Patents Issued in June 21, 2018
  • Publication number: 20180171292
    Abstract: The present invention provides a method of producing a cell sheet including the following steps (1) seeding and culturing retinal pigment epithelial cells on a collagen gel to form a cell sheet composed of the retinal pigment epithelial cells, and (2) degrading the collagen gel with collagenase to detach the cell sheet composed of the retinal pigment epithelial cells, and the like.
    Type: Application
    Filed: February 14, 2018
    Publication date: June 21, 2018
    Applicant: RIKEN
    Inventors: Masayo TAKAHASHI, Satoshi OKAMOTO, Hiroyuki KAMAO
  • Publication number: 20180171293
    Abstract: The present invention relates to a cytopheretic cartridge for use in treating and/or preventing inflammatory conditions within a subject and to related methods. More particularly, the invention relates to a cytopheretic cartridge that includes a housing and, disposed within the housing, a solid support capable of sequestering activated leukocytes and/or platelets.
    Type: Application
    Filed: July 31, 2017
    Publication date: June 21, 2018
    Inventors: H. David Humes, Deborah A. Buffington, Christopher J. Pino
  • Publication number: 20180171294
    Abstract: A method of creating a microenvironment for culture expansion of T cells. The expanded T cells can be used for a variety of therapeutic and research purposes.
    Type: Application
    Filed: February 28, 2016
    Publication date: June 21, 2018
    Applicant: THE TRUSTEES OF THE UNIVERSITY OF PENNSYLVANIA
    Inventors: Brian J. Czerniecki, Lea Lowenfeld
  • Publication number: 20180171295
    Abstract: A buoyancy enabled separation method for isolation from a sample including a variety of different cells a sparse subset of cells that is differentiated by a plurality of different cell surface markers. Microbubbles conjugated to antibodies are applied sequentially in a container with the previously used microbubbles disrupted prior to applying the next microbubbles conjugated to a different antibody. A system that includes a syringe-like container with a plunger and closeable opening. Further, a method for activating and expanding isolated T cells by applying antigen presenting microbubbbles having a flexible lipid shell mimicking an antigen presenting cell for generating immunological synapses.
    Type: Application
    Filed: December 14, 2017
    Publication date: June 21, 2018
    Inventors: Guixin Shi, Kimberly Liu, Ying-Ting Wang
  • Publication number: 20180171296
    Abstract: Devices, systems, and methods can be used for the automated production of dendritic cells (DC) from dendritic cell progenitors, such as monocytes obtained from peripheral blood. The invention makes it possible to obtain sufficient quantities of a subject's own DC for use in preparing and characterizing vaccines, for activating and characterizing the activation state of the subject's immune response, and to aid in preventing and/or treating cancer or infectious disease.
    Type: Application
    Filed: June 29, 2016
    Publication date: June 21, 2018
    Inventors: Shashi K. Murthy, Bradley B. Collier
  • Publication number: 20180171297
    Abstract: Provided herein are nucleic acid molecules that target the BCL11A enhancer functional regions, compositions comprising the nucleic acid molecules and methods for increasing fetal hemoglobin levels in a cell by disrupting BCL11A expression at the genomic level. Also provided herein are methods and compositions relating to the treatment of hemoglobinopathies by reinduction of fetal hemoglobin levels. In particular, the nucleic acid molecules target the +62, +58, and/or the +55 enhancer functional regions.
    Type: Application
    Filed: May 6, 2016
    Publication date: June 21, 2018
    Applicants: The Children's Medical Center Corporation, The Broad Institute, Inc., Massachusetts Institute of Technology
    Inventors: Daniel E. Bauer, Stuart H. Orkin, Neville Sanjana, Ophir Shalem, Feng Zhang
  • Publication number: 20180171298
    Abstract: The present invention relates to methods for improving therapeutic activity of NK cell, such as their cytotoxic/cytolytic activity, to be used in immunotherapy, by gene editing. In particular, these methods comprise a step of reduction or inactivation of gene expression using specific endonuclease such as TAL-nuclease, CRISPR or Argonaute. An additional genetic modification can be performed by (over)expressing at least one gene involved in N K function. The present invention encompasses also engineered NK cell, pharmaceutical composition containing the same.
