Patents by Inventor William Reid

William Reid has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 11959906
    Abstract: A time-ordered series of measurements of a polymer made during translocation of the polymer through a Nanopore are analysed. The measurements are dependent on the identity of k-mers in the Nanopore, a k-mer bring k polymer units of the polymer, where k is a positive integer. The method involves deriving, from the series of measurements, a feature vector of time-ordered features representing characteristics of the measurements; and determining similarity between the derived feature vector and at least one other feature vector.
    Type: Grant
    Filed: January 11, 2019
    Date of Patent: April 16, 2024
    Assignee: Oxford Nanopore Technologies PLC
    Inventors: Stuart William Reid, James Anthony Clarke, James White, Gavin Harper
  • Patent number: 11945258
    Abstract: An easy-to-use paint roller cleaning device with multiple cleaning members sized for interfacing with rollers and naps of various sizes while the user holds onto the device along a handle. The cleaning members have an opening encircled by a roller interface wall which squeezes tightly over the nap while its paint-scraping rim removes the paint or other liquid from the roller nap and the paint-guiding wall urges the liquid downward to exit the nap. The paint roll cleaner tool will scrape the entire length of the nap before clearing the tip of the nap farthest from the painting handle. The cleaning structures come in sizes suited for standard and mini rollers with a variety of naps including ¼ inch, ? inch, and ½ inch.
    Type: Grant
    Filed: March 11, 2022
    Date of Patent: April 2, 2024
    Assignee: Port86, LLC
    Inventors: Patrick A Williams, Kimm L. Reid
  • Patent number: 11921103
    Abstract: A sequence of polymer units in a polymer (3), eg. DNA, is estimated from at least one series of measurements related to the polymer, eg. ion current as a function of translocation through a nanopore (1), wherein the value of each measurement is dependent on a k-mer being a group of k polymer units (4). A probabilistic model, especially a hidden Markov model (HMM), is provided, comprising, for a set of possible k-mers: transition weightings representing the chances of transitions from origin k-mers to destination k-mers; and emission weightings in respect of each k-mer that represent the chances of observing given values of measurements for that k-mer. The series of measurements is analysed using an analytical technique, eg. Viterbi decoding, that refers to the model and estimates at least one estimated sequence of polymer units in the polymer based on the likelihood predicted by the model of the series of measurements being produced by sequences of polymer units.
    Type: Grant
    Filed: June 21, 2019
    Date of Patent: March 5, 2024
    Assignee: Oxford Nanopore Technologies PLC
    Inventors: Stuart William Reid, Gavin Harper, Clive Gavin Brown, James Anthony Clarke, Andrew John Heron
  • Patent number: 11898984
    Abstract: To form a layer separating two volumes of aqueous solution, there is used an apparatus comprising elements defining a chamber, the elements including a body of non-conductive material having formed therein at least one recess opening into the chamber, the recess containing an electrode. A pre-treatment coating of a hydrophobic fluid is applied to the body across the recess. Aqueous solution, having amphiphilic molecules added thereto, is flowed across the body to cover the recess so that aqueous solution is introduced into the recess from the chamber and a layer of the amphiphilic molecules forms across the recess separating a volume of aqueous solution introduced into the recess from the remaining volume of aqueous solution.
    Type: Grant
    Filed: November 22, 2019
    Date of Patent: February 13, 2024
    Inventors: Stuart William Reid, Terence Alan Reid, James Anthony Clarke, Steven Paul White, Gurdial Singh Sanghera
  • Publication number: 20230388115
    Abstract: A method for non-custodial backup of a secret (1021) by the owner of said secret, assisted by a multiplicity n of recovery agents, each having individual public keys and private keys, and the owner having a first value (1013), comprising providing the owner with a first computer program, which at rest will reside on a computer readable medium, configured to enroll the secret by computing a public data set (1023), as a function of the owner's first value, each of the n recovery agents' public keys (1011), and a nonce (1015). A method for recovery of the secret (1021) is also disclosed.
    Type: Application
    Filed: May 31, 2023
    Publication date: November 30, 2023
    Applicant: LokBlok, Inc.
