Patents by Inventor Robert Holt

Robert Holt has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20100197100
    Abstract: Semiconductor devices and methods of manufacturing thereof are disclosed. In a preferred embodiment, a method of manufacturing a semiconductor device includes providing a workpiece, and forming a recess in the workpiece. The recess has a depth having a first dimension. A first semiconductive material is formed in the recess to partially fill the recess in a central region to a height having a second dimension. The second dimension is about one-half or greater of the first dimension. A second semiconductive material is formed over the first semiconductive material in the recess to completely fill the recess, the second semiconductive material being different than the first semiconductive material.
    Type: Application
    Filed: April 16, 2010
    Publication date: August 5, 2010
    Inventors: Jin-Ping Han, Henry Utomo, O. Sung Kwon, Oh Jung Kwon, Judson Robert Holt, Thomas N. Adam
  • Patent number: 7737468
    Abstract: Semiconductor devices and methods of manufacturing thereof are disclosed. In a preferred embodiment, a method of manufacturing a semiconductor device includes providing a workpiece, and forming a recess in the workpiece. The recess has a depth having a first dimension. A first semiconductive material is formed in the recess to partially fill the recess in a central region to a height having a second dimension. The second dimension is about one-half or greater of the first dimension. A second semiconductive material is formed over the first semiconductive material in the recess to completely fill the recess, the second semiconductive material being different than the first semiconductive material.
    Type: Grant
    Filed: May 21, 2007
    Date of Patent: June 15, 2010
    Assignees: Infineon Technologies AG, International Business Machines Corporation
    Inventors: Jin-Ping Han, Henry Utomo, O Sung Kwon, Oh Jung Kwon, Judson Robert Holt, Thomas N. Adam
  • Publication number: 20100129802
    Abstract: A method and computer-program product for sequencing nucleic acid sequences using restriction fragment maps derived from end-sequenced nucleotide fragments. The initial nucleotide sequence can be processed to form a shot-gun-data set. The present teachings employ a technique called Restriction Site Shotgun Sequencing (RSSS.) It can reduce the amount of overlap required between fragment ends while still producing a good assembly. A decrease in overlap can be achieved by using additional information in the fragments to assist in determining that two fragments overlap.
    Type: Application
    Filed: July 15, 2009
    Publication date: May 27, 2010
    Applicant: APPLIED BIOSYSTEMS, LLC
    Inventors: Daniel P. FASULO, Robert A. HOLT, Cheryl A. EVANS, Jeannine D. GOCAYNE, Peter W. LI
  • Publication number: 20100129903
    Abstract: Isolated polynucleotides comprising a PITX3 promoter are provided, where a PITX3 regulatory element is operably joined to a PITX3 basal promoter utilizing a non-native spacing between the promoter and regulatory elements. The promoter may be operably linked to an expressible sequence, e.g. reporter genes, genes encoding a polypeptide of interest, regulatory RNA sequences such as miRNA, siRNA, anti-sense RNA, etc., and the like. In some embodiments a cell comprising a stable integrant of an expression vector is provided, which may be integrated in the genome of the cell. The promoter may also be provided in a vector, for example in combination with an expressible sequence. The polynucleotides find use in a method of expressing a sequence of interest, e.g. for identifying or labeling cells, monitoring or tracking the expression of cells, etc.
    Type: Application
    Filed: August 10, 2009
    Publication date: May 27, 2010
    Inventors: Elizabeth M. Simpson, Wyeth W. Wasserman, Robert A. Holt, Steven J. Jones, Daniel Goldowitz, Elodie Portales-Casamar, Cletus D'Souza, Vikramjit Chopra
  • Patent number: 7718500
    Abstract: A structure and method for forming raised source/drain structures in a NFET device and embedded SiGe source/drains in a PFET device. We provide a NFET gate structure over a NFET region in a substrate and PFET gate structure over a PFET region. We provide NFET SDE regions adjacent to the NFET gate and provide PFET SDE regions adjacent to the PFET gate. We form recesses in the PFET region in the substrate adjacent to the PFET second spacers. We form a PFET embedded source/drain stressor in the recesses. We form a NFET S/D epitaxial Si layer over the NFET SDE regions and a PFET S/D epitaxial Si layer over PFET embedded source/drain stressor. The epitaxial Si layer over PFET embedded source/drain stressor is consumed in a subsequent salicide step to form a stable and low resistivity silicide over the PFET embedded source/drain stressor.
