Abstract: The invention provides methods, apparatus and kits for integrally labeling polymeric gels, such as polyacrylamide and agarose gels, with indicia that can serve, inter alia, unambiguously to identify the individual gel, using polymeric film labeled with detectable indicia and coated with materials that bond to the gel matrix as the gel polymerizes.

Abstract: The invention relates to capillary electrophoretic methods for detecting ligands or hit compounds that can bind to a selected target at or above a selected binding strength. The method allows one to rank various ligands based on their relative affinity, i.e., the relative stability of the target/ligand complex during capillary electrophoresis under selected conditions. The method also enables selective detection of strong-to-moderate binding hit compounds, even in the presence of high concentrations of weaker, competitive hit compounds.

Abstract: The present invention relates to an improved EPD which comprises the in plane switching mode. More specifically, the EPD of the present invention comprises isolated cells formed from microcups of well defined size, shape and aspect ratio and the movement of the particles in the cells is controlled by the in-plane switching mode. The EPD of the present invention may be produced in a continuous manufacturing process, and the display gives improved color saturation.

Abstract: Methods and apparatus are presented that facilitate electrophoresis of prior-cast, hydratable separation media, usefully immobilized pH gradient (IPG) strips. The method exploits the swelling of prior-cast, hydratable separation media upon rehydration to help lodge the media in an enclosing member that permits spaced electrical communication with the enclosed separation media. The electrical communication permits a voltage gradient to be established in the enclosed separation medium sufficient to effect separation of analytes therein. Cassettes, buffer cores, electrophoresis systems and kits are presented for effecting the methods of the invention.

Abstract: A card may include a photoconductive layer and an electrophoretic layer. The impedance of the photoconductive layer is lowered when struck by light from the light-emitting layer. Where the impedance of the photoconductive layer is lowered, the electrophoretic layer may be addressed by an applied electric field to update an image on the card. The image on a card may be updated by a system of updating an image on a card and a method of updating an image on a card that are presented.

Abstract: A sieving medium for use in the separation of analytes in a sample containing at least one such analyte comprises a monomeric non-ionic surfactant of the of the general formula, B-A, wherein A is a hydrophilic moiety and B is a hydrophobic moiety, present in a solvent at a concentration forming a self-assembled micelle configuration under selected conditions and having an aggregation number providing an equivalent weight capable of effecting the size separation of the sample solution so as to resolve a target analyte(s) in a solution containing the same, the size separation taking place in a chromatography or electrophoresis separation system.

Abstract: An improved system for running electrophoresis gels “face up” is described. The system includes a single gel capacity strip holder, two electrodes, a sample cup, and a cover. The system provides a means of separating basic proteins on any length gel strip and the cup provides a user-friendly means of successfully putting the proteins on the gel face.

Abstract: In electrophoretic media, it is advantageous to use pigment particles having about 1 to 15 percent by weight of a polymer chemically bonded to, or cross-linked around, the pigment particles. The polymer desirably has a branched chain structure with side chains extending from a main chain. Charged or chargeable groups can be incorporated into the polymer or can be bonded to the particles separately from the polymer. The polymer-coated particles can be prepared by first attaching a polymerizable or polymerization-initiating group to the particle and then reacting the particle with one or more polymerizable monomers or oligomers.

Abstract: The invention provides a device and method for the manipulation of materials (e.g., particles, cells, macromolecules, such as proteins, nucleic acids or other moieties) in a fluid sample. The device comprises a substrate having a plurality of microstructures and an insulator film on the structures. Application of a voltage to the structures induces separation of materials in the sample. The device and method are useful for a wide variety of applications such as dielectrophoresis (DEP) or the separation of a target material from other material in a fluid sample.