    Inventor: William Reid Carlisle
  • Publication number: 20230167494
    Abstract: A biochemical analysis system analyses polymers by taking measurements of a polymer from a sensor element comprising a nanopore during translocation of the polymer through the nanopore. When a polymer has partially translocated, the series of measurements is analysed using reference data derived from a reference sequence to provide a measure of similarity. Responsive to the measure of similarity, the sensor element may be selectively operated to eject the polymer and thereby make the nanopore available to receive a further polymer. Where the biochemical analysis system comprises an array of sensor elements and is takes measurements from sensor elements selected in a multiplexed manner, responsive to the measure of similarity, the biochemical analysis system ceases taking measurements from the currently selected sensor element and to starts taking measurements from a newly selected sensor element.
    Type: Application
    Filed: June 28, 2022
    Publication date: June 1, 2023
    Applicant: Oxford Nanopore Technologies PLC
    Inventors: Stuart William Reid, Gavin Harper, Clive Gavin Brown, Daniel John Turner, Andrew John Heron, Christopher James Wright
  • Publication number: 20220349937
    Abstract: A verification probe system is configured to verify an automated test platform and includes: an integrated circuit test probe assembly; and a moveable platform configured to position the integrated circuit test probe assembly proximate one of more conductive pins included within a test socket assembly of the automated test platform.
    Type: Application
    Filed: April 30, 2021
    Publication date: November 3, 2022
    Inventors: WILLIAM REID, Aaren Lonks
  • Patent number: 11401549
    Abstract: A biochemical analysis system analyses polymers by taking measurements of a polymer from a sensor element comprising a nanopore during translocation of the polymer through the nanopore. When a polymer has partially translocated, the series of measurements is analysed using reference data derived from a reference sequence to provide a measure of similarity. Responsive to the measure of similarity, the sensor element may be selectively operated to eject the polymer and thereby make the nanopore available to receive a further polymer. Where the biochemical analysis system comprises an array of sensor elements and is takes measurements from sensor elements selected in a multiplexed manner, responsive to the measure of similarity, the biochemical analysis system ceases taking measurements from the currently selected sensor element and to starts taking measurements from a newly selected sensor element.
    Type: Grant
    Filed: May 12, 2020
    Date of Patent: August 2, 2022
    Assignee: Oxford Nanopore Technologies PLC
    Inventors: Stuart William Reid, Gavin Harper, Clive Gavin Brown, Daniel John Turner, Andrew John Heron, Christopher James Wright
  • Publication number: 20220213541
    Abstract: The invention resides in a method of determining a sequence of a target polymer, or part thereof, comprising polymer units comprising canonical and non-canonical polymer units. The method comprises taking a series of measurements of a signal relating to the target polymer wherein a measurement of the signal is dependent upon a plurality of polymer units, and wherein the polymer units of the target polymer modulate the signal, and wherein a non-canonical polymer unit modulates the signal differently from a corresponding canonical polymer unit. The series of measurements are analysed using a machine learning technique that attributes a measurement of a non-canonical polymer unit to being a measurement of a respective corresponding canonical polymer unit. The sequence of the target polymer, or part thereof, is determined from the analysed series of measurements. A non-canonical polymer unit identified from the analysis can be additionally or alternatively determined.
    Type: Application
    Filed: September 4, 2019
    Publication date: July 7, 2022
    Applicant: Oxford Nanopore Technologies Limited
    Inventors: Clive Gavin Brown, Timothy Lee Massingham, Stuart William Reid
  • Publication number: 20220064724
    Abstract: A target polynucleotide is expanded. In respect of each nucleotide in the target polynucleotide, the target polynucleotide comprises clock nucleotides and at least one signal nucleotide in a predetermined order. The clock nucleotides have a predetermined sequence common to each nucleotide in the target polynucleotide. The at least one signal nucleotide is characteristic of the identity of the respective nucleotide in the target polynucleotide. During translocation of the expanded polynucleotide through a nanopore, electrical measurements dependent on the polynucleotide within the pore are made, to derive an analysis signal. Clock signals derived from the clock nucleotides are identified. Relative to the positions of the identified clock signals, nucleotide signals derived from the least one signal nucleotide are derived to analyse the target polynucleotide.
    Type: Application
    Filed: July 7, 2021
    Publication date: March 3, 2022
    Applicant: Oxford Nanopore Technologies Ltd.