    Type: Grant
    Filed: December 16, 2005
    Date of Patent: May 18, 2010
    Assignees: Chartered Semiconductor Manufacturing, Ltd, International Business Machines Corporation (IBM), Samsung Electronics Co., Ltd.
    Inventors: Yung Fu Chong, Zhijiong Luo, Joo Chan Kim, Judson Robert Holt
  • Patent number: 7696335
    Abstract: The invention provides methods, kits, and compositions comprising novel mutant loxP sites. Such sites are particularly useful for procedures requiring multiple site-specific recombination reactions, including deletions or insertions of multiple genes or other sequences in the same organism, staged insertions or deletions of genes of the same organism at different times, assembly of large polynucleotide constructs by serial site-specific recombination, and the like. In one aspect, compositions of the invention includes particular mutant spacer oligonucleotides of loxP recombination elements, the recombination elements themselves, and pairs of non-promiscuous mutant loxP sites.
    Type: Grant
    Filed: October 12, 2006
    Date of Patent: April 13, 2010
    Assignee: BC Cancer Agency
    Inventors: Robert A. Holt, Perseus I. Missirlis
  • Publication number: 20100081201
    Abstract: Isolated polynucleotides comprising an OLIG1 promoter are provided, where an OLIG1 regulatory element is operably joined to an OLIG1 basal promoter utilizing a non-native spacing between the promoter and regulatory elements. The promoter may be operably linked to an expressible sequence, e.g. reporter genes, genes encoding a polypeptide of interest, regulatory RNA sequences such as miRNA, siRNA, anti-sense RNA, etc., and the like. In some embodiments a cell comprising a stable integrant of an expression vector is provided, which may be integrated in the genome of the cell. The promoter may also be provided in a vector, for example in combination with an expressible sequence. The polynucleotides find use in a method of expressing a sequence of interest, e.g. for identifying or labeling cells, monitoring or tracking the expression of cells, etc.
    Type: Application
    Filed: July 17, 2009
    Publication date: April 1, 2010
    Inventors: Elizabeth M. Simpson, Wyeth W. Wasserman, Robert A. Holt, Steven J. Jones, Daniel Goldowitz, Elodie Portales-Casamar, Cletus D'Souza, Vikramjit Chopra
  • Publication number: 20100009524
    Abstract: A semiconductor fabrication method. The method includes providing a semiconductor substrate, wherein the semiconductor substrate includes a semiconductor material. Next, a top portion of the semiconductor substrate is removed. Next, a first semiconductor layer is epitaxially grown on the semiconductor substrate, wherein a first atom percent of the semiconductor material in the first semiconductor layer is equal to a certain atom percent of the semiconductor material in the semiconductor substrate.
    Type: Application
    Filed: July 8, 2008
    Publication date: January 14, 2010
    Applicant: INTERNATIONAL BUSINESS MACHINES
    Inventors: Ashima B. Chakravarti, Judson Robert Holt, Jeremy John Kempisty, Suk Hoon Ku, Woo-Hyeong Lee, Amlan Majumdar, Ryan Matthew Mitchell, Renee Tong Mo, Zhibin Ren, Dinkar Singh
  • Publication number: 20090280568
    Abstract: Isolated polynucleotides comprising an S100B promoter are provided, where an S100B regulatory element is operably joined to an S100B basal promoter utilizing a non-native spacing between the promoter and regulatory elements. The promoter may be operably linked to an expressible sequence, e.g. reporter genes, genes encoding a polypeptide of interest, regulatory RNA sequences such as miRNA, siRNA, anti-sense RNA, etc., and the like. In some embodiments a cell comprising a stable integrant of an expression vector is provided, which may be integrated in the genome of the cell. The promoter may also be provided in a vector, for example in combination with an expressible sequence. The polynucleotides find use in a method of expressing a sequence of interest, e.g. for identifying or labeling cells, monitoring or tracking the expression of cells, etc.
