Gel Filled Patents (Class 204/605)
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Patent number: 11701039Abstract: A point-of-care diagnostic system that includes a cartridge and a reader. The cartridge can contain a patient sample, such as a blood sample. The cartridge is inserted into the reader and the patient sample is analyzed. The reader contains various analysis systems, such as an electrophoresis detection system that uses electrophoresis testing to identify and quantify various components of the blood sample. The reader can process data from the various patient sample analysis to provide interpretative results indicative of a disorder, condition, disease and/or infection of the patient.Type: GrantFiled: July 15, 2019Date of Patent: July 18, 2023Assignee: HEMEX HEALTH, INC.Inventors: Peter Galen, Umut Gurkan, Arwa Fraiwan, Muhammad Noman Hasan, Daniel E. Grupp, Joshua King Hoyt, James Thorne, Brian T. Grimberg
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Patent number: 11619608Abstract: Provided herein is an electrophoresis separation medium comprising: (a) a non-crosslinked or sparsely cross-linked polymer or copolymer; (b) one or more denaturant compounds, in an amount sufficient to inhibit re-naturation of single stranded polynucleotides; (c) an aqueous solvent; (d) optionally, a wall-coating material suited to inhibition of electroosmotic flow; and (e) optionally, an organic water miscible solvent such as DMSO or acetonitrile, wherein the electrophoresis separation medium exhibits functional stability for at least seven days at 23° C. Also provided herein are sieving compositions, including polymer-based sieving compositions, for molecular sieving as well as related kits, devices and methods of use. Such compositions can be useful for separation of biomolecules such as nucleic acids, proteins, glycoproteins and glycans.Type: GrantFiled: May 22, 2018Date of Patent: April 4, 2023Inventors: Jen-Kuei Liu, Bharti Solanki, Hans Michael Wenz, Frank Mercer, Cevat Akin, Achim Karger, Annelise Barron, Scott Mack
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Patent number: 11371997Abstract: A sample, which is a mixture of glycans, is fluorescently labeled (S2). The sample is subsequently separated by microchip electrophoresis under a buffer solution with no lectin added as well as under multiple kinds of buffer solutions with different lectins respectively added, and the separated components are fluorescently detected (S3). A high-concentration gel which can produce a molecular-sieving effect is used as the buffer solution. Multiple electropherograms are created from the detection results (S4). A glycan having a lectin specifically attached is delayed during its migration in the buffer solution, so that a peak corresponding to this glycan will effectively disappear. Accordingly, based on the kinds of lectins and the presence/absence of a peak on each of the electropherograms, the structure of each glycan in the sample is estimated and the glycan is identified (S5).Type: GrantFiled: February 27, 2019Date of Patent: June 28, 2022Assignee: SHIMADZU CORPORATIONInventor: Mitsuhiro Kinoshita
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Patent number: 11073507Abstract: Devices for controlling the capture, trapping, and transport of macromolecules include at least one fluidic transport nanochannel that intersects and is in fluid communication with at least one transverse nanochannel with (shallow) regions and/or with integrated transverse electrodes that enable fine control of molecule transport dynamics and facilitates analyses of interest, e.g., molecular identification, length determination, localized (probe) mapping and the like.Type: GrantFiled: February 22, 2019Date of Patent: July 27, 2021Assignee: The University of North Carolina at Chapel HillInventors: John Michael Ramsey, Laurent Menard
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Patent number: 10060903Abstract: A method of exporting measurements of a nanopore sensor on a nanopore based sequencing chip is disclosed. An electrical characteristic associated with the nanopore sensor is measured. The electrical characteristic associated with the nanopore sensor is processed. A summary for the electrical characteristic and one or more previous electrical characteristics is determined. The summary for the electrical characteristic and the one or more previous electrical characteristics are exported. Determining the summary includes determining that the electrical characteristic and at least a portion of the one or more previous electrical characteristics correspond to a base call event at the nanopore sensor. The summary represents the electrical characteristic and the at least a portion of the one or more previous electrical characteristics.Type: GrantFiled: November 5, 2014Date of Patent: August 28, 2018Assignee: Genia Technologies, Inc.Inventors: Roger J. A. Chen, Hui Tian, Santiago Fernandez-Gomez
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Patent number: 9409357Abstract: Embodiments of the present invention provide devices, systems, and methods for microscale isoelectric fractionation. Analytes in a sample may be isolated according to their isoelectric point within a fractionation microchannel. A microfluidic device according to an embodiment of the invention includes a substrate at least partially defining a fractionation microchannel. The fractionation microchannel has at least one cross-sectional dimension equal to or less than 1 mm. A plurality of membranes of different pHs are disposed in the microchannel. Analytes having an isoelectric point between the pH of the membranes may be collected in a region of the fractionation channel between the first and second membranes through isoelectric fractionation.Type: GrantFiled: January 23, 2013Date of Patent: August 9, 2016Assignee: Sandia CorporationInventors: Gregory J. Sommer, Anson V. Hatch, Ying-Chih Wang, Anup K. Singh