    Type: Application
    Filed: June 30, 2016
    Publication date: June 21, 2018
    Inventors: Philippe DUCHATEAU, Jean-Pierre CABANIOLS, Julien VALTON
  • Publication number: 20180171299
    Abstract: The present invention relates to a functional cell sheet using an electroactive conductive polymer and a method of preparing the same, and more particularly, to a cell sheet for tissue engineering which is a growth factor-immobilized cell sheet formed in a single-layer or 3D multilayer form and a composition for inducing osteogenic differentiation including the same.
    Type: Application
    Filed: June 7, 2016
    Publication date: June 21, 2018
    Applicant: NATIONAL CANCER CENTER
    Inventors: Young Nam CHO, Hyung Jae LEE
  • Publication number: 20180171300
    Abstract: Formulations and methods are disclosed for the harvesting and subsequent passaging of human pluripotent stem cells without the use of enzymes and/or scraping to dislodge cells from cell culture vessels. The formulations and methods permit the harvesting of cells as large clusters from the surface of various cell culture vessels including multilayer cell culture vessels. Further, the formulations and methods provide high yields of harvested cells for subsequent passaging and high post-harvest cell viability. Pluripotent stem cells passaged with the formulations according to the methods remain undifferentiated and express typical stem cell markers, while, at the same time, they retain the differentiation capability and arc able to differentiate into the cells in all three germ layers and generate teratomas, even after numerous rounds of harvesting and passaging. These hPSCs also maintain normal karyotype after passaged with the formulations for extended period of time.
    Type: Application
    Filed: December 15, 2017
    Publication date: June 21, 2018
    Inventors: Ying NIE, Jonathan Allen ROWLEY, Thomas FELLNER, Patrick WALSH
  • Publication number: 20180171301
    Abstract: A method of making a cell culture article is provided. The method includes forming a microcarrier from a microcarrier composition comprising a polygalacturonic acid compound or an alginic acid compound, infiltrating the microcarrier with a drying formulation to form an infiltrated microcarrier, and drying the infiltrated microcarrier to form a dried microcarrier, wherein the drying formulation comprises at least one of a saccharide and a monovalent cation.
    Type: Application
    Filed: June 8, 2016
    Publication date: June 21, 2018
    Inventors: Paula Jean Dolley-Sonneville, David Henry, Jeffrey Joseph Scibek, Yue Zhou
  • Publication number: 20180171302
    Abstract: Provided herein are insulin-negative cells that have been genetically modified to report expression of one or more target genes. Exemplified are reporter cell lines that provide a readout of Ngn3, Foxo1 or Tph2 expression. Reporter cells are used to screen for agents that affect expression of one or more of these genes to identify agents capable of converting gut progenitor cells to insulin-positive cells.
    Type: Application
    Filed: June 27, 2016
    Publication date: June 21, 2018
    Inventor: Domenico Accili
  • Publication number: 20180171303
    Abstract: The present invention provides for identification and use of small molecules to induce pluripotency in mammalian cells as well as other methods of inducing pluripotency.
    Type: Application
    Filed: February 8, 2018
    Publication date: June 21, 2018
    Inventors: Yan Shi, Caroline Desponts, Sheng Ding, Hongyan Zhou, Tongxiang Lin, Wenlin Li, Saiyong Zhu
  • Publication number: 20180171304
    Abstract: Provided herein are synthetic living tissue structures comprising multiple layers of fibers deposited in solidified form from a 3D bioprinter, together with kits and methods of use related thereto. The fibers comprise a plurality of mammalian cells dispensed within a solidified biocompatible matrix. The structural integrity of the fiber is maintained upon and after deposition without any additional crosslinking. The fiber is continuously bioprinted through at least two layers of the structure. In one aspect, synthetic muscle tissue structures exhibit a readily assayable contractile functionality.
    Type: Application
    Filed: June 16, 2016
    Publication date: June 21, 2018
    Inventors: Simon BEYER, Tamer MOHAMED, Sheng PAN, Sam WADSWORTH
  • Publication number: 20180171305
    Abstract: The finding that phosphatidylserine (PtdSer) exposure on the outer leaflet of virally transduced cells triggers their engulfment by resident immune cells is described. It is demonstrated that inhibition of phospholipid scramblase 1 (PLSCR1) activity prevents PtdSer externalization and enables prolonged protection of vector-transduced cells from phagocytosis. Methods of inhibiting a virus vector-induced inflammatory response in tissue, methods of prolonging virus vector encoded transgene expression, and methods of modulating an inflammatory response in tissue of a subject, by administering an inhibitor of PLSCR1 are described.
