Patents Examined by Yong D. Pak
  • Patent number: 10301657
    Abstract: Modified or recombinant microorganisms are provided herein that can be used to produce one or more amino acids, including, for example, methionine or one or more methionine biosynthetic pathway-derived intermediates or one or more methionine-based products.
    Type: Grant
    Filed: June 16, 2016
    Date of Patent: May 28, 2019
    Assignee: MOgene Green Chemicals LLC
    Inventors: Abhay Kumar Singh, Himadri Pakrasi, Ganesh Murthy Kishore
  • Patent number: 10301654
    Abstract: Provided is a method of preparing cinnamaldehyde by using a recombinant microorganism.
    Type: Grant
    Filed: May 13, 2016
    Date of Patent: May 28, 2019
    Assignee: INTELLIGENT SYNTHETIC BIOLOGY CENTER
    Inventors: Ki Jun Jeong, Sun Chang Kim, Hyun Bae Bang, Yoon Hyeok Lee, Suk Chae Jung
  • Patent number: 10273491
    Abstract: Provided are a novel promoter and a method of producing a target product using the same.
    Type: Grant
    Filed: January 15, 2016
    Date of Patent: April 30, 2019
    Assignee: CJ CHEILJEDANG CORPORATION
    Inventors: Seung Bin Lee, Hyun Ae Bae, Ji Hye Lee, Young Lyeol Yang
  • Patent number: 10266813
    Abstract: Described herein are polymerase variants that are exonuclease deficient. Some variants retain the strand displacement capability comparable to the wild-type or parental polymerase. Some variants have a strand displacement capability that is improved relative to the wild-type or parental polymerase. The variants may have an extension rate that is greater than the wild-type or parental polymerase. The variants may have a waiting time that is less than the wild-type or parental polymerase.
    Type: Grant
    Filed: February 27, 2017
    Date of Patent: April 23, 2019
    Assignee: Genia Technologies, Inc.
    Inventors: Aruna Ayer, Arkadiusz Bibillo, Preethi Sarvabhowman, Dhruti Vasudev Dalal, Ilya Lederman, Eileen Thai
  • Patent number: 10260056
    Abstract: Provided herein is an ?-fucosidase that can cleave a conjugate comprising an N-glycan and a label where the label is added by amine reactive chemistry. The ?-fucosidase also has an accelerated reaction time using Schiff base labeled N-glycans compared with bovine kidney fucosidase. A reaction mix, enzyme mix and kit comprising the ?-fucosidase are provided, as well as a method for analyzing glycoproteins. The ?-fucosidase finds particular use in analyzing the N-glycans of therapeutic glycoproteins.
    Type: Grant
    Filed: February 12, 2018
    Date of Patent: April 16, 2019
    Assignee: New England Biolabs, Inc.
    Inventors: Christopher H. Taron, Saulius Vainauskas, Xiaofeng Shi
  • Patent number: 10240174
    Abstract: Host cells that are engineered to produce benzylisoquinoline alkaloid (BIAs) precursors, such as norcoclaurine (NC) and norlaudanosoline (NL), are provided. The host cells may have one or more engineered modifications selected from: a feedback inhibition alleviating mutation in a enzyme gene; a transcriptional modulation modification of a biosynthetic enzyme gene; an inactivating mutation in an enzyme; and a heterologous coding sequence. Also provided are methods of producing a BIA of interest or a precursor thereof using the host cells and compositions, e.g., kits, systems etc., that find use in methods of the invention.
    Type: Grant
    Filed: November 3, 2014
    Date of Patent: March 26, 2019
    Assignee: The Board of Trustees of the Leland Stanford Junior University
    Inventors: Michael Shareef Siddiqui, Christina D. Smolke
  • Patent number: 10240175
    Abstract: The present invention relates to host cells that produce compounds that are characterized as benzylisoquinolines, as well as select precursors and intermediates thereof. The host cells comprise one, two or more heterologous coding sequences wherein each of the heterologous coding sequences encodes an enzyme involved in the metabolic pathway of a benzylisoquinoline, or its precursors or intermediates from a starting compound. The invention also relates to methods of producing the benzylisoquinoline, as well as select precursors and intermediates thereof by culturing the host cells under culture conditions that promote expression of the enzymes that produce the benzylisoquinoline or precursors or intermediates thereof.
    Type: Grant
    Filed: March 23, 2016
    Date of Patent: March 26, 2019
    Assignee: California Institute of Technology
    Inventors: Christina D. Smolke, Kristy M. Hawkins
  • Patent number: 10240176
    Abstract: The present invention relates to host cells that produce compounds that are characterized as benzylisoquinolines, as well as select precursors and intermediates thereof. The host cells comprise one, two or more heterologous coding sequences wherein each of the heterologous coding sequences encodes an enzyme involved in the metabolic pathway of a benzylisoquinoline, or its precursors or intermediates from a starting compound. The invention also relates to methods of producing the benzylisoquinoline, as well as select precursors and intermediates thereof by culturing the host cells under culture conditions that promote expression of the enzymes that produce the benzylisoquinoline or precursors or intermediates thereof.