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Patent number: 9140666Abstract: The invention is an improved multiplex capillary electrophoresis instrument or module with at least four and preferably six user-accessible vertically stacked drawers. An x-z stage moves samples from the user accessible drawers to the capillary array for analysis. A computer program allows users to add capillary electrophoresis jobs to a queue corresponding to the analysis of rows or plates of samples without stopping or interrupting runs in progress.Type: GrantFiled: May 14, 2012Date of Patent: September 22, 2015Assignee: Advanced Analytical Technologies, Inc.Inventors: Bruce R. Boeke, Martin Chris Foster, Thomas J. Kurt, Scott Stueckradt
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Publication number: 20150122656Abstract: A mass separation device includes a transparent substrate and a plurality of small diameter cylindrically shaped orifices in the transparent substrate. The small diameter cylindrically shaped orifices include smooth wall surfaces and are not tapered. The small diameter cylindrically shaped orifices are drilled by photoacoustic compression and are clean and sharp and do not have ejecta mounds surrounding the orifice on the surface of the transparent substrate. The small diameter cylindrically shaped orifices in said transparent substrate are less than or equal to 1 ?m in diameter. The transparent substrate is glass and preferably is borosilicate glass.Type: ApplicationFiled: November 3, 2014Publication date: May 7, 2015Applicant: ROFIN-SINAR TECHNOLOGIES INC.Inventor: S. ABBAS HOSSEINI
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Publication number: 20150090595Abstract: A fitting (200) for providing a fluid connection between a capillary (202) and a fluidic conduit (204) of a fluidic component (30), the fitting (200) comprising a male piece (240) and a female piece (250) for connection with the male piece (240), wherein the male piece (240) comprises a housing (252) with a capillary reception (212) configured for receiving the capillary (202), wherein a part of the capillary (202) being received in the capillary reception (212) is circumferentially covered by a sleeve (214), an elastic biasing mechanism (206) being arranged at least partially within the housing (252), being configured for biasing the capillary (202) against the female piece (250) and being supported by the sleeve (214), and a locking mechanism (208) being arranged at least partially within the housing (252) and being configured for locking the capillary (202) to the fitting (200).Type: ApplicationFiled: November 15, 2012Publication date: April 2, 2015Applicant: aGILENT TECHNOLOGIES , INC.Inventors: Claus Lueth, Darijo Zeko
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Publication number: 20150001080Abstract: Embodiments of an electrophoresis device and methods for using the same in analyte separation applications are provided. Certain embodiments of the present disclosure include microfluidic devices having a single electrophoretic separation channel containing a separation medium. Systems according to embodiments of the present disclosure are configured to monitor analyte fronts moving through the electrophoretic separation channel in order to detect differentially migrating analytes, i.e., the systems are configured for moving boundary electrophoresis (MBE).Type: ApplicationFiled: February 1, 2013Publication date: January 1, 2015Inventors: Amy E. Herr, Todd Duncombe
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Publication number: 20140332382Abstract: Microfluidic devices and methods for using the same are provided. Embodiments include microfluidic devices that have a first separation region configured to separate a sample along a first directional axis based on a first property, and a second separation region in fluid communication with the first separation region and configured to separate the sample along a second directional axis based on a second property. Also provided are methods of using the devices as well as systems and kits that include the devices. The devices, systems and methods find use in a variety of different applications, including diagnostic and validation assays.Type: ApplicationFiled: May 9, 2014Publication date: November 13, 2014Inventors: Amy E. Herr, Augusto Tentori
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Publication number: 20140332383Abstract: Provided are devices that include a support, a free-standing polymeric separation medium associated with the support and configured to separate a sample along a directional axis, and a sample-loading element associated with the polymeric separation medium. Systems that include the devices, as well as methods of using the devices, are also provided. Embodiments of the present disclosure find use in a variety of different applications, including detecting whether an analyte is present in a fluid sample.Type: ApplicationFiled: May 6, 2014Publication date: November 13, 2014Inventors: Amy E. Herr, Todd Duncombe
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Publication number: 20140227772Abstract: The present invention relates to an immunoaffinity device for capturing one or more analytes present at high or low concentrations in simple or complex matrices. The device is designed as an integrated modular unit and connected to capillary electrophoresis or liquid chromatography for the isolation, enrichment, separation and identification of polymeric macromolecules, primarily protein biomarkers. The integrated modular unit includes an analyte-concentrator-microreaction device connected to a modified cartridge-cassette.Type: ApplicationFiled: April 22, 2014Publication date: August 14, 2014Inventor: Norberto A. GUZMAN