    Type: Application
    Filed: May 7, 2009
    Publication date: November 12, 2009
    Inventors: Elizabeth M. Simpson, Wyeth W. Wasserman, Robert A. Holt, Steven J. Jones, Daniel Goldowitz, Elodie Portales-Casamar, Cletus D'Souza, Vikramjit Chopra
  • Patent number: 7507631
    Abstract: A method of forming and a structure of an electronic device. The method including: forming a trench in a single-crystal semiconductor substrate; forming a dopant diffusion barrier layer on sidewalls and a bottom of the trench; and epitaxially growing a single-crystal semiconductor layer in the trench, the single-crystal semiconductor layer filling the trench, the dopant diffusion barrier layer a barrier to diffusion of semiconductor dopants. Also a power transistor formed by the same method.
    Type: Grant
    Filed: July 6, 2006
    Date of Patent: March 24, 2009
    Assignee: International Business Machines Corporation
    Inventors: Brian Joseph Greene, Judson Robert Holt
  • Publication number: 20080290370
    Abstract: Semiconductor devices and methods of manufacturing thereof are disclosed. In a preferred embodiment, a method of manufacturing a semiconductor device includes providing a workpiece, and forming a recess in the workpiece. The recess has a depth having a first dimension. A first semiconductive material is formed in the recess to partially fill the recess in a central region to a height having a second dimension. The second dimension is about one-half or greater of the first dimension. A second semiconductive material is formed over the first semiconductive material in the recess to completely fill the recess, the second semiconductive material being different than the first semiconductive material.
    Type: Application
    Filed: May 21, 2007
    Publication date: November 27, 2008
    Inventors: Jin-Ping Han, Henry Utomo, O Sung Kwon, Oh Jung Kwon, Judson Robert Holt, Thomas N. Adam
  • Publication number: 20080286871
    Abstract: The invention provides methods and compositions for assembling a modular replacement genome in a host microorganism. After such assembly, the host organism's genome is inactivated or ablated to permit full control of host cellular functions by the replacement genome. A modular replacement genome comprises an assembly of nucleic acid fragments, or segments, derived from one or more natural organisms or from synthetic polynucleotides or from a combination of both. Such an assembly, or set, of segments making up a replacement genome comprises a substantially complete set of genes and regulatory elements for carrying out minimal life functions under predefined culture conditions. The invention provides modular genomes having modules that are amenable to facile replacement, deletion, and/or additions.
    Type: Application
    Filed: November 27, 2007
    Publication date: November 20, 2008
    Inventor: Robert A. Holt
  • Publication number: 20080009109
    Abstract: A method of forming and a structure of an electronic device. The method including: forming a trench in a single-crystal semiconductor substrate; forming a dopant diffusion barrier layer on sidewalls and a bottom of the trench; and epitaxially growing a single-crystal semiconductor layer in the trench, the single-crystal semiconductor layer filling the trench, the dopant diffusion barrier layer a barrier to diffusion of semiconductor dopants. Also a power transistor formed by the same method.
    Type: Application
    Filed: July 6, 2006
    Publication date: January 10, 2008
    Applicant: INTERNATIONAL BUSINESS MACHINES CORPORATION
    Inventors: Brian Joseph Greene, Judson Robert Holt
  • Publication number: 20070258999
    Abstract: The invention provides, in part, the genomic sequence of a putative coronavirus, the SARS virus, and provides novel nucleic acid and amino acid sequences that may be used, for example, for the diagnosis, prophylaxis, or therapy of a variety of SARS virus related disorders.
    Type: Application
    Filed: April 28, 2004
    Publication date: November 8, 2007
    Applicant: THE PUBLIC HEALTH AGENCY OF CANADA
    Inventors: Frank Plummer, Heinz Feldmann, Steven Jones, Yan Li, Nathalie Bastien, Robert Brunham, Angela Brooks-Wilson, Robert Holt, Christopher Upton, Rachel Roper, Caroline Astell, Steven Jones
  • Publication number: 20070243617
    Abstract: The invention provides methods and compositions for assembling a modular replacement genome in a host microorganism. After such assembly, the host organism's genome is inactivated or ablated to permit full control of host cellular functions by the replacement genome. A modular replacement genome comprises an assembly of nucleic acid fragments, or segments, derived from one or more natural organisms or from synthetic polynucleotides or from a combination of both. Such an assembly, or set, of segments making up a replacement genome comprises a substantially complete set of genes and regulatory elements for carrying out minimal life functions under predefined culture conditions. The invention provides modular genomes having modules that are amenable to facile replacement, deletion, and/or additions.