    Type: Grant
    Filed: April 26, 2016
    Date of Patent: March 26, 2019
    Assignee: California Institute of Technology
    Inventors: Christina D. Smolke, Kristy M. Hawkins
  • Patent number: 10233471
    Abstract: The invention relates to methods of preconditioning pretreated cellulosic material in the presence of a combination of phenol oxidizing enzyme and glucoamylase. The invention also relates to processes of producing sugars and fermentation products including a preconditioning step. Finally the invention relates to a composition suitable for preconditioning.
    Type: Grant
    Filed: May 15, 2014
    Date of Patent: March 19, 2019
    Assignee: Novozyme A/S
    Inventors: Xin Li, Brandon Emme, Lorraine Putnam, Mads Torry Smith
  • Patent number: 10233439
    Abstract: The present invention discloses a directionally modified glucosamine synthase mutant and its application. The amino acid sequence of the glucosamine synthase mutant is as shown in sequence list SEQ ID No. 1, and the nucleotide sequence is as shown in sequence list SEQ ID No. 2. The genetic engineering bacteria of glucosamine synthase is successfully constructed. In order to improve the tolerance of recombinant bacteria against glucosamine, the glucosamine synthase is directionally modified. A glucosamine synthase mutant is selected from the mutant library via high-throughput screening method, the amino acid changes in the mutant induces the spatial conformational change in the enzyme, so as enlarged the region where the enzyme and substrate combines, therefor the combination efficiency of the enzyme and the substrate is increased. The glucosamine synthase of the present invention has various advantages, such as rich in raw material of glucose, and a convenient subsequent extraction.
    Type: Grant
    Filed: June 5, 2017
    Date of Patent: March 19, 2019
    Assignees: Yangzhou Rixing Bio-Tech Co., Ltd, Jiangnan University
    Inventors: Jinsong Shi, Zhenghong Xu, Chao Zhang, Jinsong Gong, Heng Li, Zhenzhong Ding, Xiang Fang, Wanhong Zhang
  • Patent number: 10221403
    Abstract: The present invention provides a method of preparing zearalenone hydrolase, including the step of culturing a yeast cell carrying a gene encoding a zearalenone hydrolase in a medium to express a protein of the zearalenone hydrolase, wherein the medium contains 20 to 25% molasses by weight. This method provides a new strategy to efficiently prepare zearalenone hydrolase at low expenses.
    Type: Grant
    Filed: April 25, 2018
    Date of Patent: March 5, 2019
    Assignee: LIFE RAINBOW BIOTECH CO., LTD.
    Inventors: Ching-Kuo Yang, Yu-Hsiang Yu, Ya-Chieh Huang, Rou-Wan Liao
  • Patent number: 10221408
    Abstract: Provided herein are phenylalanine ammonia-lyase (PAL) variants produced by prokaryotes, wherein such prokaryotic PAL variant has a greater phenylalanine-converting activity and/or a reduced immunogenicity as compared to a wild-type PAL. Further provided are compositions of prokaryotic PAL and biologically active fragments, mutants, variants or analogs thereof, as well as methods for the production, purification, formulation, and use of such compositions for industrial and therapeutic purposes, e.g., treating hyperphenylalaninemia, including phenylketonuria, and other disorders, including cancer.
    Type: Grant
    Filed: April 15, 2016
    Date of Patent: March 5, 2019
    Assignee: BIOMARIN PHARMACEUTICAL INC.
    Inventors: Augustus O. Okhamafe, Sean M. Bell, G. Nick Zecherle, Kris Antonsen, Yanhong Zhang, Kieu Ly Tran, Paul A. Fitzpatrick, Emil D. Kakkis, Michel Claude Vellard, Daniel J. Wendt, Mubarack Muthalif
  • Patent number: 10202625
    Abstract: Host cells that are engineered to produce benzylisoquinoline alkaloid (BIAs) precursors, such as norcoclaurine (NC) and norlaudanosoline (NL), are provided. The host cells may have one or more engineered modifications selected from: a feedback inhibition alleviating mutation in a enzyme gene; a transcriptional modulation modification of a biosynthetic enzyme gene; an inactivating mutation in an enzyme; and a heterologous coding sequence. Also provided are methods of producing a BIA of interest or a precursor thereof using the host cells and compositions, e.g., kits, systems etc., that find use in methods of the invention.