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Patent number: 8784631Abstract: Disclosed herein is a composition of a separation medium and method of its use for electrophoresis in bare channels, either capillaries or chips, with suppressed electroosmotic flow, wherein various forms of boric acid are adsorbed on the wall of said separation channel, efficiently suppressing zeta potential of the wall of said bare channel. A composition of a sieving separation medium for electrophoresis of DNA is disclosed. A composition of a sieving separation medium for electrophoretic size separation of proteins by SDS CSE is also disclosed. A composition of a separation medium for capillary electrophoresis without sieving is also disclosed.Type: GrantFiled: January 1, 2012Date of Patent: July 22, 2014Inventor: Vladislav Dolnik
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Patent number: 8685220Abstract: The invention provides a capillary electrophoresis apparatus which can improve the operability and measuring speed. According to the invention, a sensor for identifying the type of sample containers is fixed at the position away from a capillary anode electrode. The sensor is made to be closer to the sample containers by moving a moving stage so that the sample containers disposed on the moving stage can be identified by the sensor. A fixing apparatus for fixing at least a pair of sample containers is provided on the moving stage.Type: GrantFiled: July 26, 2012Date of Patent: April 1, 2014Assignee: Hitachi High-Technologies CorporationInventors: Takeshi Ohura, Ryoji Inaba, Yoshitaka Kodama, Hiromi Yamashita, Manabu Akiba, Tomohiro Shoji
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Patent number: 8603833Abstract: The present invention provides germania-silica-based sol-gel monoliths that form the solid-phase material for extraction, isolation, preconcentration, and separation of analytes. In one embodiment, the germania-silica-based sol-gel monolith can be used to coat surfaces of the inner walls of extraction and chromatographic columns. In a preferred embodiment, the sol-gel germania-silica monolith of the present invention is formed from hydrolysis and polycondensation of precursors comprising tetraethoxygermane, tetramethoxysilane, and polyethylene glycol. Also provided are methods of preparing the germania-silica-based sol-gel monolith of the present invention.Type: GrantFiled: June 3, 2011Date of Patent: December 10, 2013Assignee: University of South FloridaInventors: Abdul Malik, Erica B. Turner, Scott S. Segro
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Patent number: 8585884Abstract: Disclosed herein is an apparatus for the separation of proteins, comprising a capillary isoelectric focusing unit (2) for primarily separating protein samples on the basis of pI; and a hollow fiber flow field flow fractionation unit (4), connected to one side of the capillary isoelectric focusing unit (2), for secondarily separating the protein samples. The apparatus allows proteins to be separated on the basis of pI and molecular weight without denaturation and can further be applied for the identification of proteins in conjunction with nanoflow liquid chromatography-electrospray ionization-tandem mass spectrometry after enzymatic digestion of the protein fractions.Type: GrantFiled: January 17, 2007Date of Patent: November 19, 2013Assignee: Industry-Academic Cooperation Foundation, Yonsei UniversityInventors: Myeong Hee Moon, Duk Jin Kang
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Publication number: 20130277218Abstract: Devices and methods are provided for performing droplet-based solid phase processing steps on a digital microfluidic device. A solid phase material, which may be a porous solid phase material such as a porous polymer monolith is formed or located on a digital microfluidic element. The solid phase may be formed by an in-situ method in which the digital microfluidic array is actuated to transport a droplet of solid phase pre-cursor solution to a selected element on the array, and subsequently processed to form a solid phase on the array element. The integration of a solid phase material with a digital microfluidic array enables a wide range of applications including solid phase extraction and sample concentration.Type: ApplicationFiled: October 3, 2011Publication date: October 24, 2013Applicant: THE GOVERNING COUNCIL OF THE UNIVERSITY OF TORONTOInventors: Jared M. Mudrik, Hao Yang, Aaron R. Wheeler
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Publication number: 20130248366Abstract: A method of amplifying nucleic acid includes providing a microfluidic device having a space therein. The space is filled with a gel medium. Reagents for carrying out a PCR reaction are supported within the matrix of the gel medium within the space. A nucleic acid containing sample is brought into contact with the gel medium. The sample having whole cells or cell lysate without any prior separation of the nucleic acid from other components of the cells. PCR amplification of nucleic acid from the sample is performed in the space using the PCR reagents.Type: ApplicationFiled: September 21, 2011Publication date: September 26, 2013Applicant: THE UNIVERSITY OF HULLInventors: Stephen John Haswell, Kirsty Jane Shaw, Peter Docker