    Inventors: Stuart William Reid, Gavin Harper
  • Publication number: 20220059187
    Abstract: Provided herein, in some embodiments, are methods of determining whether a target nucleic acid comprises a particular barcode sequence.
    Type: Application
    Filed: August 6, 2021
    Publication date: February 24, 2022
    Applicant: Oxford Nanopore Technologies Limited
    Inventors: Stuart William Reid, Eoghan Donal Harrington
  • Patent number: 11085077
    Abstract: A target polynucleotide is expanded. In respect of each nucleotide in the target polynucleotide, the target polynucleotide comprises clock nucleotides and at least one signal nucleotide in a predetermined order. The clock nucleotides have a predetermined sequence common to each nucleotide in the target polynucleotide. The at least one signal nucleotide is characteristic of the identity of the respective nucleotide in the target polynucleotide. During translocation of the expanded polynucleotide through a nanopore, electrical measurements dependent on the polynucleotide within the pore are made, to derive an analysis signal. Clock signals derived from the clock nucleotides are identified. Relative to the positions of the identified clock signals, nucleotide signals derived from the least one signal nucleotide are derived to analyse the target polynucleotide.
    Type: Grant
    Filed: October 17, 2018
    Date of Patent: August 10, 2021
    Assignee: Oxford Nanopore Technologies Ltd.
    Inventors: Stuart William Reid, Gavin Harper
  • Patent number: 10994310
    Abstract: A method of eliminating microbes in an overflow space in a sink having a sink basin may include obtaining a liquid dispensing and effluent shielding container assembly including a splash guard including a splash guard shield and an injection nozzle carried by the splash guard shield, the injection nozzle having an injection nozzle bore and at least one injection opening in the injection nozzle, the at least one injection opening, disposed in fluid communication with the injection nozzle bore; inserting the injection nozzle of the liquid dispensing and effluent shielding container assembly in the at least one overflow opening in the sink basin until the splash guard substantially covers the at least one overflow opening; and expelling the antimicrobial or cleaning agent liquid through the injection nozzle and the at least one injection opening and into the overflow space in the sink basin of the sink, respectively.
    Type: Grant
    Filed: June 9, 2020
    Date of Patent: May 4, 2021
    Inventors: W. Reid Grimes, Marian D. Grimes, William Reid Grimes, Jr.
  • Publication number: 20210079460
    Abstract: A biochemical analysis system analyses polymers by taking measurements of a polymer from a sensor element comprising a nanopore during translocation of the polymer through the nanopore. When a polymer has partially translocated, the series of measurements is analysed using reference data derived from a reference sequence to provide a measure of similarity. Responsive to the measure of similarity, the sensor element may be selectively operated to eject the polymer and thereby make the nanopore available to receive a further polymer. Where the biochemical analysis system comprises an array of sensor elements and is takes measurements from sensor elements selected in a multiplexed manner, responsive to the measure of similarity, the biochemical analysis system ceases taking measurements from the currently selected sensor element and to starts taking measurements from a newly selected sensor element.
    Type: Application
    Filed: May 12, 2020
    Publication date: March 18, 2021
    Applicant: Oxford Nanopore Technologies Ltd.
    Inventors: Stuart William Reid, Gavin Harper, Clive Gavin Brown, Daniel John Turner, Andrew John Heron, Christopher James Wright
  • Patent number: 10792708
    Abstract: A liquid dispensing and effluent shielding container assembly includes a flexible container having a container interior and a splash guard including a splash guard shield carried by the container. The splash guard shield may have a shield opening disposed in fluid communication with the container interior of the container. An injection nozzle is carried by the splash guard shield. The injection nozzle has a injection nozzle bore disposed in fluid communication with the shield opening of the splash guard shield and at least one injection opening in the injection nozzle, the at least one injection opening disposed in fluid communication with the injection nozzle bore. A method of eliminating microbes in an overflow space in a sink is also disclosed.
    Type: Grant
    Filed: May 13, 2015
    Date of Patent: October 6, 2020
    Inventors: W. Reid Grimes, Marian D. Grimes, William Reid Grimes, Jr.