    Type: Grant
    Filed: November 3, 2014
    Date of Patent: February 12, 2019
    Assignee: The Board of Trustees of the Leland Stanford Junior University
    Inventors: Michael Shareef Siddiqui, Christina D. Smolke
  • Patent number: 10202626
    Abstract: The present invention relates to host cells that produce compounds that are characterized as benzylisoquinolines, as well as select precursors and intermediates thereof. The host cells comprise one, two or more heterologous coding sequences wherein each of the heterologous coding sequences encodes an enzyme involved in the metabolic pathway of a benzylisoquinoline, or its precursors or intermediates from a starting compound. The invention also relates to methods of producing the benzylisoquinoline, as well as select precursors and intermediates thereof by culturing the host cells under culture conditions that promote expression of the enzymes that produce the benzylisoquinoline or precursors or intermediates thereof.
    Type: Grant
    Filed: March 23, 2016
    Date of Patent: February 12, 2019
    Assignee: California Institute of Technology
    Inventors: Christina D. Smolke, Kristy M. Hawkins
  • Patent number: 10196657
    Abstract: This document describes biochemical pathways for producing pimelic acid, 7-aminoheptanoic acid, 7-hydroxyheptanoic acid, heptamethylenediamine or 1,7-heptanediol by forming two terminal functional groups, comprised of carboxyl, amine or hydroxyl group, in a C7 aliphatic backbone substrate. These pathways, metabolic engineering and cultivation strategies described herein rely on enzymes or homologs accepting methyl ester shielded dicarboxylic acid substrates.
    Type: Grant
    Filed: December 23, 2013
    Date of Patent: February 5, 2019
    Assignee: INVISTA NORTH AMERICA S.A.R.L.
    Inventors: Paul S. Pearlman, Alex Van Eck Conradie, Changlin Chen, Adriana Leonora Botes
  • Patent number: 10174329
    Abstract: Methods for increasing the genetic stability of genetically enhanced microbial host cells capable of producing a compound of interest are disclosed.
    Type: Grant
    Filed: June 14, 2017
    Date of Patent: January 8, 2019
    Assignee: Algenol Biotech LLC
    Inventors: Ming-De Deng, Ulf Dühring, Frank Uliczka, Kimberly Lynn Anderson
  • Patent number: 10174302
    Abstract: The disclosure provides a modified protein that is a combination of (i) an L-asparaginase and (ii) one or more (poly)peptide(s), wherein the (poly)peptide consists solely of proline and alanine amino acid residues, and methods of preparation and use thereof.
    Type: Grant
    Filed: August 7, 2017
    Date of Patent: January 8, 2019
    Assignees: XL-protein GmbH, Jazz Pharmaceuticals Ireland Limited
    Inventors: Lars Friedrich, Anne O'Donnell
  • Patent number: 10167491
    Abstract: The present invention relates to methods for degrading or converting a cellulosic material, comprising: treating the cellulosic material with an enzyme composition in the presence of a polypeptide having catalase activity; and enzyme compositions used for degrading or converting a cellulosic material comprising one or more (e.g., several) enzymes having cellulolytic and/or hemicellulolytic activity and a polypeptide having catalase activity.
    Type: Grant
    Filed: December 19, 2017
    Date of Patent: January 1, 2019
    Assignee: Novozymes A/S
    Inventors: Hongzhi Huang, Haiyu Ren
  • Patent number: 10155934
    Abstract: The present invention pertains to an isolated P450 enzyme comprising or consisting of an amino acid sequence at least 80% identical to SEQ ID NO: 1, wherein said sequence comprises a threonine at position corresponding to position 225 and/or an aspartic acid mutation at position corresponding to position 289. The invention also concerns an isolated nucleic acid comprising a sequence encoding said enzyme, a vector comprising said nucleic acid, and a host cell containing said nucleic acid or said vector. Methods for preparing said enzyme and methods for producing steroid hormone precursors using the enzyme or the host cells featured in the invention are also provided.
    Type: Grant
    Filed: August 17, 2017
    Date of Patent: December 18, 2018
    Assignee: SANOFI
    Inventors: Marine Bertin, Bruno Dumas
  • Patent number: 10150953
    Abstract: The present invention relates to a method for preparing an expression vector encoding a well-tolerated and highly specific tailored recombinase, which tailored recombinase is capable of recombining asymmetric target sequences within the long terminal repeat (LTR) of proviral DNA of a plurality of retrovirus strains which may be inserted into the genome of a host cell, as well as to the obtained expression vector, cells transfected with these, expressed recombinase and pharmaceutical compositions comprising the expression vector, cells and/or recombinase. Pharmaceutical compositions are useful, e.g., in treatment and/or prevention of retrovirus infection, in particular, HIV infection. In particular, the invention relates to well-tolerated and highly specific tailored recombinases capable of combining asymmetric target sequences in a more than 90% of HIV-strains, thereby excising the HIV-1 sequences, and expression vectors encoding them.
    Type: Grant
    Filed: September 1, 2015
    Date of Patent: December 11, 2018
    Assignees: Heinrich-Pette-Institut Leibniz-Institut für Experimentelle Virologie-Stiftung bürgerlichen Rechts, Technische Universität Dresden
    Inventors: Joachim Hauber, Jan Chemnitz, Frank Buchholz, Janet Karpinski