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Publication number: 20130213811Abstract: Systems and methods are provided for integrating the electrophoresis and blotting of samples. A capillary electrophoresis and blotting system allows concomitant electrophoretic separation and blotting to provide a rapid and simplified process. A microfluidic electrophoresis and blotting system provides electrophoretic separation in a microfluidic channel followed by electroblotting from the microfluidic channel to also provide a rapid and simplified process. These systems and methods can be used to assay smaller amounts of sample in less time than conventional processes, including conventional Western blotting techniques.Type: ApplicationFiled: August 23, 2012Publication date: August 22, 2013Applicant: THE REGENTS OF THE UNIVERSITY OF MICHIGANInventors: Robert Kennedy, Gwendolyn Anderson
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Patent number: 8512537Abstract: Various embodiments provide, for example, buffer compositions and/or sieving formulations useful in connection with electrophoresis instruments, such as capillary electrophoresis (CE) devices. In various embodiments, a buffer composition can include Bis-Tris, TAPS and/or TAPSO, and, optionally, a chelating agent, such as EDTA. Methods of separating samples containing bio-molecules, such as DNA or RNA, are also described.Type: GrantFiled: January 28, 2011Date of Patent: August 20, 2013Assignee: Applied Biosystems, LLCInventors: Kevin J. Hacker, Karl O. Voss
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Patent number: 8500980Abstract: A cost-effective multi-channel capillary gel-electrophoresis system for highly efficient, nucleic acid-based analysis, in particular HLA SSP (Human Leukocyte Antigen Sequence Specific Primer) typing applications. Twelve DNA samples are automatically injected, electrophoretically separated, detected and analyzed simultaneously by using a multiple usage and disposable multi-capillary gel-cartridge. Using commercially available DNA size markers as indicators, the system provides high resolving power with 12-channel separations in less than 1.5 minutes. The system can hold a total of 96 samples in a PCR plate that can automatically be analyzed within 25 minutes for a full plate of the HLA SSP kits.Type: GrantFiled: October 24, 2007Date of Patent: August 6, 2013Assignee: Qiagen Sciences, LLCInventors: Varouj Amirkhanian, Ming-Sun Liu
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Publication number: 20130078624Abstract: Systems and methods are provided for sample processing. A device may be provided, capable of receiving the sample, and performing one or more of a sample preparation, sample assay, and detection step. The device may be capable of performing multiple assays. The device may comprise one or more modules that may be capable of performing one or more of a sample preparation, sample assay, and detection step. The device may be capable of performing the steps using a small volume of sample.Type: ApplicationFiled: September 26, 2011Publication date: March 28, 2013Applicant: Theranos, Inc., a Delaware CorporationInventors: Elizabeth Holmes, Sunny Balwani
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Publication number: 20130078625Abstract: Systems and methods are provided for sample processing. A device may be provided, capable of receiving the sample, and performing one or more of a sample preparation, sample assay, and detection step. The device may be capable of performing multiple assays. The device may comprise one or more modules that may be capable of performing one or more of a sample preparation, sample assay, and detection step. The device may be capable of performing the steps using a small volume of sample.Type: ApplicationFiled: September 26, 2011Publication date: March 28, 2013Applicant: Theranos, Inc., a Delaware CorporationInventors: Elizabeth Holmes, Joy Roy
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Patent number: 8366900Abstract: The invention provides compositions, methods and kits for high speed, high resolution of analytes by capillary electrophoresis starting with uncoated capillaries. The compositions comprise a sieving component, comprising a non-crosslinked acrylamide polymer, and a surface interaction component, comprising at least one uncharged and non-crosslinked water-soluble silica-adsorbing polymer. Methods for employing the novel compositions in capillary electrophoresis are provided. Kits comprising the novel compositions for use in the novel methods are also provided.Type: GrantFiled: March 16, 2010Date of Patent: February 5, 2013Assignee: Applied Biosystems, LLCInventors: Karl O. Voss, Aldrich N. K. Lau
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Patent number: 8349161Abstract: Bubbles can be removed regardless of an individual difference of a pump to fill an electrophoresis medium into a capillary. Of flow passages formed between an inner side surface of a container for accommodating the electrophoresis medium and a side surface of a plunger, one of the flow passages causing an electrophoresis medium to be easily stagnant is formed to have the cross-sectional area larger than the cross-sectional area of the other flow passage on the opposite side. In other words, the flow passage portion causing the electrophoresis medium to be easily stagnant is formed in such a manner as to increase a flow amount of the electrophoresis medium. This can eliminate a region having an extremely small amount of electrophoresis medium flow in the pump.Type: GrantFiled: April 6, 2010Date of Patent: January 8, 2013Assignee: Hitachi High-Technologies CorporationInventors: Takashi Gomi, Ryoji Inaba, Taro Nakazawa, Takeshi Ohura, Mari Kotoura