Abstract: The invention provides a microfluidic apparatus for performing 2-D biomolecular separations. The microfluidic 2-D device may include first and second planar substrates which include at least a first dimension microchannel extending in a first direction and an array of second dimension microchannels extending in a second direction, preferably, orthogonal to the first dimension. The ends of at least some of the microchannels are in fluid communication with a plurality of reservoirs. The substrates may further include a number of microchannels and reservoirs. The reservoirs are in electrical communication with a plurality of electrodes and voltage power sources. The device enables two dimensional separations of proteins and other biomolecules. According to another aspect of the invention, an isoelectric point based separation is enabled in a first dimension, and a size based separation in a second dimension.

Abstract: A multi-dimensional proteomic analysis method utilizing cationic electrophoresis is described. The method includes separating proteins in one direction using cationic electrophoresis and separating the proteins in a second orthogonal direction using other electrophoresis separation methods such as denaturing electrophoresis and electrophoresis subsequent to proteolytic cleavage or isofocussing. The two dimensional array may be used to determine various protein-protein interactions in a sample.

Abstract: An apparatus and method for conducting electrophoresis, includes a cassette, gel, and electrolyte solution in contact with the gel. The electrolyte solution has high capacity and low conductivity properties, so that low volumes of electrolyte solution can be used.

Abstract: The present invention provides an integrated, fully automated, high-throughput system for two-dimensional electrophoresis comprised of gel-making machines, gel processing machines, gel compositions and geometries, gel handling systems, sample preparation systems, software and methods. The system is capable of continuous operation at high-throughput to allow construction of large quantitative data sets.

Abstract: The electrophoresis apparatus comprises rectifier (A) which rectifies an AC current from a universal AC power source and outputs a rectified wave, an electrophoresis cell and an electric controller which applies an electric output from the rectifier (A) to a carrier disposed in the electrophoresis cell, the elastic controller comprising a controller (3) for indirectly controlling, in accordance with external inputs, a driving section (6) which controls an electric output from the rectifier circuit. The electrophoresis cell unit defines a recess for receiving the electric controller, and a cover is positionable over the electrophoresis cell unit. The cover includes a cover terminal, where the cover and cover terminal are shaped to electrically connect an output terminal of the electric controller to an input terminal of the electrophoresis cell unit when the; cell covers the electrophoresis cell unit.

Abstract: Electrophoretic displays include a light-emitting layer, a photoconductive layer, and an electrophoretic layer. The light-emitting layer may be an organic, light-emitting material, or organic, light-emitting diode, which is addressable using a multiplex addressing drive scheme. The impedance of the photoconductive layer is lowered when struck by light from the light-emitting layer. As a result of the lowered impedance of the photoconductive layer, the electrophoretic layer, which itself cannot be multiplexed, is addressed at a lower, subthreshold voltage.

Abstract: Apparatus for conducting electrophoresis therein includes a chamber with a gel matrix. The chamber has a first sealed region and a second sealed region, and an anode within the first sealed region of the chamber and in contact with the gel matrix, and a cathode within the second sealed region and in contact with the gel matrix. At least one of the electrodes also provides ions for driving the electrophoresis. The apparatus further includes a matrix with at least one sparingly water-soluble salt.

Abstract: In the method moving a sample substance by means of a sample feeder (26) form a sample pickup site to a delivery site (20) of a sample processor (10), the invention proposes fitting the sample feeder (26) with at least one porous material element having a pore size such that the sample substance shall be kept in the liquid phase in the porous material at least during sample pickup by the sample feeder (26) and during sample delivery to the sample processor (10).

Abstract: The present invention is concerned with a disposable electrophoresis cassette particularly suitable for pre-cast polyacrylamide gels for protein and nucleic acid electrophoresis. The invention also comprises a support plate for the said cassette that acts as a heat sink and provides a more uniform migration front in operation since the temperature of the gel is substantially the same during electrophoresis operation. Also disclosed is a novel comb element for filling the cassette, and a novel method therefor.

Abstract: This invention relates to an electrophoretic display comprising cells of well-defined shape, size and aspect ratio which cells are filled with charged pigment particles dispersed in a solvent, and novel processes for its manufacture.

