Patents Assigned to University of Washington
  • Patent number: 12280376
    Abstract: Devices and systems for droplet generation and methods for generating droplets are described. In an embodiment, the devices and systems include a capillary configured to eject a droplet, such as in response to a voltage applied to an end of the capillary. In an embodiment, the devices and systems include a moveable stage configured to carry a multi-well plate and move the stage relative to the capillary such that the ejected droplet is selectively received by a well of the multi-well plate carried by the moveable stage.
    Type: Grant
    Filed: February 4, 2020
    Date of Patent: April 22, 2025
    Assignee: University of Washington
    Inventors: Daniel Chiu, Li Wu, Yuling Qin
  • Publication number: 20250122318
    Abstract: Crosslinked films having electro-optic activity, compositions and compounds for making the films, methods for making the films, and devices that include the films are disclosed.
    Type: Application
    Filed: December 20, 2024
    Publication date: April 17, 2025
    Applicant: University of Washington
    Inventors: Delwin Elder, Huajun Xu, Bruce H. Robinson, Larry R. Dalton
  • Publication number: 20250115528
    Abstract: Embodiments of the present disclosure provide compositions and methods for increasing nutrient uptake by plants and for effecting soil remediation. Embodiments of the composition and methods comprise a hydrogel bead, a microbial consortia, and a fungi, and can additionally comprise an excipient for administration of the hydrogel bead comprising the microbial consortia and the fungi, one or more seed, water, one or more nutrients, and combinations thereof. Such composition and methods have broad application to reduce fertilizer requirements and use, and to increase plant nutrient access and uptake. The composition and methods have additional application to remediate contaminated mediums such as soil contaminated with chemicals, petroleum, and explosives.
    Type: Application
    Filed: January 5, 2023
    Publication date: April 10, 2025
    Applicant: University of Washington
    Inventors: Mari-Karoliina Henriikka Winkler, Korena Mafune
  • Publication number: 20250118545
    Abstract: A system may control a mass spectrometer to acquire, during a plurality of acquisitions constituting an acquisition cycle, a set of mass spectra of product ions derived from precursor ions isolated based on a parallel isolation window successively positioned throughout a precursor mass-to-charge ratio (m/z) range. The precursor m/z range is divided into a plurality of isolation window units. The parallel isolation window includes, for each acquisition of the acquisition cycle, a set of isolation sub-windows corresponding to a distinct set of isolation window units of the precursor m/z range. At least two adjacent isolation sub-windows of the parallel isolation window are non-contiguous. Each isolation window unit of the precursor m/z range is analyzed at least twice during the acquisition cycle. A mass spectrum for the precursor m/z range may be generated based on the set of mass spectra acquired during the acquisition cycle.
    Type: Application
    Filed: October 6, 2023
    Publication date: April 10, 2025
    Applicants: Thermo Finnigan LLC, University of Washington
    Inventors: Philip M. Remes, Michael J. MacCoss, Jarrett Egertson
  • Patent number: 12272468
    Abstract: The present disclosure provides organic-inorganic hybrid polymer particles, which have desirable surface chemistry and optical properties that make them particularly suitable for biological and optical applications. The present disclosure also provides methods of making organic-inorganic hybrid polymer particles. The present disclosure also provides methods of using the organic-inorganic hybrid polymer particles for biological and optical applications.
    Type: Grant
    Filed: October 11, 2023
    Date of Patent: April 8, 2025
    Assignee: University of Washington
    Inventors: Daniel T. Chiu, Jiangbo Yu, Yu Rong, Changfeng Wu
  • Patent number: 12269764
    Abstract: Hydrogels for entrapment of live microorganisms and methods of their use, such as in wastewater purification, are disclosed.
    Type: Grant
    Filed: October 13, 2020
    Date of Patent: April 8, 2025
    Assignee: University of Washington
    Inventors: Raymond Redcorn, Mari-Karoliina Henriikka Winkler, Bruce Godfrey, David A. Stahl
  • Patent number: 12270067
    Abstract: The present disclosure provides nanoparticle transducers and methods of use thereof for the detection of analyte concentrations in a fluid. Nanoparticle transducers can comprise a nanoparticle, such as a Pdot, coupled to an enzyme that catalyzes a reaction with the analyte. The nanoparticle transducers further comprise chromophores that emit fluorescence that varies as a function of the concentration of one of the elements of the reaction. The nanoparticle transducer thus changes fluorescence as the analyte concentration changes, transforming analyte concentration values into fluorescence intensities. The measurement of these intensities provides a measurement of the analyte concentration. The nanoparticle transducers are biocompatible, allowing for use in vivo, for the monitoring of analyte blood concentrations such as blood glucose concentrations.
