Patents by Inventor Lakmal Jayasinghe

Lakmal Jayasinghe has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20170058338
    Abstract: The invention relates to improving the movement of a target polynucleotide with respect to a transmembrane pore when the movement is controlled by a polynucleotide binding protein. The invention also relates to improved transmembrane pores and polynucleotide binding proteins.
    Type: Application
    Filed: May 1, 2015
    Publication date: March 2, 2017
    Applicant: Oxford Nanopore Technologies Ltd.
    Inventors: Lakmal Jayasinghe, Elizabeth Jayne Wallace, Jonathan Bankes Pugh, Richard George Hambley, Neil Roger Wood, Clive Gavin Brown, James White
  • Publication number: 20170058337
    Abstract: The invention relates to mutant forms of Msp. The invention also relates to polynucleotide characterisation using Msp.
    Type: Application
    Filed: May 1, 2015
    Publication date: March 2, 2017
    Applicant: Oxford Nanopore Technologies Ltd. Oxford Nanapore TEchnologies Lomited
    Inventors: James Anthony Clarke, Andrew John Heron, Lakmal Jayasinghe, Elizabeth Jayne Wallace
  • Publication number: 20170002406
    Abstract: The invention relates to new methods of controlling the movement of polynucleotides through transmembrane pores. The invention also relates to new methods of characterising target polynucleotides using helicases.
    Type: Application
    Filed: September 10, 2014
    Publication date: January 5, 2017
    Applicant: Oxford Nanopore Technologies Ltd.
    Inventors: Rebecca Victoria Bowen, Clive Gavin Brown, Mark Bruce, Andrew John Heron, Elizabeth Jayne Wallace, James White, Joseph Hargreaves Lloyd, David Antoni Alves, Domenico Caprotti, Lakmal Jayasinghe, Luke McNeill, John Milton, Antonino Puglisi, Szabolcs Soeroes
  • Patent number: 9447152
    Abstract: The invention relates to a mutant ?-hemolysin (?-HL) pore which is useful for detecting one or more nucleotides by stochastic sensing. The pore is particularly useful for sequencing DNA or RNA. A molecular adaptor that allows detection of the nucleotide(s) is covalently attached to the pore. The pore is specifically modified to facilitate positioning of the adaptor and may be modified to facilitate covalent attachment.
    Type: Grant
    Filed: July 6, 2009
    Date of Patent: September 20, 2016
    Assignee: Oxford Nanopore Technologies Limited
    Inventors: James Anthony Clarke, Lakmal Jayasinghe, Terence Reid, John Hagan Pryce Bayley
  • Publication number: 20160076092
    Abstract: The invention relates to constructs comprising a transmembrane protein pore subunit and a nucleic acid handling enzyme. The pore subunit is covalently attached to the enzyme such that both the subunit and enzyme retain their activity. The constructs can be used to generate transmembrane protein pores having a nucleic acid handling enzyme attached thereto. Such pores are particularly useful for sequencing nucleic acids. The enzyme handles the nucleic acid in such a way that the pore can detect its component nucleotides by stochastic sensing.
    Type: Application
    Filed: September 18, 2015
    Publication date: March 17, 2016
    Inventors: Lakmal JAYASINGHE, John Hagan Pryce BAYLEY, Stephen CHELEY, Brian MCKEOWN, James WHITE, James Anthony CLARKE
  • Patent number: 9222082
    Abstract: The invention provides method of covalently coupling two or more moieties, the method comprising: (a) providing a first moiety having covalently attached thereto (i) at least one first linker comprising a first hybridizable region and (ii) at least one first group capable of forming a covalent bond; (b) providing a second moiety having covalently attached thereto (i) at least one second linker comprising a second hybridizable region capable of hybridizing to the first hybridizable region and (ii) at least a second group capable of forming a covalent bond with the first group; (c) contacting the first and second moieties under conditions that allow the first and second hybridizable regions to hybridize and link the moieties; and (d) exposing the linked moieties to conditions that allow the formation of a covalent bond between the first and second groups.
    Type: Grant
    Filed: January 29, 2010
    Date of Patent: December 29, 2015
    Assignee: Oxford Nanopore Technologies Limited
    Inventors: Lakmal Jayasinghe, John Milton, Luke McNeill, James Anthony Clarke, James White, Ruth Moysey
  • Publication number: 20150218629
    Abstract: The invention relates to methods using constructs comprising a helicase and an additional polynucleotide binding moiety. The helicase is attached to the polynucleotide binding moiety and the construct has the ability to control the movement of a polynucleotide. The constructs can be used to control the movement of polynucleotides and are particularly useful for sequencing polynucleotides.
    Type: Application
    Filed: July 18, 2013
    Publication date: August 6, 2015
    Inventors: Andrew Heron, James Clarke, Ruth Moysey, Elizabeth Jayne Wallace, Mark Bruce, Lakmal Jayasinghe, Domenico Caprotti, Szabolcs Soeroes, Luke McNeill, Mihaela Misca
  • Publication number: 20150191709
    Abstract: The invention relates to modified helicases with reduced unbinding from polynucleotides. The helicases can be used to control the movement of polynucleotides and are particularly useful for sequencing polynucleotides.
    Type: Application
    Filed: July 18, 2013
    Publication date: July 9, 2015
    Inventors: Andrew Heron, James Clarke, Ruth Moysey, Jayne Wallace, Mark Bruce, Lakmal Jayasinghe, Domenico Caprotti, Szabolcs Soeroes, Luke McNeill, David Alves, Rebecca Bowen, John Milton
  • Publication number: 20150068904
    Abstract: The invention relates to mutant forms of lysenin. The invention also relates to analyte characterisation using lysenin.