Abstract: The present invention describes sample loading devices for use in polyacrylamide gel electrophoresis systems. The sample loading devices comprise alternating areas of absorbent membranes and diffusion barriers, where the diffusion barriers are formed by the application of some form of energy, such as heat, pressure, laser energy, RF energy or the like. The present invention also describes devices and methods for making sample loading devices, and methods of loading samples into polyacrylamide gel electrophoresis systems.

Abstract: An electrophoresis running tank assembly includes a running tank and a power supply holder that is integral to the running tank. A lid is configured for covering the tank, with two activation arms depending downwardly from the lid and with peripheral vertical skirts of the lid overlapping the walls of the tank. Two switches are held by a switch assembly in the power supply holder and are accessible through a space between the power supply holder and a pin wall that supports two connector pins. When the lid is engaged with the tank, the activation arms extend into the space to abut and thereby close the switches, thereby electrically connecting the switches to the electrode. A power supply can be engaged with the pins to energize the electrodes.

Abstract: The invention provides a novel “in situ” loader for electrophoretic gels. The loader comprises a body, containing at least one passage with an inlet and an outlet, and at least a part of the loader can be inserted into a gel holding portion of an electrophoresis apparatus. The loader can be loaded with samples, a variety of protocols performed without having to remove the samples, and electrophoresis performed directly from the loader into a gel. Centrifuges and PCR blocks adapted to accept the loader are also provided. The invention is particularly suited for use in automating DNA sequencing.

Abstract: An encapsulated electrophoretic medium comprises a layer of capsules, each of these capsules comprising a liquid and at least one particle disposed within the liquid and capable of movement upon application of an electric field to the medium. A plurality of spacers are dispersed among the capsules. The medium can be formed by coating a mixture of capsules and spacers on a substrate, or by first coating the capsules and thereafter incorporating the spacers into the layer of capsules.

Abstract: Disclosed herein are novel electrophoretic displays and materials useful in fabricating such displays. In particular, novel encapsulated displays are disclosed. Particles encapsulated therein are dispersed within a suspending, or electrophoretic, fluid. This fluid may be a mixture of two or more fluids or may be a single fluid. The displays may further comprise particles dispersed in a suspending fluid, wherein the particles contain a liquid. In either case, the suspending fluid may have a density or refractive index substantially matched to that of the particles dispersed therein. Finally, also disclosed herein are electro-osmotic displays. These displays comprise at least one capsule containing either a cellulosic or gel-like internal phase and a liquid phase, or containing two or more immiscible fluids. Application of electric fields to any of the electrophoretic displays described herein affects an optical property of the display.

Abstract: Apparatus for conducting electrophoresis separation therein. The apparatus includes a chamber having therein a body of separating gel for carrying therein an electrophoresis separation and electrodes for connecting the chamber to an external electrical power source, thereby driving the electrophoresis separation. According to the invention at least one of the electrodes also providing ions for driving the electrophoresis separation. In one preferred embodiment, the apparatus is a cassette substantially closed before, during and after electrophoresis separation. According to an aspect of the invention the pH in the body of separating gel is substantially constant during the electrophoresis separation.

Abstract: The invention concerns a cassette for an electrophoresis system including an essentially plate shaped body, which includes a first wall for supporting a gel plate, and a second wall for supporting buffer strips, the walls being connected to each other. Further, the second wall is displaceable with respect to the first wall between a first inactive position where the buffer strips are chemically and electrically separated from the gel plate and a second, active position where the buffer strips are in electrical and chemical contact with the gel plate.