    Type: Application
    Filed: December 20, 2017
    Publication date: June 21, 2018
    Applicant: Salk Institute for Biological Studies
    Inventors: Axel Nimmerjahn, Charles L. Clark
  • Publication number: 20180171306
    Abstract: Methods of using viruses labeled with alkyne-modified biomolecules, such as fatty acids, carbohydrates and lipids, to treat a plant, an insect or an animal infected with a virus or to increase the infectivity of a virus, such as the human immunodeficiency virus, are provided. Also provided are methods of labeling a virus, such as human immunodeficiency virus, with an alkyne-modified biomolecule, such as a fatty acid, a carbohydrate, or an isoprenoid lipid. The viruses labeled with alkyne-modified biomolecules may be combined with a pharmaceutically acceptable excipient to produce a pharmaceutical composition, optionally containing another anti-viral agent and/or a delivery agent, such as a liposome.
    Type: Application
    Filed: January 9, 2018
    Publication date: June 21, 2018
    Inventors: Brian Agnew, David Graham
  • Publication number: 20180171307
    Abstract: The present invention relates to a vaccine for protecting a piglet against diseases associated with a novel pestivirus. The vaccine commonly includes a pestivirus antigen and, optionally an adjuvant. Methods for protecting pigs against diseases associated with pestivirus, including but not limited to congenital tremors and methods of producing the pestivirus vaccine are also provided.
    Type: Application
    Filed: February 9, 2018
    Publication date: June 21, 2018
    Inventors: Joseph Gilbert VICTORIA, Abby Rae PATTERSON, Callie Ann VISEK, Arun V. IYER, Lea Ann HOBBS, Bailey Lauren ARRUDA, Paulo Henrique Elias ARRUDA, Drew Robert MAGSTADT, Kent Jay SCHWARTZ
  • Publication number: 20180171308
    Abstract: The invention is related to a dengue virus or chimeric dengue virus that contains a mutation in the 3? untranslated region (3?-UTR) comprising a ?30 mutation that removes the TL-2 homologous structure in each of the dengue virus serotypes 1, 2, 3, and 4, and nucleotides additional to the ?30 mutation deleted from the 3?-UTR that removes sequence in the 5? direction as far as the 5? boundary of the TL-3 homologous structure in each of the dengue virus serotypes 1, 2, 3, and 4, or a replacement of the 3?-UTR of a dengue virus of a first serotype with the 3?-UTR of a dengue virus of a second serotype, optionally containing the ?30 mutation and nucleotides additional to the ?30 mutation deleted from the 3?-UTR; and immunogenic compositions, methods of inducing an immune response, and methods of producing a dengue virus or chimeric dengue virus.
    Type: Application
    Filed: June 17, 2015
    Publication date: June 21, 2018
    Inventors: Stephen S. Whitehead, Joseph E. Blaney, Brian R. Murphy, Ching-Juh Lai
  • Publication number: 20180171309
    Abstract: The present invention relates to immortalised chicken embryo fibroblasts, to cell cultures comprising such immortalised cells, to vaccines comprising such cells, to methods for the propagation of avian viruses on such cells, and to methods for the preparation of such cells and such vaccines.
    Type: Application
    Filed: December 3, 2015
    Publication date: June 21, 2018
    Applicant: Intervet Inc.
    Inventor: Jaap Kool
  • Publication number: 20180171310
    Abstract: This disclosure concerns a novel modular docosahexaenoic acid (DHA) synthase and recombinant host organisms genetically modified with such synthase and one or more accessory proteins that allow for and/or improve the production of PUFAs in the host organism. The disclosure also concerns methods of making and using such organisms as well as products obtained from such organisms.
    Type: Application
    Filed: June 6, 2016
    Publication date: June 21, 2018
    Inventors: James G. METZ, Jun WANG, Bastien CHEVREUX, Ross E. ZIRKLE, Anne-Cecile BAYNE, James Casey LIPPMEIER
  • Publication number: 20180171311
    Abstract: Presented herein are transposase enzymes and reaction conditions for improved fragmentation and tagging of nucleic acid samples, in particular altered transposases and reaction conditions which exhibit improved insertion sequence bias, as well as methods and kits using the same.