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Patent number: 8329016Abstract: Disclosed is a novel microfluidic device enabling on-chip implementation of a two-dimensional separation methodology. Previously disclosed microscale immobilized pH gradients (IPG) are combined with perpendicular polyacrylamide gel electrophoresis (PAGE) microchannels to achieve orthogonal separations of biological samples. Device modifications enable inclusion of sodium dodecyl sulfate (SDS) in the second dimension. The device can be fabricated to use either continuous IPG gels, or the microscale isoelectric fractionation membranes we have also previously disclosed, for the first dimension. The invention represents the first all-gel two-dimensional separation microdevice, with significantly higher resolution power over existing devices.Type: GrantFiled: August 31, 2009Date of Patent: December 11, 2012Assignee: Sandia CorporationInventors: Gregory J. Sommer, Anson V. Hatch, Anup K. Singh, Ying-Chih Wang
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Publication number: 20120285832Abstract: The present invention relates to an immunoaffinity device for capturing one or more analytes present at high or low concentrations in simple or complex matrices. The device is designed as an integrated modular unit and connected to capillary electrophoresis or liquid chromatography for the isolation, enrichment, separation and identification of polymeric macromolecules, primarily protein biomarkers. The integrated modular unit includes an analyte-concentrator-microreaction device connected to a modified cartridge-cassette.Type: ApplicationFiled: June 4, 2012Publication date: November 15, 2012Inventor: Norberto A. GUZMAN
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Publication number: 20120267246Abstract: The present invention relates to novel methods and apparatus for improving the sensitivity of capillary zone electrophoresis (CZE). The invention particularly concerns devices comprising a channel that contains an in-line sol-gel column to concentrate samples being subjected to capillary zone electrophoresis, and the use of such devices to enhance the sensitivity of capillary zone electrophoresis.Type: ApplicationFiled: April 20, 2012Publication date: October 25, 2012Inventors: Chitra Kumari Ratnayake, Michael Paul Henry
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Patent number: 8293083Abstract: Provided are fabrication, characterization and application of a nanodisk electrode, a nanopore electrode and a nanopore membrane. These three nanostructures share common fabrication steps. In one embodiment, the fabrication of a disk electrode involves sealing a sharpened internal signal transduction element (“ISTE”) into a substrate, followed by polishing of the substrate until a nanometer-sized disk of the ISTE is exposed. The fabrication of a nanopore electrode is accomplished by etching the nanodisk electrode to create a pore in the substrate, with the remaining ISTE comprising the pore base. Complete removal of the ISTE yields a nanopore membrane, in which a conical shaped pore is embedded in a thin membrane of the substrate.Type: GrantFiled: November 18, 2010Date of Patent: October 23, 2012Assignee: University of Utah Research FoundationInventors: Henry S White, Bo Zhang, Ryan J White, Eric N Ervin, Gangli Wang
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Patent number: 8252162Abstract: The invention provides a capillary electrophoresis apparatus which can improve the operability and measuring speed. According to the invention, a sensor for identifying the type of sample containers is fixed at the position away from a capillary anode electrode. The sensor is made to be closer to the sample containers by moving a moving stage so that the sample containers disposed on the moving stage can be identified by the sensor. A fixing apparatus for fixing at least a pair of sample containers is provided on the moving stage.Type: GrantFiled: December 24, 2008Date of Patent: August 28, 2012Assignee: Hitachi High-Technologies CorporationInventors: Takeshi Ohura, Ryoji Inaba, Yoshitaka Kodama, Hiromi Yamashita, Manabu Akiba, Tomohiro Shoji
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Patent number: 8241476Abstract: A novel on-line method is presented for the extraction and preconcentration of amino acids using a sol-gel coated column coupled to a conventional UV/vis detector. Extraction, stacking and focusing techniques are used in the preconcentration procedures. Sol-gel coatings are created by using N-Octadecyldimethyl[3(trimethoxysilyl)proply]ammonium chloride (C18-TMS) in the coating sol solutions. The resulting sol-gel coating carries a positive charge. For extraction, the pH of the samples is properly adjusted to impart a net negative charge to amino acids. A long plug of the sample is then passed through the sol-gel coated capillary to facilitate extraction via electrostatic interaction between the positively charged sol-gel coating and the negatively charged amino acid molecules. The focusing of the extracted amino acids is accomplished through desorption of the extracted amino acid molecules carried out by local pH change. The described procedure provides 150,000-fold enrichment effect for alanine.Type: GrantFiled: May 14, 2008Date of Patent: August 14, 2012Assignee: University of South FloridaInventors: Abdul Malik, Wen Li, David P. Fries
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Patent number: 8221607Abstract: The invention provides compositions, methods and kits for high speed, high resolution of analytes by capillary electrophoresis starting with uncoated capillaries. The compositions comprise a sieving component, comprising a non-crosslinked acrylamide polymer, and a surface interaction component, comprising at least one uncharged and non-crosslinked water-soluble silica-adsorbing polymer. Methods for employing the novel compositions in capillary electrophoresis are provided. Kits comprising the novel compositions for use in the novel methods are also provided.Type: GrantFiled: March 5, 2004Date of Patent: July 17, 2012Assignee: Applied Biosystems, LLCInventors: Karl O. Voss, Aldrich N. K. Lau