Abstract: An apparatus for expressing and unloading an isoelectric focusing gel from an electrophoresis gel tube includes a first support for supporting the gel tube, a plunger rod and a second support for supporting the plunger rod. The first support is mounted on a movable carriage and is moved toward the second support so that the gel tube slides onto the plunger rod to unload the gel from the gel tube. A plurality of gel tubes can be mounted in a rack and the rack coupled to the first support. The first support preferably includes a plurality of openings oriented with the gel tubes for guiding a respective plunger rod through the axial passage of the gel tubes. In preferred embodiments, the second support supporting the plunger rods is substantially stationary while the first support moves toward the second support so that the gel tubes slide onto the plunger rods.

Abstract: An automated assembly for carrying out a first dimension electrophoresis separation of proteins and other macromolecules includes a supply magazine, an automated transferring device and an electrophoresis tank. The tank includes a rack supporting a plurality of gel tubes and includes a chamber for containing a buffer solution in contact with one end of the gel tubes. The assembly includes a planar cover member overlying the tank. The cover member has a plurality of apertures with a guide surface for guiding the pipette through the chamber to the top end of the gel tubes. The supply magazine includes a carousel for storing sample containers, a bar code reader, a holding device and an arm for transferring the sample container from the carousel to the bar code reader and the holding device. The transferring device includes a robotic assembly that is movable in three dimensions for removing a sample from a sample container and delivering the sample to a selected gel tube in the electrophoresis tank.

Abstract: An electrophoresis apparatus, comprises a cartridge configured to be removably mounted in the apparatus, and a separation membrane positioned in the cartridge. The separation membrane has a first side along which a first flow path defined in a first grid element and a second side along which a second flow path defined in a second grid element is provided. Restriction membranes separate buffer flow from the first flow path and the second flow path. The apparatus includes connection blocks which house electrodes and inlets and outlets for buffer flow and sample flows. The cartridge is removable from the connection blocks for replacement with another cartridge.

Abstract: An adaptor for a multi-channel pipettor which allows the user to load multiple wells of a gel simultaneously using gel loading tips. The adaptor has apertures at the top which lead to channels which travel the length of the adaptor and exit at the bottom. Gel loading tips, already affixed onto a multi-channel pipettor, are inserted into the apertures at the top of the adaptor and the ends of the tips exit the adaptor through apertures at the bottom of the adaptor. The apertures at the bottom of the adaptor are spaced so that they match the spacing of wells for various gels.

Abstract: The use of a gel produced by polymerization of a dextran derivative which exhibits groups that contain an alkene structure, for separating nucleic acid by electrophoresis.

Abstract: Methods are provide for determining the relative amounts of individual polynucleotides in a complex mixture. The polynucleotides, after fluorescent labeling, are contacted under hybridization conditions with an array having element disposed at discrete locations on a substrate. The elements comprise two or more distinct polynucleotides that are combined prior to arraying. The level of fluorescence associated with each element provides a measure of its relative amount in the mixture.

Abstract: The electrophoresis apparatus comprises rectifier (A) which rectifies an AC current from a universal AC power source and outputs a rectified wave, an electrophoresis cell and an electric controller which applies an electric output from the rectifier (A) to a carrier disposed in the electrophoresis cell, the elastic controller comprising a controller (3) for indirectly controlling, in accordance with external inputs, a driving section (6) which controls an electric output from the rectifier circuit. The electrophoresis cell unit defines a recess for receiving the electric controller, and a cover is positionable over the electrophoresis cell unit. The cover includes a cover terminal, where the cover and cover terminal are shaped to electrically connect an output terminal of the electric controller to an input terminal of the electrophoresis cell unit when the cell covers the electrophoresis cell unit.

Abstract: The present invention provides an integrated, fully automated, high-throughput system for two-dimensional electrophoresis comprised of gel-making machines, gel processing machines, gel compositions and geometries, gel handling systems, sample preparation systems, software and methods. The system is capable of continuous operation at high-throughput to allow construction of large quantitative data sets.

Abstract: A polyacrylamide gel utilising a buffer system comprising Tris(hydroxymethyl)aminomethane at the concentration range 0.15 to 0.25 M titrated with hydrochloric acid to a pH between 6.5 and 7.5. The gel is substantially stable to polyacrylamide hydrolysis during storage for at extended periods and has an acceptable shelf-life of at least 6 months after storage at about 4° C.