    Type: Grant
    Filed: November 23, 2022
    Date of Patent: April 8, 2025
    Assignees: University of Washington, Lamprogen, Inc.
    Inventors: Daniel T. Chiu, Jiangbo Yu, Changfeng Wu, Kai Sun
  • Patent number: 12263193
    Abstract: Compositions and method for reducing the concentration of uremic toxins in the body of a patient suffering from some degree of kidney failure are disclosed. The methods can be used to delay the need for conventional dialysis treatment or as an adjunct therapy to reduce the frequency of dialysis sessions, and in some instances, as an alternative to such dialysis sessions.
    Type: Grant
    Filed: October 14, 2019
    Date of Patent: April 1, 2025
    Assignee: University of Washington
    Inventors: Paul Yager, Jonathan Himmelfarb, Mari-Karoliina Henriikka Winkler, Erin Heiniger, Sujatha Kumar, David Stahl, Bruce Godfrey
  • Publication number: 20250101413
    Abstract: The invention provides methods for preparing DNA sequencing libraries by assembling short read sequencing data into longer contiguous sequences for genome assembly, full length cDNA sequencing, metagenomics, and the analysis of repetitive sequences of assembled genomes.
    Type: Application
    Filed: October 18, 2024
    Publication date: March 27, 2025
    Applicant: University of Washington
    Inventors: Jay Ashok Shendure, Joseph Hiatt, Rupali Patwardhan, Emily Turner
  • Patent number: 12258397
    Abstract: Aspects of the invention described herein include methods of treating, inhibiting, ameliorating and/or eliminating a virus or cancer cells in a subject utilizing genetically engineered human T-cells having receptors for a molecule presented by the virus or the cancer cells, wherein the genetically engineered T cells are isolated utilizing a two-stage MTX selection that employs increasing concentrations of MTX.
    Type: Grant
    Filed: November 12, 2020
    Date of Patent: March 25, 2025
    Assignees: Seattle Children's Hospital, University of Washington
    Inventors: Michael C. Jensen, Suzie Pun, Nataly Kacherovsky
  • Publication number: 20250094855
    Abstract: Systems and methods for optimizing data-driven decision-making in multi-agent systems are described. The system may construct an equilibrium concept to capture multi-layer and/or k-level depth reasoning by agents. The system may determine best-response type conjectures for agents to interact with one another. In some examples, the system may include a machine or an algorithm interacting with a strategic agent (e.g., a human or an entity). The system may include methods for: (1) data-driven estimation and/or learning of conjectures and associated depth; and (2) data-driven design of algorithmic mechanisms for exploring the conjectural equilibrium (CE) space by influencing the strategic agent(s) behaviors through adaptively adjusting and estimating deployed strategies.
    Type: Application
    Filed: July 20, 2022
    Publication date: March 20, 2025
    Applicant: University of Washington
    Inventors: Benjamin Chasnov, Lillian Ratliff, Samuel A Burden, Amy Orsborn, Tanner Fiez, Manchali Maneeshika Madduri, Joseph G Sullivan, Momona Yamagami
  • Patent number: 12252735
    Abstract: Methods of uniquely labeling or barcoding molecules within a cell, a plurality of cells, and/or a tissue are provided. Kits for uniquely labeling or barcoding molecules within a cell, a plurality of cells, and/or a tissue are also provided. The molecules to be labeled may include, but are not limited to, RNAs, cDNAs, DNAs, proteins, peptides, and/or antigens.
    Type: Grant
    Filed: April 30, 2024
    Date of Patent: March 18, 2025
    Assignee: University of Washington
    Inventors: Georg Seelig, Richard Muscat, Alexander B. Rosenberg
  • Patent number: 12252731
    Abstract: Methods of uniquely labeling or barcoding molecules within a nucleus, a plurality of nuclei, a cell, a plurality of cells, and/or a tissue are provided. Kits for uniquely labeling or barcoding molecules within a nucleus, a plurality of nuclei, a cell, a plurality of cells, and/or a tissue are also provided. The molecules to be labeled may include, but are not limited to, RNAs and/or cDNAs.