    Type: Application
    Filed: October 12, 2017
    Publication date: June 21, 2018
    Applicant: ILLUMINA, INC.
    Inventors: Christian GLOECKNER, Amirali KIA, Erin BOMATI, Molly HE, Haiying Li Grunenwald, Scott Kuersten, Trina Faye Osothprarop, Darin Haskins, Joshua Burgess, Anupama Khanna, Daniel Schlingman, Ramesh Vaidyanathan
  • Publication number: 20180171312
    Abstract: The present invention relates to variant thioesterases and their use in plants, e.g., to increase enzymatic activity and to promote increased production of mid-chain length fatty acids (e.g., 8 to 14 carbons) and at desired ratios. Further disclosed herein are methods of manufacturing renewable chemicals through the manufacture of novel triglyceride oils followed by chemical modification of the oils. Oils containing fatty acid chain lengths of C8, C10, C12 or C14 are also disclosed and are useful as feedstocks in the methods described herein.
    Type: Application
    Filed: November 10, 2017
    Publication date: June 21, 2018
    Applicant: CORBION BIOTECH, INC.
    Inventor: David DAVIS
  • Publication number: 20180171313
    Abstract: The present invention relates to isolated polypeptides with lipase activity. The invention also relates to polynucleotides encoding the polypeptides; nucleic acid constructs, vectors, and host cells comprising the polynucleotides; compositions comprising the polynucleotides and methods of using the polypeptides or the compositions.
    Type: Application
    Filed: June 13, 2016
    Publication date: June 21, 2018
    Applicant: NOVOZYMES A/S
    Inventors: Kenneth Jensen, Maria Louise Leth, Anna Verena Reiser, Robert Piotr Olinski, Preben Nielsen, Lone Bausgaard
  • Publication number: 20180171314
    Abstract: Thermostable Cas9 nucleases. The present invention relates to the field of genetic engineering and more particularly to nucleic acid editing and genome modification. The present invention provides an isolated Cas protein or polypeptide fragment thereof having an amino acid sequence of SEQ ID NO: 1 or a sequence of at least 77% identity therewith, wherein the Cas protein or polypeptide is capable of DNA cleavage at a temperature in the range 50° C. and 100° C. inclusive. The invention further provides isolated nucleic acid molecules encoding said Cas9 nucleases, expression vectors and host cells. The Cas9 nucleases disclosed herein provide novel tools for genetic engineering at elevated temperatures and are of particular value in the genetic manipulation of thermophilic organisms; particularly microorganisms.
    Type: Application
    Filed: June 6, 2016
    Publication date: June 21, 2018
    Inventors: John Van Der Oost, Martinus Johannes Arnoldus DAAS, Servatius Wilhelmus Maria KENGEN, Willem Meindert DE VOS
  • Publication number: 20180171315
    Abstract: The present invention relates to polypeptides having xanthan degrading activity, and polynucleotides encoding the polypeptides. The invention also relates to nucleic acid constructs, vectors, and host cells comprising the polynucleotides as well as methods of producing and using the polypeptides.
    Type: Application
    Filed: September 15, 2016
    Publication date: June 21, 2018
    Applicant: NOVOZYMES A/S
    Inventors: Dorotea Raventos Segura, Lars Anderson, Lorena Gonzalez Palmen, Liv Spaangner Christiansen, Peter Fischer Hallin, Leigh Murphy, Mette Louise Dissing Overgaard, Rune Nygaard Monrad, Timothy O'Connell, Susanne Tondera, Nina Mussman, Daniela Herbst
  • Publication number: 20180171316
    Abstract: The present invention relates to polypeptides having mannanase activity, catalytic domains, and carbohydrate binding modules, and polynucleotides encoding the polypeptides, catalytic domains, and carbohydrate binding modules. The invention also relates to nucleic acid constructs, vectors, and host cells comprising the polynucleotides as well as methods of producing and using the polypeptides, catalytic domains, and carbohydrate binding modules.
