provide strategies, systems, reagents, methods, and kits that are useful for the targeted editing of nucleic acids, including editing a single site within the genome of a cell or subject, e.g., within the human genome. In some embodiments, fusion proteins comprise a Gam protein, a napDNAbp, and a cytidine deaminase. In some embodiments, the fusion proteins further comprise a UGI domain. In some embodiments, methods for targeted nucleic acid editing are provided. In some embodiments, reagents and kits for the generation of targeted nucleic acid editing proteins, e.g., fusion proteins of a Gam protein, a cytidine deaminase and nucleic acid editing proteins or domains, are provided.
    Type: Grant
    Filed: March 21, 2022
    Date of Patent: March 19, 2024
    Assignee: President and Fellows of Harvard College
    Inventors: David R. Liu, Kevin Tianmeng Zhao, Yongjoo Kim
  • Patent number: 11932885
    Abstract: The present invention relates to the use of glutamine synthetase as a protein therapy (such as enzyme replacement protein therapy) for the treatment of hyperammonemia. In particular the invention relates to the systemic administration of glutamine synthetase. The glutamine synthetase may be provided in conjugated or fusion form, to increase its half-life in the circulation. Also provided is a pharmaceutical composition comprising glutamine synthetase. The invention also relates to the uses, methods, and compositions involving a combination of the glutamine synthetase protein and an ammonia lowering agent, such as a nitrogen scavenger.
    Type: Grant
    Filed: June 3, 2022
    Date of Patent: March 19, 2024
    Assignee: Thoeris GmbH
    Inventor: Tamara Nicolson
  • Patent number: 11926855
    Abstract: An enzyme composition containing a protease combination or a protease mixture having neutral metalloprotease and serine alkaline protease activity, and an amylase. Feed compositions, additives and formulations containing the enzyme composition in methods for improving digestibility of proteins in an animal diet or animal feed, as well as optimizing the nutritional value of an animal diet or animal feed.
    Type: Grant
    Filed: December 21, 2020
    Date of Patent: March 12, 2024
    Assignee: Kerry Group Services International Limited
    Inventors: Niall Higgins, Jacques Georis, Sara Llamas Moya, Nathan Marshall, Derek Carr, Rachel Maloney, Laura Guaras
  • Patent number: 11920171
    Abstract: The present disclosure describes genes and proteins of the coenzyme F430 synthetic pathway. The genes and proteins in the pathway find uses as isolated nucleic acids, transformation vectors, a transformation media, genetically modified cells, methods of modulating methanogenesis, methods of modulating methane oxidation, methods of making a tetrapyrrole compound, methods of oxidizing methane, methods of biogenic methane synthesis is provided, methods of assaying an organism for potential methanogenic or methanotrophic activity, and isolated proteins.
    Type: Grant
    Filed: June 10, 2020
    Date of Patent: March 5, 2024
    Assignee: Auburn University
    Inventor: Steven Mansoorabadi
  • Patent number: 11905534
    Abstract: Disclosed in the present invention is an L-glutamate dehydrogenase mutant, the sequence of the L-glutamate dehydrogenase mutant being a sequence in which amino acid residue A at position 175 in SEQ ID NO: 1 is mutated to be G, and amino acid residue V at position 386 is mutated to be an amino acid residue having less steric hindrance. Further disclosed in the present invention is an application of the described L-amino acid dehydrogenase mutant in the preparation of L-glufosinate-ammonium or a salt thereof. When the L-glutamate dehydrogenase mutant of the present invention is used to prepare L-glufosinate-ammonium or a salt thereof, compared to an L-glutamate dehydrogenase mutant in which only position 175 or 386 is mutated, the specific enzyme activity is higher. Therefore, the action efficiency of the enzyme is improved, reaction costs are reduced, and industrial production is facilitated.
    Type: Grant
    Filed: November 19, 2021
    Date of Patent: February 20, 2024
    Assignee: SHANGHAI QIZHOU ZIYUE BIOTECHNOLOGY CO., LTD
    Inventors: Zhenhua Tian, Zhanbing Cheng, Shaonan Ding, Qi Jiao, Wenxuan Xu, Yao Huang, Feng Jiang
  • Patent number: 11898174
    Abstract: The present invention provides engineered uridine phosphorylase (UP) enzymes, polypeptides having UP activity, and polynucleotides encoding these enzymes, as well as vectors and host cells comprising these polynucleotides and polypeptides. Methods for producing UP enzymes are also provided. The present invention further provides compositions comprising the UP enzymes and methods of using the engineered UP enzymes. The present invention finds particular use in the production of pharmaceutical compounds.
    Type: Grant
    Filed: December 17, 2021
    Date of Patent: February 13, 2024
    Assignee: Codexis, Inc.
    Inventors: Jonathan Vroom, Jessica Anna Hurtak, Anders Matthew Knight
  • Patent number: 11884940
    Abstract: The present application relates to methods to improve biomass or lipid production in a microorganism from one or more fatty acid and one or more simple carbon co-substrates. Produced lipids may include unsaturated C6-C24 fatty acids, alcohols, aldehydes, and acetates which may be useful as final products or precursors to insect pheromones, fragrances, flavors, and polymer intermediates. The application further relates to recombinant microorganisms modified for improved production of biomass or lipid, or improved lipid selectivity. Also provided are methods of producing one or more lipid using the recombinant microorganisms, as well as compositions comprising the recombinant microorganisms and/or optionally one or more of the product lipid.