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Patent number: 8182746Abstract: An electrophoresis apparatus is generally disclosed for sequentially analyzing a single sample or multiple samples having one or more analytes in high or low concentrations. The apparatus comprises a relatively large-bore transport capillary which intersects with a plurality of small-bore separation capillaries and includes a valve system. Analyte concentrators, having antibody-specific (or related affinity) chemistries, are stationed at the respective intersections of the transport capillary and separation capillaries to bind one or more analytes of interest. The apparatus allows the performance of two or more dimensions for the optimal separation of analytes. The apparatus may also include a plurality of valves surrounding each of the analyte concentrators to localize each of the concentrators to improve the binding of one or more analytes of interest.Type: GrantFiled: October 31, 2007Date of Patent: May 22, 2012Assignee: Princeton Biochemicals, Inc.Inventor: Norberto A. Guzman
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Patent number: 8163152Abstract: A cost-effective multi-channel capillary gel-electrophoresis system for highly efficient, high speed, high throughput, carbohydrate analysis. In one aspect of the present invention, a high-performance capillary electrophoresis analyzer system has been optimized for carbohydrate analysis application. The system uses a multiplexed/time-staggered fluorescence type detection mechanism, with an integrated fiber optic array-based technology and a novel disposable gel-cartridge. Twelve carbohydrate samples are automatically injected, electrophoretically separated, detected and analyzed simultaneously by using a multiple usage and disposable multi-capillary gel-cartridge. Using commercially available labeling agent such as APTS (representing 8-Aminopyrene-1,3,6-trisulfonic acid, trisodium salt) as an indicator, the capillary electrophoresis-based carbohydrate system/analyzer provides high resolving power in 2-15 minutes of separations.Type: GrantFiled: November 9, 2007Date of Patent: April 24, 2012Assignee: Qiagen Sciences, LLCInventors: Varouj Amirkhanian, Ming-Sun Liu, Andras Guttman
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Publication number: 20120091005Abstract: Methods, systems, and compounds for detecting modified nucleic acid bases are disclosed and described. The methods provide for detecting a nucleic acid lesion and can include directing a nucleic acid adduct into a channel, wherein the nucleic acid adduct includes a nucleic acid having a lesion and a current modulating compound coupled to the nucleic acid at the lesion (110), and measuring a change in current through the channel in response to the current modulating compound to detect the lesion (112). The method can optionally include forming the nucleic acid adduct. Also provided is a method for identifying the number of repeat nucleotides in at least a portion of a nucleic acid strand, a method of assigning a registration marker within a nucleic acid, and a method of obtaining sequence information from a nucleic acid comprising assigning a registration marker on the nucleic acid.Type: ApplicationFiled: September 7, 2011Publication date: April 19, 2012Inventors: Cynthia J. Burrows, Henry S. White, Ryuji Kawano, Aaron M. Fleming, Na An
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Patent number: 8142630Abstract: Devices are provided for separating and focusing charged analytes, comprising a separation chamber and two or more electrodes, for example, an electrode array. A membrane separates the separation chamber and the electrodes. The separation chamber of the device is configured, that is, the separation chamber has a shaped geometry, which serves to induce a gradient in an electric field generated by the electrodes in the electrode chamber. Optionally, molecular sieve is included in the separation chamber that is operative to shift the location at which a stationary focused band of a charged analyte forms under a given set of focusing process parameters. Methods are provided for separating and focusing charged analytes comprising introducing a first fluid comprising at least one charged analyte into the separation chamber of a device as just described, applying an electric field gradient to the charged analyte to focus the charged analyte in the electric field gradient.Type: GrantFiled: May 19, 2004Date of Patent: March 27, 2012Assignees: Protasis Corporation, Washington State UniversityInventors: David Strand, Dan M. Leatzow, Cornelius F. Ivory
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Patent number: 8137524Abstract: A device is disclosed for electrically controlled transport of ions between a source and a target electrolyte, including a source electrode and a target electrode. The electrodes are each capable of conducting ions, and the source electrode is arranged to receive ions from the source electrolyte and the target electrode is arranged to release ions to the target electrolyte. The device further includes an ion-conductive channel, arranged to receive ions from the source electrode and to release ions to the target electrode. Moreover, the ion-conductive channel is arranged to provide an ionic connection between the source and the target electrodes. The electrodes and the ion-conductive channel are formed of solid or semi-solid materials which are directly or indirectly attached to a support.Type: GrantFiled: June 4, 2007Date of Patent: March 20, 2012Assignee: Oboe IPR ABInventors: Magnus Berggren, Peter Kjäll, David Nilsson, Nathaniel D. Robinson, Agneta Richter Dahlfors, Joakim Isaksson