    Type: Application
    Filed: August 4, 2016
    Publication date: June 21, 2018
    Applicant: NOVOZYMES A/S
    Inventors: Nikolaj Spodsberg, Leigh Murphy, Kristian B.R.M. Krogh
  • Publication number: 20180171317
    Abstract: The present invention relates to subtilase variants suitable for use in, e.g., cleaning or detergent compositions, such as laundry detergent compositions and dish wash compositions, including automatic dish wash compositions. The present invention also relates to isolated DNA sequences encoding the variants, expression vectors, host cells, and methods for producing and using the variants of the invention.
    Type: Application
    Filed: June 15, 2016
    Publication date: June 21, 2018
    Applicant: NOVOZYMES A/S
    Inventors: Miguel Duarte Guilherme Pereira Toscano, Vibeke S. Nielsen, Mikael Bauer
  • Publication number: 20180171318
    Abstract: The present invention relates to isolated polypeptides having protease activity, and polynucleotides encoding the polypeptides. The invention further relates to the use of such polypeptides in detergent and/or in cleaning processes. The invention also relates to nucleic acid 5 constructs, vectors, and host cells comprising the polynucleotides as well as methods of producing the polypeptides.
    Type: Application
    Filed: October 14, 2016
    Publication date: June 21, 2018
    Applicant: Novozymes A/S
    Inventor: Morten Gjermansen
  • Publication number: 20180171319
    Abstract: The present invention relates to protease variants and methods for obtaining protease variants. The present invention also relates to polynucleotides encoding the variants; nucleic acid constructs, vectors, and host cells comprising the polynucleotides; and methods of using the variants.
    Type: Application
    Filed: February 8, 2018
    Publication date: June 21, 2018
    Applicant: NOVOZYMES A/S
    Inventors: Frank Winther Rasmussen, Rolf Thomas Lenhard, Miguel Duarte Guilherme Perreira Toscano, Esben Peter Friis, Signe Eskildsen Larsen, Jurgen Carsten Franz Knotzel, Michael Bauer
  • Publication number: 20180171320
    Abstract: The present disclosure relates to serine proteases and variants thereof. Compositions containing the serine proteases are suitable for use in cleaning fabrics and hard surfaces, as well as in a variety of industrial applications.
    Type: Application
    Filed: January 31, 2018
    Publication date: June 21, 2018
    Inventors: MARC KOLKMAN, RIE MEJLDAL, ANJA HEMMINGSEN KELLETT-SMITH, LILIA MARIA BABE
  • Publication number: 20180171321
    Abstract: A complement to tRNAs and a protein translation system are provided that enable the incorporation of non-natural moieties such as non-natural amino acids without compromising the ability to incorporate all of the twenty natural amino acids into the protein. This is achieved by reassigning one of the tRNA anticodons for amino acids that are normally decoded by at least two different tRNA anticodons to a non-natural moiety, wherein at least one codon can be uniquely recognized by the reassigned anticodon and at least one another codon from the same codon box cannot be recognized by the reassigned anticodon. Accordingly, an mRNA for translation is engineered to comprise one or more specific codons corresponding to the reassigned tRNA anticodons so that the non-natural moiety is incorporated into the translated protein at a selected position.
    Type: Application
    Filed: March 29, 2016
    Publication date: June 21, 2018
    Inventors: Sergey MUREEV, Zhenling CUI, Kirill ALEXANDROV
  • Publication number: 20180171322
    Abstract: Disclosed are improved cell-permeable Parkin recombinant proteins (iCP-Parkin) which have been developed as a protein-based anti-neurodegenerative agent for efficient BBB-penetration to effectively deliver the recombinant protein into the brain. A Parkin protein, a dopaminergic neuronal cell death inhibitor, has been fused with a newly developed advanced macromolecule transduction domain (aMTD) and preferably with a solubilization domain (SD) to increase the solubility/yield and cell-/tissue-permeability of the recombinant protein. In addition, the aMTD/SD-fused recombinant iCP-Parkin protein has shown BBB-permeability. Both in vitro and in vivo, the iCP-Parkin recombinant protein improved motor skills, a typical phenotype of Parkinson's disease, by increasing dopamine level in the brain by suppressing apoptosis of dopaminergic neuron cells.
    Type: Application
    Filed: January 25, 2018
    Publication date: June 21, 2018
    Applicant: CELLIVERY THERAPEUTICS, INC.