    Type: Grant
    Filed: December 14, 2021
    Date of Patent: January 30, 2024
    Assignee: Provivi, Inc.
    Inventors: Effendi Leonard, Micah Sheppard, Thomas Heel, Kathryn Christina Wu
  • Patent number: 11884942
    Abstract: An isolated and/or purified ?-glucanotransferase from Exiguobacterium acetylicum, recombinantly engineered variants thereof, active fragments thereof, synthetic nucleic acids encoding the ?-glucanotransferase and variants thereof, host cells comprising the synthetic nucleic acids, and compositions comprising the ?-glucanotransferase are provided. Methods of using the compositions include the manufacture of oligosaccharides.
    Type: Grant
    Filed: July 22, 2021
    Date of Patent: January 30, 2024
    Assignee: DUPONT NUTRITION BIOSCIENCES APS
    Inventor: Slavko Kralj
  • Patent number: 11866743
    Abstract: Pharmaceutical formulations that can include at least one genetically modified OPH enzyme are provided. Methods for treating chemical warfare agent exposure are also provided. Modified biomolecules are also provided.
    Type: Grant
    Filed: May 13, 2021
    Date of Patent: January 9, 2024
    Assignee: TELEDYNE FLIR DETECTION, INC.
    Inventors: David Wilson, Jennifer L. Poole, Jeremy P. Walker
  • Patent number: 11866748
    Abstract: The present invention relates to compositions comprising at least two polypeptides having mannanase activity as well as methods of producing and using the compositions. The compositions comprise in particular a first mannanase which is a glycoside hydrolase family 5 (GH5) mannanase and a second mannanase which a glycoside hydrolase family 26 (GH26) mannanase.
    Type: Grant
    Filed: October 23, 2018
    Date of Patent: January 9, 2024
    Assignee: Novozymes A/S
    Inventors: Markus Klinger, Tine Hoff
  • Patent number: 11859217
    Abstract: The present invention is directed to terminal deoxynucleotidyltransferase (TdT) variants that (i) comprise an amino acid sequence that is at least a specified percent identical to an indicated SEQ ID NOs and have at least one substitution at Q455 or at least Q455 plus at least one further substitution at G186, S248, T331, Q390, K394 or H466 (where positions are with respect to SEQ ID NO 1 and functionally equivalent positions in indicated SEQ ID NOs), (ii) are capable of template-free extension of a polynucleotide, and (iii) exhibit enhanced stability or enhanced efficiency in incorporating 3?-0-blocked nucleoside triphosphates into a polynucleotide. The invention is also directed to the use of these TdT variants for synthesizing polynucleotides of any predetermined sequence.
    Type: Grant
    Filed: November 13, 2019
    Date of Patent: January 2, 2024
    Assignee: DNA Script
    Inventors: Elise Champion, Jéröme Loc'h, Mikhael Soskine, Elodie Sune
  • Patent number: 11859223
    Abstract: A system and method for controlling metabolic enzymes or pathways in cells to produce a chemical above the levels of a wild-type strain is disclosed. The system utilizes cells, including yeasts, bacteria, and molds, having at least two genes capable of being controlled bi-directionally with light, where one gene is turned from off to on when exposed to light and another gene is turned from on to off when exposed to light, the two genes reversing when the light is turned off. Cells may utilize any number of sequences that benefit chemical production, including sequences that: encode for constitutive transcription of light-activated transcription factor fusions; encode for a metabolic enzyme; encode for a repressor; induce expression of metabolic enzymes; and an endogenous or exogenous activator expressed by a constitutive promoter, inducible promoter, or gene circuit.
    Type: Grant
    Filed: April 7, 2017
    Date of Patent: January 2, 2024
    Assignee: THE TRUSTEES OF PRINCETON UNIVERSITY
    Inventors: Jose L. Avalos, Jared E. Toettcher, Evan M. Zhao
  • Patent number: 11845968
    Abstract: The present invention provides engineered deoxyribose-phosphate aldolase polypeptides useful under industrial process conditions for the production of pharmaceutical and fine chemical compounds.
    Type: Grant
    Filed: February 4, 2022
    Date of Patent: December 19, 2023
    Assignee: Codexis, Inc.
    Inventors: Da Duan, Oscar Alvizo, Jovana Nazor, Harvinder Chagger Maniar, James Nicholas Riggins, Jonathan Vroom, Santhosh Sivaramakrishnan, Hao Yang, Anna Fryszkowska, Mark A. Huffman, Joshua N. Kolev, Iman Farasat, Agustina Rodriguez-Granillo, Deeptak Verma
  • Patent number: 11827913
    Abstract: Variants of chymosin with improved milk-clotting properties are disclosed.
    Type: Grant
    Filed: January 7, 2022
    Date of Patent: November 28, 2023
    Assignee: Chr. Hansen A/S
    Inventors: Johannes Maarten Van Den Brink, Jesper Langholm Jensen, Jonas Jacobsen, Martin Lund, Iben Jeppesen, Christian Jaeckel