Abstract: Disclosed herein are novel electrophoretic displays and materials useful in fabricating such displays. In particular, novel encapsulated displays are disclosed. Particles encapsulated therein are dispersed within a suspending, or electrophoretic, fluid. This fluid may be a mixture of two or more fluids or may be a single fluid. The displays may further comprise particles dispersed in a suspending fluid, wherein the particles contain a liquid. In either case, the suspending fluid may have a density or refractive index substantially matched to that of the particles dispersed therein. Finally, also disclosed herein are electro-osmotic displays. These displays comprise at least one capsule containing either a cellulosic or gel-like internal phase and a liquid phase, or containing two or more immiscible fluids. Application of electric fields to any of the electrophoretic displays described herein affects an optical property of the display.

Abstract: The present invention provides methods for separating a compound, including a membrane polypeptide. The method includes the use of a bicontinuous lipidic phase. The invention also provides devices that include a bicontinuous lipidic cubic phase, and a kit for use in separating a compound, including a mixture that includes a lipid and an aqueous phase and instructions for using the mixture.

Abstract: Novel and improved chiral stationary phases (CSP) materials comprising a support and completely regiodefined derivitised cyclodextrin chemically bonded via single or double urethane linkage(s) universally applicable in HPLC, LC, TLC, and CCE are obtained using a process based on the almost quantitative reaction of pre-synthesized regiodefined per-functionalized mono- or di- azidocyclodextrin with primary amines.

Abstract: Provided is an apparatus for separating, in a medium, a component from a composition comprising: (1) an array of three or more electrodes arrayed along a pathway along which molecules of the composition are transported; and (2) a power source device for delivering to voltage to the electrodes; wherein the voltages delivered to the electrode array by the power source device are effective to: (a) alter the relative movement along the transport pathway of two or more of the molecules caused by a motive force, or (b) cause the molecules to move along the transport pathway.

Abstract: The present invention provides an integrated, fully automated, high-throughput system for two-dimensional electrophoresis comprised of gel-making machines, gel processing machines, gel compositions and geometries, gel handling systems, sample preparation systems, software and methods. The system is capable of continuous operation at high-throughput to allow construction of large quantitative data sets.

Abstract: The present invention provides an integrated, fully automated, high-throughput system for two-dimensional electrophoresis comprised of gel-making machines, gel processing machines, gel compositions and geometries, gel handling systems, sample preparation systems, software and methods. The system is capable of continuous operation at high-throughput to allow construction of large quantitative data sets.

Abstract: A proteome analyzer includes a separation cassette having a first dimension separation compartment for separation of protein samples by isoelectric focusing and a second dimension separation compartment for separation of protein samples by SDS-polymer network electrophoresis. The first dimension compartment is a reservoir in which a porous material having capillary channels is disposed. The protein samples are disposed in the capillary channels and, in the presence of a pH gradient, are focused spatially by isolectric focusing upon application of an electric field. The second dimension compartment consists of two glass or plastic plates separated by a separation medium. The separation medium is an ultra-thin layer of a low concentration linear polymer supported by an inert matrix. The spatially focused protein samples are contacted with the separation medium in the presence of an electric field to initiate second dimension separation.

Abstract: Disclosed herein are novel electrophoretic displays and materials useful in fabricating such displays. In particular, novel encapsulated displays are disclosed. Particles encapsulated therein are dispersed within a suspending, or electrophoretic, fluid. This fluid may be a mixture of two or more fluids or may be a single fluid. The displays may further comprise particles dispersed in a suspending fluid, wherein the particles contain a liquid. In either case, the suspending fluid may have a density or refractive index substantially matched to that of the particles dispersed therein. Finally, also disclosed herein are electro-osmotic displays. These displays comprise at least one capsule containing either a cellulosic or gel-like internal phase and a liquid phase, or containing two or more immiscible fluids. Application of electric fields to any of the electrophoretic displays described herein affects an optical property of the display.