    Inventor: Daewoong JO
  • Publication number: 20180171323
    Abstract: The present disclosure provides methods, compositions, apparatuses and kits comprising ALDC enzymes having a better stability and/or activity, and, optionally, the yield of ALDC enzymes which can be recovered from microorganisms is improved. In some embodiments, the present disclosure provides methods, apparatuses, compositions and kits for the use of metal ions to increase stability and/or activity, and which further can be used to recover the enzymes from microorganisms in improved yields.
    Type: Application
    Filed: May 18, 2016
    Publication date: June 21, 2018
    Inventors: Jacob Flyvholm Cramer, Lene Bojsen Jensen, Anja Hemmingsen Kellett-Smith, Tove Bladt, Sang-Kyu Lee
  • Publication number: 20180171324
    Abstract: An object of the present invention is to provide a non-human model animal rich in stromal tissue, a cell structure useful for producing the above-described non-human model animal, a method for evaluating a test substance in which the above-described non-human model animal is used, and a method for producing the above-described non-human model animal. According to the present invention, a cell structure is provided which contains a biocompatible macromolecular block and at least a cancer cell and a mesenchymal cell, and in which a plurality of the above-described biocompatible macromolecular blocks are arranged in gaps between a plurality of the above-described cells.
    Type: Application
    Filed: February 2, 2018
    Publication date: June 21, 2018
    Applicant: FUJIFILM Corporation
    Inventors: Kentaro NAKAMURA, Shinji MIMA, Tsukasa KITAHASHI, Chihaya KAKINUMA
  • Publication number: 20180171325
    Abstract: A nanoparticle (for example, quantum dot) serves as a substrate for immobilizing enzymes involved in consecutive reactions as a cascade. This results in a significant increase in the rate of catalysis as well as final product yield compared to non-immobilized enzymes.
    Type: Application
    Filed: December 13, 2017
    Publication date: June 21, 2018
    Inventors: Igor L. Medintz, James N. Vranish, Mario Ancona, Kimihiro Susumu, Sebastian A. Diaz
  • Publication number: 20180171326
    Abstract: An apparatus and method for accelerating and/or inhibiting the migration of cells by applying a time-varying magnetic field to induce eddy currents that promote electrotaxis (galvanotaxis) of cells without the need for chemokines or glucose. The present invention can also be used to study and quantify the metastatic potential of different cell lines.
    Type: Application
    Filed: February 2, 2018
    Publication date: June 21, 2018
    Inventors: Vish Subramaniam, Joseph West, Emily Alkandry, Mohd Nasser, Dinesh Ahirwar, Ramesh Ganju, Travis Jones
  • Publication number: 20180171327
    Abstract: The present invention provides a system for delivering a time-varying stimulation field to a subject. In the system, a power source, a control component and a transmission component operate as a stimulation field generator to provide a predetermined time-varying stimulation field to up-regulate or down-regulate an expression level of human genes. The present invention also provides a wearable apparatus for delivering the time-varying magnetic field to mammalian cells associated with bone formation in a subject. The wearable apparatus contains the stimulation field generator in a housing. The resulted modification on gene regulation of these genes and mammalian cells promotes the retention, repair of and reduction of compromised mammalian cartilage, bone, and associated tissue.
    Type: Application
    Filed: February 19, 2018
    Publication date: June 21, 2018
    Applicant: United States of America as Represented by the Administrator of the National Aeronautics and Spac
    Inventors: Thomas J. Goodwin, Linda C. Shackelford
  • Publication number: 20180171328
    Abstract: Compositions and methods are provided for enzymes with altered properties that involve a systematic approach to mutagenesis and a screening assay that permits selection of the desired proteins. Embodiments of the method are particularly suited for modifying specific properties of restriction endonucleases such as star activity. The compositions includes restriction endonucleases with reduced star activity as defined by an overall fidelity index improvement factor.
    Type: Application
    Filed: January 29, 2018
    Publication date: June 21, 2018
    Applicant: New England Biolabs, Inc.