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Patent number: 8123925Abstract: An electrophoretic apparatus that allows bubbles to be readily removed out of an electrophoretic passage. The passage for electrophoretic medium, at a connecting section where capillaries filled with electrophoretic medium are connected with a pumping mechanism for filling the electrophoretic medium, is arranged such that the side of the pumping mechanism is disposed below the side of the capillaries, so that the electrophoretic medium flows from down to up at the connecting section when filling the electrophoretic medium into the capillaries. Preferably, the passage between the capillary array and the buffer solution is controlled by using a rotary-type valve having high withstand pressure to simplify the passage structure. The dead volume of the passage can be reduced and the valuable electrophoretic medium can be efficiently used. The amount of used electrophoretic medium required for the removal of the bubble can be also reduced.Type: GrantFiled: November 21, 2007Date of Patent: February 28, 2012Assignee: Hitachi High-Technologies CorporationInventors: Tomohiro Shoji, Jin Matsumura, Hidenori Namba
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Publication number: 20120043208Abstract: A multi-channel gel electrophoresis apparatus for efficiently collecting molecules isolated by gel electrophoresis so they can be further analyzed, identified, or used as reagents or medications. The apparatus using a novel “tagless” strategy that combines multi-dimensional separation of endogenous complexes with mass spectrometric monitoring of their composition. In this procedure, putative protein complexes are identified based on the co-migration of collections of polypeptides through multiple orthogonal separation steps. A majority of E. coli proteins are shown to remain in stable complexes during fractionation of a crude extract through three chromatographic steps.Type: ApplicationFiled: July 5, 2011Publication date: February 23, 2012Applicant: The Regents of the University of CaliforniaInventors: Jian Jin, Mark D. Biggin, Robert A. Nordmeyer, Ming Dong, Earl W. Cornell, Megan Choi, Halina Ewa Witkowski, Bong-Gyoon Han, Robert M. Glaeser
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Publication number: 20120015355Abstract: A size standard, kit includes a size standard, method of defining a size standard and method of analysis using a size standard. The size standard is intended to include size standard elements which have a size greater than and/or less than and/or different from the components of a sample which are to be sized. This means that the same characteristic unit, such as a dye, can be used to label the component and the size standard. A further characteristic unit, from amongst a limited number of such characteristic units is liberated from use only on size standards for use on components. The method is therefore particularly useful in multiplex amplification of STRs.Type: ApplicationFiled: June 29, 2009Publication date: January 19, 2012Applicant: FORENSIC SCIENCE SERVICE LIMITEDInventors: Valerie Carol Tucker, Pieris Koumi, Andrew Hopwood, Keith Elliot
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Publication number: 20120004434Abstract: The present invention provides germania-silica-based sol-gel monoliths that form the solid-phase material for extraction, isolation, preconcentration, and separation of analytes. In one embodiment, the germania-silica-based sol-gel monolith can be used to coat surfaces of the inner walls of extraction and chromatographic columns. In a preferred embodiment, the sol-gel germania-silica monolith of the present invention is formed from hydrolysis and polycondensation of precursors comprising tetraethoxygermane, tetramethoxysilane, and polyethylene glycol. Also provided are methods of preparing the germania-silica-based sol-gel monolith of the present invention.Type: ApplicationFiled: June 3, 2011Publication date: January 5, 2012Applicant: University of South FloridaInventors: Abdul Malik, Erica B. Turner, Scott S. Segro
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Publication number: 20120000779Abstract: Provided herein is a surface acoustic wave (“SAW”) sensor device including an isolation component of a target biomolecule. A sample containing the target biomolecule is separated by its size using electrophoresis, and sequentially reacts with a SAW sensor. In other words, the device is capable of detecting the target biomolecule by separating biomolecules using electrophoresis, and applying the separated biomolecules to the SAW sensor.Type: ApplicationFiled: December 21, 2010Publication date: January 5, 2012Applicants: AJOU UNIVERSITY INDUSTRY-ACADEMIC COOPERATION FOUNDATION, SAMSUNG ELECTRONICS CO., LTD.Inventors: Hun Joo LEE, Soo Suk LEE, Mi Jeong SONG, Kyung Yeon HAN, Jae Ho KIM
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Publication number: 20110240471Abstract: The present invention provides exchangeable, reagent pre-loaded carriers (10), preferably in the form of plastic sheets, which can be temporarily applied to an electrode array (16) on a digital microfluidic (DMF) device (14). The carrier (10) facilitates virtually un-limited re-use of the DMF devices (14) avoiding cross-contamination on the electrode array (16) itself, as well as enabling rapid exchange of pre-loaded reagents (12) while bridging the world-to-chip interface of DMF devices (14). The present invention allows for the transformation of DMF into a versatile platform for lab-on-a-chip applications.Type: ApplicationFiled: September 30, 2009Publication date: October 6, 2011Applicants: TECAN TRADING AGInventors: Aaron R. Wheeler, Irena Barbulovic-Nad, Hao Yang, Mohamed Abdelgawad