    Type: Application
    Filed: March 15, 2013
    Publication date: March 12, 2015
    Applicant: OXFORD NANOPORE TECHNOLOGIES LIMITED
    Inventors: Mark Bruce, James Clarke, Andrew Heron, Lakmal Jayasinghe, Jayne Wallace
  • Publication number: 20150031020
    Abstract: The invention relates to constructs comprising a transmembrane protein pore subunit and a nucleic acid handling enzyme. The pore subunit is covalently attached to the enzyme such that both the subunit and enzyme retain their activity. The constructs can be used to generate transmembrane protein pores having a nucleic acid handling enzyme attached thereto. Such pores are particularly useful for sequencing nucleic acids. The enzyme handles the nucleic acid in such a way that the pore can detect its component nucleotides by stochastic sensing.
    Type: Application
    Filed: August 8, 2014
    Publication date: January 29, 2015
    Inventors: Lakmal JAYASINGHE, John Hagan Pryce BAYLEY, Stephen CHELEY, Brian MCKEOWN, James WHITE, James Anthony CLARKE
  • Publication number: 20140186823
    Abstract: The invention relates to mutant forms of Msp. The invention also relates to nucleic acid characterisation using Msp.
    Type: Application
    Filed: February 10, 2012
    Publication date: July 3, 2014
    Applicant: OXFORD NANOPORE TECHNOLOGIES LIMITED
    Inventors: James Clarke, Andrew John Heron, Lakmal Jayasinghe, Jayne Wallace, James White
  • Publication number: 20140051069
    Abstract: The invention relates to constructs comprising a transmembrane protein pore subunit and a nucleic acid handling enzyme. The pore subunit is covalently attached to the enzyme such that both the subunit and enzyme retain their activity. The constructs can be used to generate transmembrane protein pores having a nucleic acid handling enzyme attached thereto. Such pores are particularly useful for sequencing nucleic acids. The enzyme handles the nucleic acid in such a way that the pore can detect its component nucleotides by stochastic sensing.
    Type: Application
    Filed: August 16, 2013
    Publication date: February 20, 2014
    Applicant: OXFORD NANOPORE TECHNOLOGIES LIMITED
    Inventors: Lakmal JAYASINGHE, John Hagan Pryce BAYLEY, Stephen CHELEY, Brian MCKEOWN, James WHITE, James Anthony CLARKE
  • Publication number: 20120100530
    Abstract: The invention relates to constructs comprising a nucleic acid binding protein and a surface. At least one native accessible cysteine residue is removed from the binding protein. The binding protein is attached to the surface via one or more accessible cysteine residues. The removal of other accessible cysteine residues from the protein allows control attachment to the surface. The constructs can be used to generate transmembrane pores having a nucleic acid binding protein attached thereto. Such pores are particularly useful for sequencing nucleic acids. The enzyme handles the nucleic acid in such a way that the pore can detect each of its component nucleotides by stochastic sensing.
    Type: Application
    Filed: January 29, 2010
    Publication date: April 26, 2012
    Applicant: OXFORD NANOPORE TECHNOLOGIES LIMITED
    Inventors: Ruth Moysey, Michael Knaggs, Lakmal Jayasinghe, James White, Brian Mckeown, John Milton
  • Publication number: 20120064599
    Abstract: The invention provides method of covalently coupling two or more moieties, the method comprising: (a) providing a first moiety having covalently attached thereto (i) at least one first linker comprising a first hybridizable region and (ii) at least one first group capable of forming a covalent bond; (b) providing a second moiety having covalently attached thereto (i) at least one second linker comprising a second hybridizable region capable of hybridizing to the first hybridizable region and (ii) at least a second group capable of forming a covalent bond with the first group; (c) contacting the first and second moieties under conditions that allow the first and second hybridizable regions to hybridize and link the moieties; and (d) exposing the linked moieties to conditions that allow the formation of a covalent bond between the first and second groups.
    Type: Application
    Filed: January 29, 2010
    Publication date: March 15, 2012
    Applicant: OXFORD NANOPORE TECHNOLOGIES LIMITED
    Inventors: Lakmal Jayasinghe, John Milton, Luke McNeill, James Clarke, James White, Ruth Moysey
  • Publication number: 20110229877
    Abstract: The invention relates to constructs comprising a transmembrane protein pore subunit and a nucleic acid handling enzyme. The pore subunit is covalently attached to the enzyme such that both the subunit and enzyme retain their activity. The constructs can be used to generate transmembrane protein pores having a nucleic acid handling enzyme attached thereto. Such pores are particularly useful for sequencing nucleic acids. The enzyme handles the nucleic acid in such a way that the pore can detect its component nucleotides by stochastic sensing.
    Type: Application
    Filed: July 6, 2009
    Publication date: September 22, 2011
    Applicant: OXFORD NANOPORE TECHNOLOGIES LIMITED
    Inventors: Lakmal Jayasinghe, Hagan Bayley, Stephen Cheley, Brian Mckeown, James White, James Clarke
  • Publication number: 20110177498
    Abstract: The invention relates to a mutant ?-hemolysin (?-HL) pore which is useful for detecting one or more nucleotides by stochastic sensing. The pore is particularly useful for sequencing DNA or RNA. A molecular adaptor that allows detection of the nucleotide(s) is covalently attached to the pore. The pore is specifically modified to facilitate positioning of the adaptor and may be modified to facilitate covalent attachment.
    Type: Application
    Filed: July 6, 2009
    Publication date: July 21, 2011
    Applicant: OXFORD NANOPORE TECHNOLOGIES LIMITED
    Inventors: James Clarke, Lakmal Jayasinghe, Terence Reid, Hagan Bayley