Abstract: An encapsulated electrophoretic display is made of at least one display element. Each display element includes at least one capsule. The capsule contains at least two substantially immiscible fluids. The first fluid includes an additive, and the second fluid contains a plurality of particles.

Abstract: An adaptor for a multi-channel pipettor which allows the user to load multiple wells of a gel simultaneously using gel loading tips. The adaptor has apertures at the top which lead to channels which travel the length of the adaptor and exit at the bottom. Gel loading tips, already affixed onto a multi-channel pipettor, are inserted into the apertures at the top of the adaptor and the ends of the tips exit the adaptor through apertures at the bottom of the adaptor. The apertures at the bottom of the adaptor are spaced so that they match the spacing of wells for various gels.

Abstract: A simplified electrophoresis apparatus which imposes no excessive operating burden on users, permits stable control, can be configured compact and light in weight, and allows electrophoresis to be carried out as excellently as the conventional electrophoresis apparatus. The electrophoresis apparatus comprises rectifier means (A) which rectifies an AC current from a universal AC power source and outputs a rectified wave, an electrophoresis cell and an electric controller which applies an electric output from said rectifier means (A) to a carrier disposed in the electrophoresis cell, the electric controller comprising control means (3) for indirectly controlling, in accordance with external inputs, a driving section (6) which controls an electric output from the rectifier circuit.

Abstract: The present invention is based at least in part on the discovery of the genomic structure of the human SR-BI gene and on the identification of polymorphic regions within the gene. Accordingly, the invention provides nucleic acids having a nucleotide sequence of an allelic variant of an SR-BI gene and nucleic acids having an SR-BI intronic sequence. The invention also provides methods for identifying specific alleles of polymorphic regions of an SR-BI gene, methods for determining whether a subject has or is at risk of developing a disease which is associated with a specific allele of a polymorphic region of an SR-BI gene, and kits for performing such methods.

Abstract: Disclosed are an apparatus, system, and method for two dimensional electrophoresis of analytes of interest, particularly polypeptides. The apparatus includes a sample separation cavity comprising (1) an electrophoresis region located along an upper portion of the cavity for performing charge and/or size-based electrophoresis in a first dimension along the upper portion, and (2) below the electrophoresis region, a second electrophoresis region for performing electrophoresis in a second dimension in a direction substantially perpendicular to the first dimension. In one preferred embodiment, the second electrophoresis region contains an isoelectric focusing region containing a continuous pKa gradient immobilized on at least one of the major opposing surfaces of the cavity.

Abstract: An electrophoresis container apparatus having (1) a primary container tray made from a UV light transmitting materials, (2) a UV light transmitting gel contained in the primary container tray, and (3) a removable top sheet for covering the gel. The removable top sheet may also be UV light transmitting. The apparatus optionally comes with a handle having pincers for grasping the primary container and permitting easy movement of the apparatus from location to location. Because the apparatus transmits UV light, the gel can be used and analyzed while it is still in the tray. This eliminates the need to remove the gel before analysis and reduces the chances that the gel will be damaged during handling. Similarly, because the apparatus has an optional handle, the user can move the apparatus form location to location without touching the apparatus and exposing the user to dangerous chemicals, e.g., those often used in staining procedures.

Abstract: A system and corresponding method analyzes data for patterns, such as data produced from DNA sequencers. An ASCII text file, generated by DNA sequencer software, is used as the input source for the pattern analysis software program. This text file contains peak intensity data, identified by gel-lane and mobility, for bands corresponding to 2 sequences of differing length. The software uses gel-mobility values of control DNA samples to identify bands of interest from test samples in the dataset. Spurious data point or artifacts are filtered out in this selection process. The selected data is then imported to a second software program that performs algorithms such as linear progression and curve fitting.