  • Publication number: 20200298285
    Abstract: A method of eliminating microbes in an overflow space in a sink having a sink basin and at least one overflow opening in the sink basin and communicating with the overflow space may include obtaining a liquid dispensing and effluent shielding container assembly including a flexible container having a container interior and a splash guard including a splash guard shield carried by the container and an injection nozzle carried by the splash guard shield, the injection nozzle having a injection nozzle bore disposed in fluid communication with the container interior of the container and at least one injection opening in the injection nozzle, the at least one injection opening disposed in fluid communication with the injection nozzle bore; placing an antimicrobial or cleaning agent liquid in the container interior of the container; inserting the injection nozzle of the liquid dispensing and effluent shielding container assembly in the at least one overflow opening in the sink basin until the splash guard substanti
    Type: Application
    Filed: June 9, 2020
    Publication date: September 24, 2020
    Inventors: W. Reid Grimes, Marian D. Grimes, William Reid Grimes, JR.
  • Patent number: 10689697
    Abstract: Analysis Of A Polymer A biochemical analysis system analyses polymers by taking measurements of a polymer from a sensor element comprising a nanopore during translocation of the polymer through the nanopore. When a polymer has partially translocated, the series of measurements is analysed using reference data derived from a reference sequence to provide a measure of similarity. Responsive to the measure of similarity, the sensor element may be selectively operated to eject the polymer and thereby make the nanopore available to receive a further polymer. Where the biochemical analysis system comprises an array of sensor elements and is takes measurements from sensor elements selected in a multiplexed manner, responsive to the measure of similarity, the biochemical analysis system ceases taking measurements from the currently selected sensor element and to starts taking measurements from a newly selected sensor element.
    Type: Grant
    Filed: October 16, 2015
    Date of Patent: June 23, 2020
    Assignee: Oxford Nanopore Technologies Ltd.
    Inventors: Stuart William Reid, Gavin Harper, Clive Gavin Brown, Daniel John Turner, Andrew John Heron, Christopher James Wright
  • Publication number: 20200080966
    Abstract: To form a layer separating two volumes of aqueous solution, there is used an apparatus comprising elements defining a chamber, the elements including a body of non-conductive material having formed therein at least one recess opening into the chamber, the recess containing an electrode. A pre-treatment coating of a hydrophobic fluid is applied to the body across the recess. Aqueous solution, having amphiphilic molecules added thereto, is flowed across the body to cover the recess so that aqueous solution is introduced into the recess from the chamber and a layer of the amphiphilic molecules forms across the recess separating a volume of aqueous solution introduced into the recess from the remaining volume of aqueous solution.
    Type: Application
    Filed: November 22, 2019
    Publication date: March 12, 2020
    Inventors: Stuart William Reid, Terence Alan Reid, James Anthony Clarke, Steven Paul White, Gurdial Singh Sanghera
  • Patent number: 10447486
    Abstract: A method by which a hardware security module can attest remotely to its measure of trust as determined by its security certifications and the Level of Assurance it can be relied on to support without the human witnessing elements that are currently used to validate this trust. In a further embodiment the Level of Assurance can be transported to a second hardware security module.
    Type: Grant
    Filed: July 19, 2018
    Date of Patent: October 15, 2019
    Assignee: SPYRUS, Inc.
    Inventors: Daniel Elvio Turissini, William Reid Carlisle, Burton George Tregub
  • Publication number: 20190310242
    Abstract: A sequence of polymer units in a polymer (3), eg. DNA, is estimated from at least one series of measurements related to the polymer, eg. ion current as a function of translocation through a nanopore (1), wherein the value of each measurement is dependent on a k-mer being a group of k polymer units (4). A probabilistic model, especially a hidden Markov model (HMM), is provided, comprising, for a set of possible k-mers: transition weightings representing the chances of transitions from origin k-mers to destination k-mers; and emission weightings in respect of each k-mer that represent the chances of observing given values of measurements for that k-mer. The series of measurements is analysed using an analytical technique, eg. Viterbi decoding, that refers to the model and estimates at least one estimated sequence of polymer units in the polymer based on the likelihood predicted by the model of the series of measurements being produced by sequences of polymer units.
    Type: Application
    Filed: June 21, 2019
    Publication date: October 10, 2019
    Applicant: Oxford Nanopore Technologies Ltd.
    Inventors: Stuart William Reid, Gavin Harper, Clive Brown, James Anthony Clarke, Andrew John Heron