    Inventors: Zhenyu Zhu, Aine Quimby, Shuang-Yong Xu, Shengxi Guan, Hua Wei, Penghua Zhang, Dapeng Sun, Siu-hong Chan
  • Publication number: 20180171329
    Abstract: Multimeric barcoding reagents for labelling a target nucleic acid comprise: first and second barcode molecules linked together, wherein each of the barcode molecules comprises a nucleic acid sequence comprising a barcode region; and first and second barcoded oligonucleotides. The multimeric barcoding reagents enable spatial sequencing. A single multimeric barcoding reagent can be used to label sub-sequences of an intact nucleic acid molecule or co-localised fragments of a nucleic acid molecule. The labelled sub-sequences can be sequenced and the sequencing data processed to determine the sequence of sub-sequences from a single intact nucleic acid molecule or from co-localised fragments of a nucleic acid molecule. Corresponding libraries, kits, methods and uses are provided.
    Type: Application
    Filed: June 23, 2016
    Publication date: June 21, 2018
    Inventor: Lucas Brandon EDELMAN
  • Publication number: 20180171330
    Abstract: Provided herein are devices and methods for the micro-isolation of biological cellular material. A micro-isolation device described can comprise a photomask that protects regions of interest against DNA-destroying illumination. The micro-isolation device can further comprise photosensitive material defining access wells following illumination and subsequent developing of the photosensitive material. The micro-isolation device can further comprise a chambered microfluidic device comprising channels providing access to wells defined in photosensitive material. The micro-isolation device can comprise a chambered microfluidic device without access wells defined in photosensitive material where valves control the flow of gases or liquids through the channels of the microfluidic device.
    Type: Application
    Filed: January 31, 2018
    Publication date: June 21, 2018
    Inventors: Emil P. KARTALOV, Cheng-Chung LEE, Paul PREDKI
  • Publication number: 20180171331
    Abstract: Provided herein are devices and methods for the micro-isolation of biological cellular material. A micro-isolation device described can comprise a photomask that protects regions of interest against DNA-destroying illumination. The micro-isolation device can further comprise photosensitive material defining access wells following illumination and subsequent developing of the photosensitive material. The micro-isolation device can further comprise a chambered microfluidic device comprising channels providing access to wells defined in photosensitive material. The micro-isolation device can comprise a chambered microfluidic device without access wells defined in photosensitive material where valves control the flow of gases or liquids through the channels of the microfluidic device.
    Type: Application
    Filed: January 31, 2018
    Publication date: June 21, 2018
    Inventors: Emil P. KARTALOV, Cheng-Chung LEE, Paul PREDKI
  • Publication number: 20180171332
    Abstract: The invention relates to a method of treating ocular amyloidosis by reducing TTR expression in a subject by administering a double-stranded ribonucleic acid (dsRNA) that targets a TTR gene to the retinal pigment epithelium of the subject.
    Type: Application
    Filed: July 26, 2017
    Publication date: June 21, 2018
    Inventors: Yukio Ando, Hirofumi Jono, Rene Alvarez, Dinah Wen-Yee Sah
  • Publication number: 20180171333
    Abstract: An antisense molecule capable of binding to a selected target site to induce exon skipping in the dystrophin gene, as set forth in SEQ ID NO: 1 to 59.
    Type: Application
    Filed: July 27, 2017
    Publication date: June 21, 2018
    Inventors: Stephen Donald Wilton, Sue Fletcher, Abbie Adams, Penny Meloni
  • Publication number: 20180171334
    Abstract: Described herein are compounds comprising modified oligonucleotides that are complementary to miR-103 and/or miR-107 and methods of treating diseases and disorders using the compounds.
    Type: Application
    Filed: October 5, 2017
    Publication date: June 21, 2018
    Applicant: Regulus Therapeutics Inc.
    Inventors: Balkrishen Bhat, Neil W. Gibson, Diedre MacKenna, Brandee Wagner, David P. Bartel
  • Publication number: 20180171335
    Abstract: The invention provides oligonucleotides complementary to a non-coding chimeric mitochondrial RNA as well as compositions and kits comprising the same, and their use in treating and preventing metastasis or relapse of a cancer in an individual previously treated for cancer with a therapy. The invention also provides oligonucleotides complementary to a non-coding chimeric mitochondrial RNA as well as compositions and kits comprising the same, and their use in treating a refractory cancer (e.g., a refractory HPV-associated cancer).