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Patent number: 8030092Abstract: An electrophoresis apparatus is generally disclosed for sequentially analyzing a single sample or multiple samples having one or more analytes in high or low concentrations. The apparatus comprises a relatively large-bore transport capillary which intersects with a plurality of small-bore separation capillaries and includes a valve system. Analyte concentrators, having antibody-specific (or related affinity) chemistries, are stationed at the respective intersections of the transport capillary and separation capillaries to bind one or more analytes of interest. The apparatus allows the performance of two or more dimensions for the optimal separation of analytes. The apparatus may also include a plurality of valves surrounding each of the analyte concentrators to localize each of the concentrators to improve the binding of one or more analytes of interest.Type: GrantFiled: November 17, 2006Date of Patent: October 4, 2011Assignee: Princeton Biochemicals, Inc.Inventor: Norberto A. Guzman
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Patent number: 8007725Abstract: An electrophoresis apparatus is generally disclosed for sequentially analyzing a single sample or multiple samples having one or more analytes in high or low concentrations. The apparatus comprises a relatively large-bore transport capillary which intersects with a plurality of small-bore separation capillaries and includes a valve system. Analyte concentrators, having antibody-specific (or related affinity) chemistries, are stationed at the respective intersections of the transport capillary and separation capillaries to bind one or more analytes of interest. The apparatus allows the performance of two or more dimensions for the optimal separation of analytes. The apparatus may also include a plurality of valves surrounding each of the analyte concentrators to localize each of the concentrators to improve the binding of one or more analytes of interest.Type: GrantFiled: November 17, 2006Date of Patent: August 30, 2011Assignee: Princeton Biochemicals, Inc.Inventor: Norberto A. Guzman
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Patent number: 7993507Abstract: The present invention is related to a method of separation of compounds by electrophoresis in which the compounds such as genes, proteins, etc. may be analyzed very precisely as samples are introduced directly into the separation tubes of the chip at the collection site, and therefore, it is not necessary to have separate fluid paths or individual sample storing apparatus that have been necessary for the conventional electrophoresis; it is easy to make the chips as the structure of the chip becomes extremely simple, and high-density arrangement of the separation tubes is enabled; and further, the compounds such as genes, proteins, etc. may be analyzed very precisely without interference in the storage tubs by using a non-polar solvent as the solvent of the sample storage tub.Type: GrantFiled: November 16, 2005Date of Patent: August 9, 2011Assignee: Korea Research Institute of Standards and ScienceInventors: Sang-Ryoul Park, In-Chul Yang, Young-Ho Kim
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Publication number: 20110186432Abstract: Various embodiments provide, for example, buffer compositions and/or sieving formulations useful in connection with electrophoresis instruments, such as capillary electrophoresis (CE) devices. In various embodiments, a buffer composition can include Bis-Tris, TAPS and/or TAPSO, and, optionally, a chelating agent, such as EDTA. Methods of separating samples containing bio-molecules, such as DNA or RNA, are also described.Type: ApplicationFiled: January 28, 2011Publication date: August 4, 2011Applicant: APPLIED BIOSYSTEMS, LLCInventors: Kevin J. Hacker, Karl O. Voss
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Patent number: 7976691Abstract: A microfluidic device and method is disclosed having one or more membranes for the control of electrolysis. In one embodiment, a microfluidic device is disclosed that includes body with first channel and second channels separated by a gel layer. A first electrode positioned in the first channel and a second electrode positioned in the second channel wherein a potential applied to the first and second electrodes passes electrons from the first channel to the second channel through the gel layer. In another embodiment, a microfluidic device includes a body having a surface with a channel separating two first reservoirs. One or more membranes are positioned on the surface covering a portion of the channel and a blank is positioned covering the channel and the one or more membranes. A second reservoir through the blank is in contact with the membrane, each second reservoir in communication with the channel via the membrane.Type: GrantFiled: February 28, 2007Date of Patent: July 12, 2011Assignee: Intel CorporationInventors: Scott Sibbett, Dimiter Petsev
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Patent number: RE43122Abstract: The present invention provides an on-chip packed reactor bed design that allows for an effective exchange of packing materials such as beads at a miniaturized level. The present invention extends the function of microfluidic analysis systems to new applications including on-chip solid phase extraction (SPE) and on-chip capillary electrochromatography (CEC). The design can be further extended to include integrated packed bed immuno- or enzyme reactors.Type: GrantFiled: June 22, 2010Date of Patent: January 24, 2012Assignee: The Governors of the University of AlbertaInventors: D. Jed Harrison, Richard Oleschuk, Loranelle L. Lockyear, Cameron Skinner, Paul Li