    Type: Grant
    Filed: April 21, 2023
    Date of Patent: March 18, 2025
    Assignee: University of Washington
    Inventors: Georg Seelig, Alexander B. Rosenberg, Charles Roco
  • Patent number: 12252737
    Abstract: Methods of uniquely labeling or barcoding molecules within a cell, a plurality of cells, and/or a tissue are provided. Kits for uniquely labeling or barcoding molecules within a cell, a plurality of cells, and/or a tissue are also provided. The molecules to be labeled may include, but are not limited to, RNAs, cDNAs, DNAs, proteins, peptides, and/or antigens.
    Type: Grant
    Filed: October 17, 2024
    Date of Patent: March 18, 2025
    Assignee: University of Washington
    Inventors: Georg Seelig, Richard Muscat, Alexander B. Rosenberg
  • Patent number: 12252736
    Abstract: Methods of uniquely labeling or barcoding molecules within a cell, a plurality of cells, and/or a tissue are provided. Kits for uniquely labeling or barcoding molecules within a cell, a plurality of cells, and/or a tissue are also provided. The molecules to be labeled may include, but are not limited to, RNAs, cDNAs, DNAs, proteins, peptides, and/or antigens.
    Type: Grant
    Filed: July 25, 2024
    Date of Patent: March 18, 2025
    Assignee: University of Washington
    Inventors: Georg Seelig, Richard Muscat, Alexander B. Rosenberg
  • Patent number: 12251086
    Abstract: A monitoring system includes a light source, a light detector, a processor, and a non-transitory computer readable medium storing instructions that, when executed by the processor, cause the monitoring system to perform functions. The functions include illuminating, via the light source, a biological sample that is within a container while a fixation process is performed on the biological sample. The functions also include determining, via the light detector, that an optical transmittance of the biological sample satisfies a condition. The functions also include ceasing the fixation process in response to determining that the optical transmittance of the biological sample satisfies the condition.
    Type: Grant
    Filed: August 12, 2021
    Date of Patent: March 18, 2025
    Assignee: University of Washington
    Inventors: Eric J. Seibel, Saniel D. Lim, Mark E. Fauver
  • Patent number: 12252730
    Abstract: Methods of uniquely labeling or barcoding molecules within a nucleus, a plurality of nuclei, a cell, a plurality of cells, and/or a tissue are provided. Kits for uniquely labeling or barcoding molecules within a nucleus, a plurality of nuclei, a cell, a plurality of cells, and/or a tissue are also provided. The molecules to be labeled may include, but are not limited to, RNAs and/or cDNAs.
    Type: Grant
    Filed: April 21, 2023
    Date of Patent: March 18, 2025
    Assignee: University of Washington
    Inventors: Georg Seelig, Alexander B. Rosenberg, Charles Roco
  • Patent number: 12252733
    Abstract: Methods of uniquely labeling or barcoding molecules within a cell, a plurality of cells, and/or a tissue are provided. Kits for uniquely labeling or barcoding molecules within a cell, a plurality of cells, and/or a tissue are also provided. The molecules to be labeled may include, but are not limited to, RNAs, cDNAs, DNAs, proteins, peptides, and/or antigens.
    Type: Grant
    Filed: August 24, 2023
    Date of Patent: March 18, 2025
    Assignee: University of Washington
    Inventors: Georg Seelig, Richard Muscat, Alexander B. Rosenberg
  • Patent number: 12252734
    Abstract: Methods of uniquely labeling or barcoding molecules within a cell, a plurality of cells, and/or a tissue are provided. Kits for uniquely labeling or barcoding molecules within a cell, a plurality of cells, and/or a tissue are also provided. The molecules to be labeled may include, but are not limited to, RNAs, cDNAs, DNAs, proteins, peptides, and/or antigens.
    Type: Grant
    Filed: August 24, 2023
    Date of Patent: March 18, 2025
    Assignee: University of Washington
    Inventors: Georg Seelig, Richard Muscat, Alexander B. Rosenberg
  • Publication number: 20250084476
    Abstract: Embodiments of the present disclosure provide a single stranded nucleic acid construct with a predetermined number of binding sites, wherein the construct comprises a targeting domain, at least one signaling domain, and at least one splint oligonucleotide that hybridizes to complementary regions on the targeting domain and the signaling domain to form a ligation junction to link each domain to form a functional unit. The present disclosure also provides for methods of using the construct to quantify a target nucleic acid through signal intensity. In other embodiments, the disclosure provides use of the construct in multiplexed target detection methods.
    Type: Application
    Filed: July 28, 2022
    Publication date: March 13, 2025
    Applicant: University of Washington
    Inventors: Brian Beliveau, Conor Camplisson