    Type: Application
    Filed: October 12, 2006
    Publication date: October 18, 2007
    Inventor: Robert Holt
  • Publication number: 20070111163
    Abstract: A dental implant system comprises a dental implant, a first component, and a second component. The dental implant has a lower section for engaging bone, a middle section for passing through gingiva, and a top section with a first non-rotational feature. The first component has a larger width dimension than the implant such that a first lower portion of the first component surrounds the middle section of the implant. The first lower portion has a first scalloped lowermost end surface assisting to form the gingiva around the middle section of the implant. A second component attaches to the implant after the first component. The second component has a second lowermost portion with a second scalloped lowermost end surface that is substantially similar to the first scalloped lowermost end surface. The system may include a driver mechanism with a scalloped lowermost surface that helps to drive the implant into bone.
    Type: Application
    Filed: November 2, 2006
    Publication date: May 17, 2007
    Inventors: Theodore Powell, Michael Benner, Robert Holt
  • Publication number: 20070087366
    Abstract: The invention provides methods, kits, and compositions comprising novel mutant loxP sites. Such sites are particularly useful for procedures requiring multiple site-specific recombination reactions, including deletions or insertions of multiple genes or other sequences in the same organism, staged insertions or deletions of genes of the same organism at different times, assembly of large polynucleotide constructs by serial site-specific recombination, and the like. In one aspect, compositions of the invention includes particular mutant spacer oligonucleotides of loxP recombination elements, the recombination elements themselves, and pairs of non-promiscuous mutant loxP sites.
    Type: Application
    Filed: October 12, 2006
    Publication date: April 19, 2007
    Inventors: Robert Holt, Perseus Missirlis
  • Publication number: 20060212518
    Abstract: A method, apparatus, system, and signal-bearing medium that, in an embodiment, determine whether a user at a first client has a chat session already active at a second client with a third client in response to a request for initiation of a chat session for the user at the first client. If the user does already have a chat session active, the third client is notified that the first client replaces the second client in the chat session. Then chat data from the second client is copied to the first client, and a disconnect message is sent to the second client from first client. In various embodiments, the determination may be made by sending a query to a plurality of clients connected via a network or by sending a query to a server that serves the first client, the second client, and the third client. The copied chat data, which may include messages sent between the second client and the third client, is presented at the first client.
    Type: Application
    Filed: March 17, 2005
    Publication date: September 21, 2006
    Applicant: INTERNATIONAL BUSINESS MACHINES CORPORATION
    Inventors: Byron Bailey, Robert Holt, William Menoyo, Jason Nikolai
  • Publication number: 20060194297
    Abstract: A process is provided for the preparation of a compound of formula (1) wherein R and R? represent optionally substituted hydrocarbyl groups and X represents a hydrocarbyl linking group. The process comprises either the stereoselective reduction of the keto group in a dihydroxy keto precursor followed by selective esterification of a primary hydroxy, or selective esterification of a primary hydroxy of a dihydroxy keto precursor followed by stereoselective reduction of the keto group.
    Type: Application
    Filed: April 27, 2006
    Publication date: August 31, 2006
    Inventors: Andrew Blacker, Christopher Reeve, Robert Holt
  • Publication number: 20060073493
    Abstract: A method and computer-program product for sequencing nucleic acid sequences using restriction fragment maps derived from end-sequenced nucleotide fragments. The initial nucleotide sequence can be processed to form a shot-gun-data set. The present teachings employ a technique called Restriction Site Shotgun Sequencing (RSSS.) It can reduce the amount of overlap required between fragment ends while still producing a good assembly. A decrease in overlap can be achieved by using additional information in the fragments to assist in determining that two fragments overlap.
    Type: Application
    Filed: June 15, 2005
    Publication date: April 6, 2006
    Applicant: Applera Corporation
    Inventors: Daniel Fasulo, Robert Holt, Cheryl Evans, Jeannine Gocayne, Peter Li