Patents by Inventor Andrew Jamieson

Andrew Jamieson has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 7026462
    Abstract: Provided herein are a variety of methods and compositions for regulating angiogenesis, such methods and compositions being useful in a variety of applications where modulation of vascular formation is useful, including, but not limited to, treatments for ischemia and wound healing. Certain of the methods and compositions accomplish this by using various zinc finger proteins that bind to particular target sites in one or more VEGF genes. Nucleic acids encoding the zinc finger proteins are also disclosed. Methods for modulating the expression of one or more VEGF genes with the zinc finger proteins and nucleic acids are also disclosed. Such methods can also be utilized in a variety of therapeutic applications that involve the regulation of endothelial cell growth. Pharmaceutical compositions including the zinc finger proteins or nucleic acids encoding them are also provided.
    Type: Grant
    Filed: December 6, 2001
    Date of Patent: April 11, 2006
    Assignee: Sangamo BioSciences, Inc.
    Inventors: Edward Rebar, Andrew Jamieson, Qiang Liu, Pei-Qi Liu, Elizabeth J. Wolffe, Stephen P. Eisenberg, Eric Jarvis, Alan Wolffe
  • Publication number: 20060063231
    Abstract: Disclosed herein are methods and compositions for enhanced protein production and overexpression using engineered zinc finger proteins.
    Type: Application
    Filed: September 8, 2005
    Publication date: March 23, 2006
    Inventors: Xiao-Yong Li, Andrew Jamieson, Victor Bartsevich, Trevor Collingwood
  • Publication number: 20060024726
    Abstract: The specificity of binding of a zinc finger to a triplet or quadruplet nucleotide target subsite depends upon the location of the zinc finger in a multifinger protein and, hence, upon the location of its target subsite within a larger target sequence. The present disclosure provides zinc finger amino acid sequences for recognition of triplet target subsites having the nucleotide G in the 5?-most position of the subsite, that have been optimized with respect to the location of the subsite within the target site. Accordingly, the disclosure provides finger position-specific amino acid sequences for the recognition of GNN target subsites. This allows the construction of multi-finger zinc finger proteins with improved affinity and specificity for their target sequences, as well as enhanced biological activity.
    Type: Application
    Filed: August 11, 2005
    Publication date: February 2, 2006
    Inventors: Qiang Liu, Edward Rebar, Andrew Jamieson
  • Publication number: 20060019349
    Abstract: The specificity of binding of a zinc finger to a triplet or quadruplet nucleotide target subsite depends upon the location of the zinc finger in a multifinger protein and, hence, upon the location of its target subsite within a larger target sequence. The present disclosure provides zinc finger amino acid sequences for recognition of triplet target subsites having the nucleotide G in the 5?-most position of the subsite, that have been optimized with respect to the location of the subsite within the target site. Accordingly, the disclosure provides finger position-specific amino acid sequences for the recognition of GNN target subsites. This allows the construction of multi-finger zinc finger proteins with improved affinity and specificity for their target sequences, as well as enhanced biological activity.
    Type: Application
    Filed: September 12, 2005
    Publication date: January 26, 2006
    Inventors: Qiang Liu, Edward Rebar, Andrew Jamieson
  • Publication number: 20050267062
    Abstract: Provided herein are a variety of methods and compositions for regulating angiogenesis, such methods and compositions being useful in a variety of applications where modulation of vascular formation is useful, including, but not limited to, treatments for ischemia and wound healing. Certain of the methods and compositions accomplish this by using various zinc finger proteins that bind to particular target sites in one or more VEGF genes. Nucleic acids encoding the zinc finger proteins are also disclosed. Methods for modulating the expression of one or more VEGF genes with the zinc finger proteins and nucleic acids are also disclosed. Such methods can also be utilized in a variety of therapeutic applications that involve the regulation of endothelial cell growth. Pharmaceutical compositions including the zinc finger proteins or nucleic acids encoding them are also provided.
    Type: Application
    Filed: April 26, 2005
    Publication date: December 1, 2005
    Applicant: Sangamo BioSciences, Inc.
    Inventors: Edward Rebar, Andrew Jamieson, Qiang Liu, Pei-Qi Liu, Alan Wolffe, Stephen Eisenberg, Eric Jarvis
  • Publication number: 20050222925
    Abstract: A display device is disclosed which may be used in a mobile telephone or other article which is intended to make secure transactions such as financial transactions, as well as other personal transactions such as telephone calls. The device includes a display (24) for displaying information, a financial transaction controller (26) including a processor (28), a display driver (30) for driving the display (24) and a secure memory (32). The financial transaction controller allows the display section (24), and an input keypad (12), to operate under the control of the device to enable personal functions other than financial transactions to be performed.