    Type: Application
    Filed: November 29, 2017
    Publication date: June 21, 2018
    Inventors: Luis O. Burzio Eriz, Veronica A. Burzio Menendez, Jaime E. Villegas Olavarria
  • Publication number: 20180171336
    Abstract: Aspects of the invention include methods of selectively reducing the deleterious activity of mutant extended trinucleotide repeat containing genes in a cell, as well as compositions used in such methods. The deleterious activity (e.g., toxicity and/or dis-functionality of products encoded thereby) of a mutant extended trinucleotide repeat containing gene may be selectively reduced in a variety of different ways, e.g., by selectively decreasing SPT4 mediated transcriptional activity, by enhancing functionality of proteins encoded thereby, etc. Aspects of the invention further include assays for identifying agents that find use in methods of the invention, e.g. as summarized above. Methods and compositions of the invention find use in a variety of different applications, including the prevention or treatment of disease conditions associated with the presence of genes containing mutant extended trinucleotide repeats, such as Huntington's Disease (HD).
    Type: Application
    Filed: December 6, 2017
    Publication date: June 21, 2018
    Inventors: Tzu-Hao Cheng, Chia-Rung Liu, Tzu-Han Wang, Stanley N. Cohen
  • Publication number: 20180171337
    Abstract: Methods and compositions are provided for oligonucleotides that bind targets of interest. The targets include cells and microvesicles, such as those derived from various diseases. The oligonucleotides can be used for diagnostic and therapeutic purposes. The target of the oligonucleotides can be a therapeutic target such as Complement Component 1, Q Subcomponent (C1q) or a subunit thereof.
    Type: Application
    Filed: June 29, 2016
    Publication date: June 21, 2018
    Inventors: Heather O'Neill, Mark Miglarese, David Spetzler
  • Publication number: 20180171338
    Abstract: The present invention relates generally to immunostimulatory nucleic acids, compositions thereof and methods of using the immunostimulatory nucleic acids. In particular the invention relates to palindrome-containing immunostimulatory nucleic acids and the use of these nucleic acids in treating disease.
    Type: Application
    Filed: February 5, 2018
    Publication date: June 21, 2018
    Applicant: Adiu Tide Pharmaceuticals GmbH
    Inventors: Eugen Uhlmann, Jörg Vollmer, Arthur M. Krieg, Ulrike Samulowitz, Bernard O. Noll
  • Publication number: 20180171339
    Abstract: The present invention relates to the preparation of a medicinal agent comprising DNAzymes according to Seq. ID 2-62 for the prophylaxis and treatment of virus infections that are caused by picornaviruses, in particular by rhinoviruses, in particular for the prophylaxis and treatment of rhinitis, head colds, asthma, COPD and viral infections of the upper respiratory tract.
    Type: Application
    Filed: May 13, 2016
    Publication date: June 21, 2018
    Applicant: Secarna Pharmaceuticals GmbH & Co KG
    Inventors: Daniel POTACZEK, Holger GARN, Harald RENZ
  • Publication number: 20180171340
    Abstract: The present disclosure generally relates to nucleic acid molecules for use in regulating gene expression. Disclosed herein include nucleic acid molecules containing one or more structural elements of the viral capsid enhancer operably linked to a coding sequence of a gene of interest. In some embodiments, the viral capsid enhancer comprises a Downstream Loop (DLP) from a viral capsid protein, or a variant of the DLP.
    Type: Application
    Filed: December 4, 2017
    Publication date: June 21, 2018
    Inventors: Kurt Iver Kamrud, Maung Nyan Win, Nathaniel Stephen Wang, Jason L. DeHart
  • Publication number: 20180171341
    Abstract: The present disclosure relates to the use of a maltose dependent degron to control stability of a protein of interest fused thereto at the post-translational level. The present disclosure also relates to the use of a maltose dependent degron in combination with a maltose-responsive promoter to control gene expression at the transcriptional level and to control protein stability at the post-translational level. The present disclosure also relates to the use of a stabilization construct that couples expression of a cell-growth-affecting protein with the production of non-catabolic compounds. The present disclosure further relates to the use of a synthetic maltose-responsive promoter. The present disclosure further provides compositions and methods for using a maltose dependent degron, a maltose-responsive promoter, and a stabilization construct, either alone or in various combinations, for the production of non-catabolic compounds in genetically modified host cells.
    Type: Application
    Filed: June 24, 2016
    Publication date: June 21, 2018
    Inventors: Penelope R. CHUA, Hanxiao JIANG, Adam Leon MEADOWS