    Type: Application
    Filed: May 7, 2003
    Publication date: October 6, 2005
    Inventor: Andrew Jamieson
  • Publication number: 20050160507
    Abstract: This invention relates to a new and distinct variety of strawberry (Fragaria ananassa) named ‘Cabot’ characterized by its few, small flowers, large calyx, large and light colored fruit, and resistance to red stele root. The invention is distinct from other varieties, but most similar to ‘Bounty’.
    Type: Application
    Filed: January 12, 2004
    Publication date: July 21, 2005
    Inventor: Andrew Jamieson
  • Publication number: 20050034201
    Abstract: This invention relates to a strawberry plant (Fragaria ananassa) named ‘Evangeline’ characterized by its large firm fruit and large flowers. The cultivar exhibits high yield when propagated in the field.
    Type: Application
    Filed: January 12, 2004
    Publication date: February 10, 2005
    Inventor: Andrew Jamieson
  • Patent number: 6794136
    Abstract: Disclosed herein are design methods for optimizing the specificity of a binding protein. The methods comprise iterative cycles of rational design, site selection, redesign and site selection of the redesigned molecule.
    Type: Grant
    Filed: November 20, 2000
    Date of Patent: September 21, 2004
    Assignee: Sangamo Biosciences, Inc.
    Inventors: Stephen P. Eisenberg, Qiang Liu, Andrew Jamieson, Edward Rebar
  • Patent number: 6785613
    Abstract: The invention provides criteria and methods for selecting optimum subsequence(s) from a target gene for targeting by a zinc finger protein. Some of the methods of target site selection seek to identify one or more target segments having a DNA motif containing one or more so-called D-able subsites having the sequence 5′NNGK3′. Other methods of the invention are directed to selection of target segments within target genes using a correspondence regime between different triplets of three bases and the three possible positions of a triplet within a nine-base site. In another aspect, the invention provides methods of designing zinc finger proteins that bind to a preselected target site. These methods can be used following the preselection of target sites according to the procedures and criteria described above. The methods of design use a database containing information about previously characterized zinc finger proteins.
    Type: Grant
    Filed: March 28, 2002
    Date of Patent: August 31, 2004
    Assignee: Sangamo Biosciences, Inc.
    Inventors: Stephen P. Eisenberg, Casey C. Case, George N. Cox, III, Andrew Jamieson, Edward J. Rebar
  • Publication number: 20040128717
    Abstract: Disclosed herein are modified plant zinc finger proteins; compositions comprising modified plant zinc finger proteins and methods of making and using modified plant zinc finger proteins. The modified plant zinc finger proteins, in contrast to naturally-occurring plant zinc finger proteins, have a binding specificity that is determined by tandem arrays of modular zinc finger binding units.
    Type: Application
    Filed: December 22, 2003
    Publication date: July 1, 2004
    Inventors: Andrew Jamieson, Guofu Li
  • Publication number: 20040091990
    Abstract: Disclosed herein are zinc finger proteins that bind to target sites in a plant gamma-tocopherol methyl transferase (GMT) gene; compositions comprising these GMT-targeted zinc finger proteins and methods of making and using such zinc finger proteins.
    Type: Application
    Filed: August 27, 2003
    Publication date: May 13, 2004
    Inventors: Guofu Li, Qiang Liu, Andrew Jamieson, Edward Rebar
  • Publication number: 20030233672
    Abstract: Disclosed herein are zinc finger proteins that bind to target sites in a plant gamma-tocopherol methyl transferase (GMT) gene; compositions comprising these GMT-targeted zinc finger proteins and methods of making and using such zinc finger proteins. Also disclosed are methods for modulating the alpha-tocopherol content in various plant organs, particularly seeds, in transgenic plants.
    Type: Application
    Filed: April 17, 2003
    Publication date: December 18, 2003
    Applicant: Sangamo Biosciences, Inc., a corporation
    Inventors: Guofu Li, Qiang Liu, Andrew Jamieson, Edward Rebar, Mylavarapu Venkatramesh
  • Publication number: 20030108880
    Abstract: Disclosed herein are compositions and method comprising non-canonical (e.g., non-C2H2) zinc finger proteins.
    Type: Application
    Filed: January 22, 2002
    Publication date: June 12, 2003
    Applicant: Sangamo BioSciences
    Inventors: Edward Rebar, Andrew Jamieson
  • Publication number: 20030105593
    Abstract: The invention provides criteria and methods for selecting optimum subsequence(s) from a target gene for targeting by a zinc finger protein. Some of the methods of target site selection seek to identify one or more target segments having a DNA motif containing one or more so-called D-able subsites having the sequence 5′NNGK3′. Other methods of the invention are directed to selection of target segments within target genes using a correspondence regime between different triplets of three bases and the three possible positions of a triplet within a nine-base site. In another aspect, the invention provides methods of designing zinc finger proteins that bind to a preselected target site. These methods can be used following the preselection of target sites according to the procedures and criteria described above. The methods of design use a database containing information about previously characterized zinc finger proteins.
    Type: Application
    Filed: March 28, 2002
    Publication date: June 5, 2003
    Applicant: Sangamo Biosciences, Inc.
    Inventors: Stephen P. Eisenberg, Casey C. Case, George N. Cox, Andrew Jamieson, Edward J. Rebar
  • Publication number: 20030092000
    Abstract: The invention provides criteria and methods for selecting optimum subsequence(s) from a target gene for targeting by a zinc finger protein. Some of the methods of target site selection seek to identify one or more target segments having a DNA motif containing one or more so-called D-able subsites having the sequence 5′NNGK3′. Other methods of the invention are directed to selection of target segments within target genes using a correspondence regime between different triplets of three bases and the three possible positions of a triplet within a nine-base site. In another aspect, the invention provides methods of designing zinc finger proteins that bind to a preselected target site. These methods can be used following the preselection of target sites according to the procedures and criteria described above. The methods of design use a database containing information about previously characterized zinc finger proteins.
    Type: Application
    Filed: April 2, 2001
    Publication date: May 15, 2003
    Inventors: Stephen Eisenberg, Casey Case, George Cox, Andrew Jamieson, Edward Rebar
  • Publication number: 20030044404
    Abstract: Provided herein are a variety of methods and compositions for regulating angiogenesis, such methods and compositions being useful in a variety of applications where modulation of vascular formation is useful, including, but not limited to, treatments for ischemia and wound healing. Certain of the methods and compositions accomplish this by using various zinc finger proteins that bind to particular target sites in one or more VEGF genes. Nucleic acids encoding the zinc finger proteins are also disclosed. Methods for modulating the expression of one or more VEGF genes with the zinc finger proteins and nucleic acids are also disclosed. Such methods can also be utilized in a variety of therapeutic applications that involve the regulation of endothelial cell growth. Pharmaceutical compositions including the zinc finger proteins or nucleic acids encoding them are also provided.
    Type: Application
    Filed: April 30, 2001
    Publication date: March 6, 2003
    Inventors: Edward Rebar, Andrew Jamieson, Qiang Liu, Pei-Qi Liu, Alan Wolffe, Stephen P. Eisenberg, Eric Jarvis
  • Publication number: 20030044957
    Abstract: Disclosed herein are modified plant zinc finger proteins; compositions comprising modified plant zinc finger proteins and methods of making and using modified plant zinc finger proteins. The modified plant zinc finger proteins, in contrast to naturally-occurring plant zinc finger proteins, have a binding specificity that is determined by tandem arrays of modular zinc finger binding units.
    Type: Application
    Filed: January 22, 2002
    Publication date: March 6, 2003
    Inventors: Andrew Jamieson, Guofu Li
  • Publication number: 20030021776
    Abstract: Provided herein are a variety of methods and compositions for regulating angiogenesis, such methods and compositions being useful in a variety of applications where modulation of vascular formation is useful, including, but not limited to, treatments for ischemia and wound healing. Certain of the methods and compositions accomplish this by using various zinc finger proteins that bind to particular target sites in one or more VEGF genes. Nucleic acids encoding the zinc finger proteins are also disclosed. Methods for modulating the expression of one or more VEGF genes with the zinc finger proteins and nucleic acids are also disclosed. Such methods can also be utilized in a variety of therapeutic applications that involve the regulation of endothelial cell growth. Pharmaceutical compositions including the zinc finger proteins or nucleic acids encoding them are also provided.
    Type: Application
    Filed: December 6, 2001
    Publication date: January 30, 2003
    Applicant: Sangamo BioSciences, Inc.
    Inventors: Edward Rebar, Andrew Jamieson, Qiang Liu, Pei-Qi Liu, Alan Wolffe, Stephen P. Eisenberg, Eric Jarvis
  • Patent number: 6453242
    Abstract: The invention provides criteria and methods for selecting optimum subsequence(s) from a target gene for targeting by a zinc finger protein. Some of the methods of target site selection seek to identify one or more target segments having a DNA motif containing one or more so-called D-able subsites having the sequence 5′NNGK3′. Other methods of the invention are directed to selection of target segments within target genes using a correspondence regime between different triplets of three bases and the three possible positions of a triplet within a nine-base site. In another aspect, the invention provides methods of designing zinc finger proteins that bind to a preselected target site. These methods can be used following the preselection of target sites according to the procedures and criteria described above. The methods of design use a database containing information about previously characterized zinc finger proteins.
    Type: Grant
    Filed: January 12, 1999
    Date of Patent: September 17, 2002
    Assignee: Sangamo Biosciences, Inc.
    Inventors: Stephen P. Eisenberg, Casey C. Case, George N. Cox, III, Andrew Jamieson, Edward J. Rebar